RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 IQCCQ4KMZ1 466 aa20.91■□□□□ 0.94
HOMER3-205ENST00000542541 KRTCAP3Q53RY4 240 aa20.91■□□□□ 0.94
HOMER3-205ENST00000542541 RNF217Q8TC41 542 aa20.91■□□□□ 0.94
HOMER3-205ENST00000542541 POC1BQ8TC44 478 aa20.91■□□□□ 0.94
HOMER3-205ENST00000542541 SLCO4A1Q96BD0 722 aa20.91■□□□□ 0.94
HOMER3-205ENST00000542541 C3orf49Q96BT1 292 aa20.91■□□□□ 0.94
HOMER3-205ENST00000542541 SNRNP40Q96DI7 357 aaKnown RBP20.91■□□□□ 0.94
HOMER3-205ENST00000542541 SLC41A3Q96GZ6 507 aa20.91■□□□□ 0.94
HOMER3-205ENST00000542541 ARMC1Q9NVT9 282 aa20.91■□□□□ 0.94
HOMER3-205ENST00000542541 OSGIN1Q9UJX0 560 aa20.91■□□□□ 0.94
HOMER3-205ENST00000542541 ACAD8Q9UKU7 415 aa20.91■□□□□ 0.94
HOMER3-205ENST00000542541 HEATR5AQ86XA9 2040 aa20.91■□□□□ 0.94
HOMER3-205ENST00000542541 OR2M5A3KFT3 312 aa20.9■□□□□ 0.94
HOMER3-205ENST00000542541 SUSD5O60279 629 aa20.9■□□□□ 0.94
HOMER3-205ENST00000542541 ENTPD5O75356 428 aa20.9■□□□□ 0.94
HOMER3-205ENST00000542541 FKBP2P26885 142 aaKnown RBP20.9■□□□□ 0.94
HOMER3-205ENST00000542541 CDH12P55289 794 aa20.9■□□□□ 0.94
HOMER3-205ENST00000542541 SMIM11AP58511 58 aa20.9■□□□□ 0.94
HOMER3-205ENST00000542541 NEIL3Q8TAT5 605 aa20.9■□□□□ 0.94
HOMER3-205ENST00000542541 STMN2Q93045 179 aa20.9■□□□□ 0.94
HOMER3-205ENST00000542541 SLC38A4Q969I6 547 aa20.9■□□□□ 0.94
HOMER3-205ENST00000542541 MPP4Q96JB8 637 aa20.9■□□□□ 0.94
HOMER3-205ENST00000542541 TSPAN10Q9H1Z9 355 aaPredicted RBP20.9■□□□□ 0.94
HOMER3-205ENST00000542541 SLC6A15Q9H2J7 730 aa20.9■□□□□ 0.94
HOMER3-205ENST00000542541 SPIN1Q9Y657 262 aaPredicted RBP20.9■□□□□ 0.94
HOMER3-205ENST00000542541 ELOA3DA6NLF2 546 aaPredicted RBP20.89■□□□□ 0.94
HOMER3-205ENST00000542541 J3KTA2 159 aa20.89■□□□□ 0.94
HOMER3-205ENST00000542541 HNRNPRO43390 633 aaKnown RBP20.89■□□□□ 0.94
HOMER3-205ENST00000542541 CHP2O43745 196 aa20.89■□□□□ 0.94
HOMER3-205ENST00000542541 MT-ND1P03886 318 aa20.89■□□□□ 0.94
HOMER3-205ENST00000542541 ELOA3BQ3SY89 546 aa20.89■□□□□ 0.94
HOMER3-205ENST00000542541 COLEC12Q5KU26 742 aa20.89■□□□□ 0.94
HOMER3-205ENST00000542541 ZNF324BQ6AW86 544 aaPredicted RBP20.89■□□□□ 0.94
HOMER3-205ENST00000542541 GDF7Q7Z4P5 450 aa20.89■□□□□ 0.94
HOMER3-205ENST00000542541 ATG4DQ86TL0 474 aaPredicted RBP20.89■□□□□ 0.94
HOMER3-205ENST00000542541 OFCC1Q8IZS5 231 aa20.89■□□□□ 0.94
HOMER3-205ENST00000542541 ELOA3Q8NG57 546 aa20.89■□□□□ 0.94
HOMER3-205ENST00000542541 OR5M1Q8NGP8 315 aa20.89■□□□□ 0.94
HOMER3-205ENST00000542541 SLC7A7Q9UM01 511 aa20.89■□□□□ 0.94
HOMER3-205ENST00000542541 SPTA1P02549 2419 aa20.89■□□□□ 0.93
HOMER3-205ENST00000542541 TMED7-TICAM2A0A0A6YYA0 188 aa20.89■□□□□ 0.93
HOMER3-205ENST00000542541 SHISA8B8ZZ34 492 aa20.89■□□□□ 0.93
HOMER3-205ENST00000542541 FFAR1O14842 300 aa20.89■□□□□ 0.93
HOMER3-205ENST00000542541 DIRAS1O95057 198 aa20.89■□□□□ 0.93
HOMER3-205ENST00000542541 ACTL6AO96019 429 aa20.89■□□□□ 0.93
HOMER3-205ENST00000542541 GFRA1P56159 465 aa20.89■□□□□ 0.93
HOMER3-205ENST00000542541 B3GALT5-AS1P59052 145 aa20.89■□□□□ 0.93
HOMER3-205ENST00000542541 FOXK1P85037 733 aa20.89■□□□□ 0.93
HOMER3-205ENST00000542541 SELENBP1Q13228 472 aa20.89■□□□□ 0.93
HOMER3-205ENST00000542541 POMZP3Q6PJE2 187 aa20.89■□□□□ 0.93
HOMER3-205ENST00000542541 TRILQ7L0X0 811 aa20.89■□□□□ 0.93
HOMER3-205ENST00000542541 TSPYL5Q86VY4 417 aaPredicted RBP20.89■□□□□ 0.93
HOMER3-205ENST00000542541 ADGRG3Q86Y34 549 aa20.89■□□□□ 0.93
HOMER3-205ENST00000542541 ANKRD19PQ9H560 264 aa20.89■□□□□ 0.93
HOMER3-205ENST00000542541 NMNAT1Q9HAN9 279 aaPredicted RBP20.89■□□□□ 0.93
HOMER3-205ENST00000542541 CHRNA9Q9UGM1 479 aa20.89■□□□□ 0.93
HOMER3-205ENST00000542541 SLC6A5Q9Y345 797 aa20.89■□□□□ 0.93
HOMER3-205ENST00000542541 TMED7Q9Y3B3 224 aa20.89■□□□□ 0.93
HOMER3-205ENST00000542541 A0A1B0GVC2 190 aa20.88■□□□□ 0.93
HOMER3-205ENST00000542541 H0YHG0 523 aa20.88■□□□□ 0.93
HOMER3-205ENST00000542541 ADAMDEC1O15204 470 aa20.88■□□□□ 0.93
HOMER3-205ENST00000542541 KRT36O76013 467 aa20.88■□□□□ 0.93
HOMER3-205ENST00000542541 PRSS23O95084 383 aa20.88■□□□□ 0.93
HOMER3-205ENST00000542541 CST1P01037 141 aa20.88■□□□□ 0.93
HOMER3-205ENST00000542541 H1F0P07305 194 aaKnown RBP20.88■□□□□ 0.93
HOMER3-205ENST00000542541 FCGR1AP12314 374 aa20.88■□□□□ 0.93
HOMER3-205ENST00000542541 TRAM2Q15035 370 aa20.88■□□□□ 0.93
HOMER3-205ENST00000542541 C3orf33Q6P1S2 294 aa20.88■□□□□ 0.93
HOMER3-205ENST00000542541 PIK3C3Q8NEB9 887 aa20.88■□□□□ 0.93
HOMER3-205ENST00000542541 SLC25A43Q8WUT9 341 aaPredicted RBP20.88■□□□□ 0.93
HOMER3-205ENST00000542541 PYDC1Q8WXC3 89 aa20.88■□□□□ 0.93
HOMER3-205ENST00000542541 GPR137Q96N19 417 aa20.88■□□□□ 0.93
HOMER3-205ENST00000542541 NPAS1Q99742 590 aa20.88■□□□□ 0.93
HOMER3-205ENST00000542541 PLSCR2Q9NRY7 297 aa20.88■□□□□ 0.93
HOMER3-205ENST00000542541 ZNF337Q9Y3M9 751 aa20.88■□□□□ 0.93
HOMER3-205ENST00000542541 AP4B1Q9Y6B7 739 aa20.88■□□□□ 0.93
HOMER3-205ENST00000542541 CHD6Q8TD26 2715 aa20.87■□□□□ 0.93
HOMER3-205ENST00000542541 A0A087WUJ7 227 aa20.87■□□□□ 0.93
HOMER3-205ENST00000542541 GNGT2O14610 69 aa20.87■□□□□ 0.93
HOMER3-205ENST00000542541 RAC1P63000 192 aa20.87■□□□□ 0.93
HOMER3-205ENST00000542541 NHSL2Q5HYW2 709 aa20.87■□□□□ 0.93
HOMER3-205ENST00000542541 OR2T5Q6IEZ7 315 aa20.87■□□□□ 0.93
HOMER3-205ENST00000542541 ARHGAP11AQ6P4F7 1023 aa20.87■□□□□ 0.93
HOMER3-205ENST00000542541 GHDCQ8N2G8 530 aa20.87■□□□□ 0.93
HOMER3-205ENST00000542541 OR2T29Q8NH02 315 aa20.87■□□□□ 0.93
HOMER3-205ENST00000542541 ABTB1Q969K4 478 aaPredicted RBP20.87■□□□□ 0.93
HOMER3-205ENST00000542541 HS6ST2Q96MM7 605 aa20.87■□□□□ 0.93
HOMER3-205ENST00000542541 BARD1Q99728 777 aaKnown RBP20.87■□□□□ 0.93
HOMER3-205ENST00000542541 ASF1BQ9NVP2 202 aa20.87■□□□□ 0.93
HOMER3-205ENST00000542541 RHCGQ9UBD6 479 aa20.87■□□□□ 0.93
HOMER3-205ENST00000542541 TESMINQ9Y4I5 508 aa20.87■□□□□ 0.93
HOMER3-205ENST00000542541 SPENQ96T58 3664 aaKnown RBP20.87■□□□□ 0.93
HOMER3-205ENST00000542541 PCNX3Q9H6A9 2034 aa20.87■□□□□ 0.93
HOMER3-205ENST00000542541 A0A1W2PRQ8 180 aa20.86■□□□□ 0.93
HOMER3-205ENST00000542541 GJE1A6NN92 205 aa20.86■□□□□ 0.93
HOMER3-205ENST00000542541 ZNF208O43345 1280 aa20.86■□□□□ 0.93
HOMER3-205ENST00000542541 GADD45GO95257 159 aa20.86■□□□□ 0.93
HOMER3-205ENST00000542541 THY1P04216 161 aa20.86■□□□□ 0.93
HOMER3-205ENST00000542541 SPIBQ01892 262 aa20.86■□□□□ 0.93
HOMER3-205ENST00000542541 DGCR6Q14129 220 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms