RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 CYP2R1Q6VVX0 501 aa5.7□□□□□ -1.5
LTBR-212ENST00000543542 B3GNT6Q6ZMB0 384 aa5.7□□□□□ -1.5
LTBR-212ENST00000543542 ESPNLQ6ZVH7 1005 aa5.7□□□□□ -1.5
LTBR-212ENST00000543542 CBLL1Q75N03 491 aa5.7□□□□□ -1.5
LTBR-212ENST00000543542 FGD2Q7Z6J4 655 aa5.7□□□□□ -1.5
LTBR-212ENST00000543542 CYP4Z1Q86W10 505 aa5.7□□□□□ -1.5
LTBR-212ENST00000543542 DHFR2Q86XF0 187 aa5.7□□□□□ -1.5
LTBR-212ENST00000543542 DOLPP1Q86YN1 238 aa5.7□□□□□ -1.5
LTBR-212ENST00000543542 ULK2Q8IYT8 1036 aa5.7□□□□□ -1.5
LTBR-212ENST00000543542 GPR32P1Q8NGA4 272 aa5.7□□□□□ -1.5
LTBR-212ENST00000543542 POC1BQ8TC44 478 aa5.7□□□□□ -1.5
LTBR-212ENST00000543542 SLC25A43Q8WUT9 341 aaPredicted RBP5.7□□□□□ -1.5
LTBR-212ENST00000543542 GEMIN6Q8WXD5 167 aaKnown RBP5.7□□□□□ -1.5
LTBR-212ENST00000543542 SLC35B4Q969S0 331 aa5.7□□□□□ -1.5
LTBR-212ENST00000543542 CCDC124Q96CT7 223 aaKnown RBP5.7□□□□□ -1.5
LTBR-212ENST00000543542 DDIT4LQ96D03 193 aa5.7□□□□□ -1.5
LTBR-212ENST00000543542 ZHX1-C8orf76Q96EF9 292 aa5.7□□□□□ -1.5
LTBR-212ENST00000543542 DNAJA3Q96EY1 480 aa5.7□□□□□ -1.5
LTBR-212ENST00000543542 WDYHV1Q96HA8 205 aa5.7□□□□□ -1.5
LTBR-212ENST00000543542 HSH2DQ96JZ2 352 aa5.7□□□□□ -1.5
LTBR-212ENST00000543542 CLPTM1LQ96KA5 538 aa5.7□□□□□ -1.5
LTBR-212ENST00000543542 KLHL15Q96M94 604 aa5.7□□□□□ -1.5
LTBR-212ENST00000543542 OR5B2Q96R09 309 aa5.7□□□□□ -1.5
LTBR-212ENST00000543542 NPAS1Q99742 590 aa5.7□□□□□ -1.5
LTBR-212ENST00000543542 ARHGDIGQ99819 225 aa5.7□□□□□ -1.5
LTBR-212ENST00000543542 KLHDC3Q9BQ90 382 aa5.7□□□□□ -1.5
LTBR-212ENST00000543542 PRR14Q9BWN1 585 aa5.7□□□□□ -1.5
LTBR-212ENST00000543542 TRIM15Q9C019 465 aa5.7□□□□□ -1.5
LTBR-212ENST00000543542 PCDHAC1Q9H158 963 aa5.7□□□□□ -1.5
LTBR-212ENST00000543542 TIGARQ9NQ88 270 aa5.7□□□□□ -1.5
LTBR-212ENST00000543542 CHRNA9Q9UGM1 479 aa5.7□□□□□ -1.5
LTBR-212ENST00000543542 CD300AQ9UGN4 299 aa5.7□□□□□ -1.5
LTBR-212ENST00000543542 MCTS1Q9ULC4 181 aaKnown RBP5.7□□□□□ -1.5
LTBR-212ENST00000543542 SLC5A6Q9Y289 635 aa5.7□□□□□ -1.5
LTBR-212ENST00000543542 ZNF835Q9Y2P0 537 aa5.7□□□□□ -1.5
LTBR-212ENST00000543542 FAM32AQ9Y421 112 aaKnown RBP5.7□□□□□ -1.5
LTBR-212ENST00000543542 CACNA1GO43497 2377 aa5.7□□□□□ -1.5
LTBR-212ENST00000543542 SPENQ96T58 3664 aaKnown RBP5.69□□□□□ -1.5
LTBR-212ENST00000543542 SHANK1Q9Y566 2161 aa5.69□□□□□ -1.5
LTBR-212ENST00000543542 A0A1B0GWA3 101 aa5.69□□□□□ -1.5
LTBR-212ENST00000543542 A0A1W2PNR3 127 aa5.69□□□□□ -1.5
LTBR-212ENST00000543542 TMEM72A0PK05 275 aa5.69□□□□□ -1.5
LTBR-212ENST00000543542 CLCA1A8K7I4 914 aa5.69□□□□□ -1.5
LTBR-212ENST00000543542 FAAHO00519 579 aa5.69□□□□□ -1.5
LTBR-212ENST00000543542 ARPC2O15144 300 aa5.69□□□□□ -1.5
LTBR-212ENST00000543542 CXCL13O43927 109 aa5.69□□□□□ -1.5
LTBR-212ENST00000543542 ADAM11O75078 769 aa5.69□□□□□ -1.5
LTBR-212ENST00000543542 CIB2O75838 187 aa5.69□□□□□ -1.5
LTBR-212ENST00000543542 PLGP00747 810 aaPredicted RBP5.69□□□□□ -1.5
LTBR-212ENST00000543542 IL2RAP01589 272 aa5.69□□□□□ -1.5
LTBR-212ENST00000543542 STSP08842 583 aa5.69□□□□□ -1.5
LTBR-212ENST00000543542 HOXD4P09016 255 aaPredicted RBP5.69□□□□□ -1.5
LTBR-212ENST00000543542 PNMTP11086 282 aa5.69□□□□□ -1.5
LTBR-212ENST00000543542 CPN1P15169 458 aa5.69□□□□□ -1.5
LTBR-212ENST00000543542 ZNF708P17019 499 aa5.69□□□□□ -1.5
LTBR-212ENST00000543542 IL11P20809 199 aa5.69□□□□□ -1.5
LTBR-212ENST00000543542 FKBP2P26885 142 aaKnown RBP5.69□□□□□ -1.5
LTBR-212ENST00000543542 PTGER4P35408 488 aa5.69□□□□□ -1.5
LTBR-212ENST00000543542 ACAA2P42765 397 aaKnown RBP5.69□□□□□ -1.5
LTBR-212ENST00000543542 CA7P43166 264 aa5.69□□□□□ -1.5
LTBR-212ENST00000543542 YAP1P46937 504 aaKnown RBP5.69□□□□□ -1.5
LTBR-212ENST00000543542 SMSP52788 366 aa5.69□□□□□ -1.5
LTBR-212ENST00000543542 CLDN15P56746 228 aa5.69□□□□□ -1.5
LTBR-212ENST00000543542 CLDN18P56856 261 aa5.69□□□□□ -1.5
LTBR-212ENST00000543542 CLDN20P56880 219 aa5.69□□□□□ -1.5
LTBR-212ENST00000543542 CARD18P57730 90 aa5.69□□□□□ -1.5
LTBR-212ENST00000543542 OR2B6P58173 313 aa5.69□□□□□ -1.5
LTBR-212ENST00000543542 CSNK2A1P68400 391 aaPredicted RBP5.69□□□□□ -1.5
LTBR-212ENST00000543542 PLAURQ03405 335 aa5.69□□□□□ -1.5
LTBR-212ENST00000543542 PMPCAQ10713 525 aa5.69□□□□□ -1.5
LTBR-212ENST00000543542 TRIM25Q14258 630 aaKnown RBP5.69□□□□□ -1.5
LTBR-212ENST00000543542 NRF1Q16656 503 aa5.69□□□□□ -1.5
LTBR-212ENST00000543542 C4orf17Q53FE4 359 aa5.69□□□□□ -1.5
LTBR-212ENST00000543542 SYT14P1Q58G82 188 aa5.69□□□□□ -1.5
LTBR-212ENST00000543542 SLC25A53Q5H9E4 307 aa5.69□□□□□ -1.5
LTBR-212ENST00000543542 ENTPD8Q5MY95 495 aa5.69□□□□□ -1.5
LTBR-212ENST00000543542 MTFR2Q6P444 385 aa5.69□□□□□ -1.5
LTBR-212ENST00000543542 ULK3Q6PHR2 472 aa5.69□□□□□ -1.5
LTBR-212ENST00000543542 TTC33Q6PID6 262 aaPredicted RBP5.69□□□□□ -1.5
LTBR-212ENST00000543542 C6orf89Q6UWU4 347 aa5.69□□□□□ -1.5
LTBR-212ENST00000543542 RPTNQ6XPR3 784 aa5.69□□□□□ -1.5
LTBR-212ENST00000543542 Q6ZPB1 254 aaPredicted RBP5.69□□□□□ -1.5
LTBR-212ENST00000543542 VTCN1Q7Z7D3 282 aa5.69□□□□□ -1.5
LTBR-212ENST00000543542 RBM45Q8IUH3 476 aaKnown RBP5.69□□□□□ -1.5
LTBR-212ENST00000543542 LACC1Q8IV20 430 aa5.69□□□□□ -1.5
LTBR-212ENST00000543542 MCEMP1Q8IX19 187 aa5.69□□□□□ -1.5
LTBR-212ENST00000543542 C10orf53Q8N6V4 93 aa5.69□□□□□ -1.5
LTBR-212ENST00000543542 OR6T1Q8NGN1 323 aa5.69□□□□□ -1.5
LTBR-212ENST00000543542 OR2V1Q8NHB1 315 aa5.69□□□□□ -1.5
LTBR-212ENST00000543542 ZPLD1Q8TCW7 415 aa5.69□□□□□ -1.5
LTBR-212ENST00000543542 DNAJA4Q8WW22 397 aaPredicted RBP5.69□□□□□ -1.5
LTBR-212ENST00000543542 OSTF1Q92882 214 aa5.69□□□□□ -1.5
LTBR-212ENST00000543542 SLC7A6OSQ96CW6 309 aaPredicted RBP5.69□□□□□ -1.5
LTBR-212ENST00000543542 SLC47A1Q96FL8 570 aa5.69□□□□□ -1.5
LTBR-212ENST00000543542 SEPHS2Q99611 448 aa5.69□□□□□ -1.5
LTBR-212ENST00000543542 TUBA1CQ9BQE3 449 aa5.69□□□□□ -1.5
LTBR-212ENST00000543542 TAPBPLQ9BX59 468 aa5.69□□□□□ -1.5
LTBR-212ENST00000543542 PRDM14Q9GZV8 571 aa5.69□□□□□ -1.5
LTBR-212ENST00000543542 MUC13Q9H3R2 512 aa5.69□□□□□ -1.5
LTBR-212ENST00000543542 GORASP2Q9H8Y8 452 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms