RNA–Protein interactions for RNA: ENST00000543004.5

OTUB1-211, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 5 BASIC

Gene OTUB1, Length 1,647 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-211ENST00000543004 C7orf72A4D263 438 aa18.78■□□□□ 0.6
OTUB1-211ENST00000543004 H0YC42 278 aa18.78■□□□□ 0.6
OTUB1-211ENST00000543004 BMP7P18075 431 aa18.78■□□□□ 0.6
OTUB1-211ENST00000543004 SHC1P29353 583 aa18.78■□□□□ 0.6
OTUB1-211ENST00000543004 CDH12P55289 794 aa18.78■□□□□ 0.6
OTUB1-211ENST00000543004 TPD52P55327 224 aaPredicted RBP18.78■□□□□ 0.6
OTUB1-211ENST00000543004 C3AR1Q16581 482 aa18.78■□□□□ 0.6
OTUB1-211ENST00000543004 GLYR1Q49A26 553 aaPredicted RBP18.78■□□□□ 0.6
OTUB1-211ENST00000543004 GRINAQ7Z429 371 aa18.78■□□□□ 0.6
OTUB1-211ENST00000543004 ADGRG3Q86Y34 549 aa18.78■□□□□ 0.6
OTUB1-211ENST00000543004 SMPDL3BQ92485 455 aa18.78■□□□□ 0.6
OTUB1-211ENST00000543004 SLCO4A1Q96BD0 722 aa18.78■□□□□ 0.6
OTUB1-211ENST00000543004 DNAJA3Q96EY1 480 aa18.78■□□□□ 0.6
OTUB1-211ENST00000543004 RAB3IPQ96QF0 476 aaPredicted RBP18.78■□□□□ 0.6
OTUB1-211ENST00000543004 UGT2B28Q9BY64 529 aa18.78■□□□□ 0.6
OTUB1-211ENST00000543004 EVA1AQ9H8M9 152 aa18.78■□□□□ 0.6
OTUB1-211ENST00000543004 TMEM27Q9HBJ8 222 aa18.78■□□□□ 0.6
OTUB1-211ENST00000543004 A4GNTQ9UNA3 340 aa18.78■□□□□ 0.6
OTUB1-211ENST00000543004 AURKCQ9UQB9 309 aa18.78■□□□□ 0.6
OTUB1-211ENST00000543004 NBASA2RRP1 2371 aa18.78■□□□□ 0.6
OTUB1-211ENST00000543004 A0A0B4J2E0 115 aa18.78■□□□□ 0.6
OTUB1-211ENST00000543004 A0A1B0GX12 115 aa18.78■□□□□ 0.6
OTUB1-211ENST00000543004 DHRS12A0PJE2 317 aa18.78■□□□□ 0.6
OTUB1-211ENST00000543004 FMO6PO60774 539 aa18.78■□□□□ 0.6
OTUB1-211ENST00000543004 LYPD3O95274 346 aa18.78■□□□□ 0.6
OTUB1-211ENST00000543004 ZNF17P17021 662 aa18.78■□□□□ 0.6
OTUB1-211ENST00000543004 EIF1P41567 113 aaKnown RBP18.78■□□□□ 0.6
OTUB1-211ENST00000543004 DLX5P56178 289 aa18.78■□□□□ 0.6
OTUB1-211ENST00000543004 RNF217Q8TC41 542 aa18.78■□□□□ 0.6
OTUB1-211ENST00000543004 DENND2DQ9H6A0 471 aaPredicted RBP18.78■□□□□ 0.6
OTUB1-211ENST00000543004 RPS6KB2Q9UBS0 482 aa18.78■□□□□ 0.6
OTUB1-211ENST00000543004 ENPP4Q9Y6X5 453 aa18.78■□□□□ 0.6
OTUB1-211ENST00000543004 RELNP78509 3460 aa18.78■□□□□ 0.6
OTUB1-211ENST00000543004 TMED7-TICAM2A0A0A6YYA0 188 aa18.77■□□□□ 0.6
OTUB1-211ENST00000543004 A0A1B0GVC2 190 aa18.77■□□□□ 0.6
OTUB1-211ENST00000543004 SUSD5O60279 629 aa18.77■□□□□ 0.6
OTUB1-211ENST00000543004 HCN1O60741 890 aa18.77■□□□□ 0.6
OTUB1-211ENST00000543004 ALG10BQ5I7T1 473 aa18.77■□□□□ 0.6
OTUB1-211ENST00000543004 WDR88Q6ZMY6 472 aa18.77■□□□□ 0.6
OTUB1-211ENST00000543004 PRICKLE2Q7Z3G6 844 aa18.77■□□□□ 0.6
OTUB1-211ENST00000543004 GDF7Q7Z4P5 450 aa18.77■□□□□ 0.6
OTUB1-211ENST00000543004 ATG4DQ86TL0 474 aaPredicted RBP18.77■□□□□ 0.6
OTUB1-211ENST00000543004 ZDHHC21Q8IVQ6 265 aa18.77■□□□□ 0.6
OTUB1-211ENST00000543004 ABTB1Q969K4 478 aaPredicted RBP18.77■□□□□ 0.6
OTUB1-211ENST00000543004 ZNF300Q96RE9 604 aaPredicted RBP18.77■□□□□ 0.6
OTUB1-211ENST00000543004 IL1RAPQ9NPH3 570 aa18.77■□□□□ 0.6
OTUB1-211ENST00000543004 SLC7A7Q9UM01 511 aa18.77■□□□□ 0.6
OTUB1-211ENST00000543004 TMED7Q9Y3B3 224 aa18.77■□□□□ 0.6
OTUB1-211ENST00000543004 TMEM72A0PK05 275 aa18.76■□□□□ 0.59
OTUB1-211ENST00000543004 B8ZZF3 427 aa18.76■□□□□ 0.59
OTUB1-211ENST00000543004 NPIPA2E9PIF3 369 aa18.76■□□□□ 0.59
OTUB1-211ENST00000543004 NPIPA3F8WFD2 350 aa18.76■□□□□ 0.59
OTUB1-211ENST00000543004 PRSS23O95084 383 aa18.76■□□□□ 0.59
OTUB1-211ENST00000543004 FABP3P05413 133 aa18.76■□□□□ 0.59
OTUB1-211ENST00000543004 ADH6P28332 368 aa18.76■□□□□ 0.59
OTUB1-211ENST00000543004 LHX2P50458 406 aa18.76■□□□□ 0.59
OTUB1-211ENST00000543004 POLR2HP52434 150 aaKnown RBP18.76■□□□□ 0.59
OTUB1-211ENST00000543004 CLDN20P56880 219 aa18.76■□□□□ 0.59
OTUB1-211ENST00000543004 TAS2R41P59536 307 aa18.76■□□□□ 0.59
OTUB1-211ENST00000543004 CRYZQ08257 329 aaKnown RBP18.76■□□□□ 0.59
OTUB1-211ENST00000543004 C19orf57Q0VDD7 668 aa18.76■□□□□ 0.59
OTUB1-211ENST00000543004 KRTCAP3Q53RY4 240 aa18.76■□□□□ 0.59
OTUB1-211ENST00000543004 VASNQ6EMK4 673 aa18.76■□□□□ 0.59
OTUB1-211ENST00000543004 P3H2Q8IVL5 708 aa18.76■□□□□ 0.59
OTUB1-211ENST00000543004 UBQLNLQ8IYU4 475 aa18.76■□□□□ 0.59
OTUB1-211ENST00000543004 LILRA2Q8N149 483 aa18.76■□□□□ 0.59
OTUB1-211ENST00000543004 GHDCQ8N2G8 530 aa18.76■□□□□ 0.59
OTUB1-211ENST00000543004 DTNBP1Q96EV8 351 aa18.76■□□□□ 0.59
OTUB1-211ENST00000543004 SLC41A3Q96GZ6 507 aa18.76■□□□□ 0.59
OTUB1-211ENST00000543004 TIMP4Q99727 224 aa18.76■□□□□ 0.59
OTUB1-211ENST00000543004 OR11A1Q9GZK7 315 aa18.76■□□□□ 0.59
OTUB1-211ENST00000543004 RIMS3Q9UJD0 308 aa18.76■□□□□ 0.59
OTUB1-211ENST00000543004 ZC3H12DA2A288 527 aaKnown RBP18.75■□□□□ 0.59
OTUB1-211ENST00000543004 TRAPPC13A5PLN9 417 aa18.75■□□□□ 0.59
OTUB1-211ENST00000543004 AQP7O14520 342 aa18.75■□□□□ 0.59
OTUB1-211ENST00000543004 RRP9O43818 475 aaKnown RBP18.75■□□□□ 0.59
OTUB1-211ENST00000543004 CHMP24386 653 aa18.75■□□□□ 0.59
OTUB1-211ENST00000543004 SFTPDP35247 375 aa18.75■□□□□ 0.59
OTUB1-211ENST00000543004 APOBEC1P41238 236 aaKnown RBP18.75■□□□□ 0.59
OTUB1-211ENST00000543004 SUCLG1P53597 346 aaKnown RBP18.75■□□□□ 0.59
OTUB1-211ENST00000543004 CLDN15P56746 228 aa18.75■□□□□ 0.59
OTUB1-211ENST00000543004 ACTR3P61158 418 aa18.75■□□□□ 0.59
OTUB1-211ENST00000543004 CHRNB3Q05901 458 aa18.75■□□□□ 0.59
OTUB1-211ENST00000543004 FAM98BQ52LJ0 330 aaKnown RBP18.75■□□□□ 0.59
OTUB1-211ENST00000543004 NHSL2Q5HYW2 709 aa18.75■□□□□ 0.59
OTUB1-211ENST00000543004 ARHGAP11AQ6P4F7 1023 aa18.75■□□□□ 0.59
OTUB1-211ENST00000543004 AAGABQ6PD74 315 aa18.75■□□□□ 0.59
OTUB1-211ENST00000543004 ZNF613Q6PF04 617 aa18.75■□□□□ 0.59
OTUB1-211ENST00000543004 ULK3Q6PHR2 472 aa18.75■□□□□ 0.59
OTUB1-211ENST00000543004 GFRALQ6UXV0 394 aa18.75■□□□□ 0.59
OTUB1-211ENST00000543004 ZNF771Q7L3S4 317 aaPredicted RBP18.75■□□□□ 0.59
OTUB1-211ENST00000543004 RSRC1Q96IZ7 334 aaKnown RBP18.75■□□□□ 0.59
OTUB1-211ENST00000543004 PRRC1Q96M27 445 aa18.75■□□□□ 0.59
OTUB1-211ENST00000543004 PRSS27Q9BQR3 290 aa18.75■□□□□ 0.59
OTUB1-211ENST00000543004 MAGIXQ9H6Y5 334 aa18.75■□□□□ 0.59
OTUB1-211ENST00000543004 RP1L1Q8IWN7 2480 aaPredicted RBP18.75■□□□□ 0.59
OTUB1-211ENST00000543004 SEC14L5O43304 696 aa18.74■□□□□ 0.59
OTUB1-211ENST00000543004 POU3F2P20265 443 aaPredicted RBP18.74■□□□□ 0.59
OTUB1-211ENST00000543004 MAGEA2P43356 314 aa18.74■□□□□ 0.59
OTUB1-211ENST00000543004 CLDN18P56856 261 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms