RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 TNFRSF18Q9Y5U5 241 aa4.95□□□□□ -1.62
DDB1-219ENST00000541513 ETV7Q9Y603 341 aa4.95□□□□□ -1.62
DDB1-219ENST00000541513 SPIN1Q9Y657 262 aaPredicted RBP4.95□□□□□ -1.62
DDB1-219ENST00000541513 SCN1AP35498 2009 aa4.95□□□□□ -1.62
DDB1-219ENST00000541513 BRWD1Q9NSI6 2320 aa4.95□□□□□ -1.62
DDB1-219ENST00000541513 SH3PXD2BA1X283 911 aa4.94□□□□□ -1.62
DDB1-219ENST00000541513 FBLL1A6NHQ2 334 aaKnown RBP4.94□□□□□ -1.62
DDB1-219ENST00000541513 ARGFXA6NJG6 315 aa4.94□□□□□ -1.62
DDB1-219ENST00000541513 YJEFN3A6XGL0 299 aa4.94□□□□□ -1.62
DDB1-219ENST00000541513 A8MUA0 341 aa4.94□□□□□ -1.62
DDB1-219ENST00000541513 E5RGE8 158 aa4.94□□□□□ -1.62
DDB1-219ENST00000541513 C1QTNF3-AMACRE9PGA6 284 aa4.94□□□□□ -1.62
DDB1-219ENST00000541513 TEX46H3BTG2 121 aa4.94□□□□□ -1.62
DDB1-219ENST00000541513 GPR171O14626 319 aa4.94□□□□□ -1.62
DDB1-219ENST00000541513 B4GALT5O43286 388 aa4.94□□□□□ -1.62
DDB1-219ENST00000541513 NCR1O76036 304 aa4.94□□□□□ -1.62
DDB1-219ENST00000541513 PLAUP00749 431 aa4.94□□□□□ -1.62
DDB1-219ENST00000541513 TGFB1P01137 390 aa4.94□□□□□ -1.62
DDB1-219ENST00000541513 ADRB1P08588 477 aa4.94□□□□□ -1.62
DDB1-219ENST00000541513 HSMCR30P0CW71 290 aa4.94□□□□□ -1.62
DDB1-219ENST00000541513 NDUFB7P17568 137 aa4.94□□□□□ -1.62
DDB1-219ENST00000541513 TACR3P29371 465 aa4.94□□□□□ -1.62
DDB1-219ENST00000541513 PIGAP37287 484 aa4.94□□□□□ -1.62
DDB1-219ENST00000541513 EFNB2P52799 333 aa4.94□□□□□ -1.62
DDB1-219ENST00000541513 ART1P52961 327 aa4.94□□□□□ -1.62
DDB1-219ENST00000541513 CLDN17P56750 224 aa4.94□□□□□ -1.62
DDB1-219ENST00000541513 PITX1P78337 314 aaPredicted RBP4.94□□□□□ -1.62
DDB1-219ENST00000541513 OGDHQ02218 1023 aa4.94□□□□□ -1.62
DDB1-219ENST00000541513 SCRN3Q0VDG4 424 aa4.94□□□□□ -1.62
DDB1-219ENST00000541513 SNTA1Q13424 505 aa4.94□□□□□ -1.62
DDB1-219ENST00000541513 PEX6Q13608 980 aa4.94□□□□□ -1.62
DDB1-219ENST00000541513 CAPRIN1Q14444 709 aaKnown RBP4.94□□□□□ -1.62
DDB1-219ENST00000541513 SF3B4Q15427 424 aaKnown RBP eCLIP4.94□□□□□ -1.628e-9■■■■□ 23.9
DDB1-219ENST00000541513 SHHQ15465 462 aa4.94□□□□□ -1.62
DDB1-219ENST00000541513 LSM12Q3MHD2 195 aaKnown RBP4.94□□□□□ -1.62
DDB1-219ENST00000541513 GGTA1PQ4G0N0 100 aa4.94□□□□□ -1.62
DDB1-219ENST00000541513 TIGD2Q4W5G0 525 aa4.94□□□□□ -1.62
DDB1-219ENST00000541513 LGSNQ5TDP6 509 aa4.94□□□□□ -1.62
DDB1-219ENST00000541513 SLX4IPQ5VYV7 408 aa4.94□□□□□ -1.62
DDB1-219ENST00000541513 NADSYN1Q6IA69 706 aa4.94□□□□□ -1.62
DDB1-219ENST00000541513 ZNF425Q6IV72 752 aa4.94□□□□□ -1.62
DDB1-219ENST00000541513 SLC8B1Q6J4K2 584 aa4.94□□□□□ -1.62
DDB1-219ENST00000541513 MPZL3Q6UWV2 235 aa4.94□□□□□ -1.62
DDB1-219ENST00000541513 DPY19L2P2Q6ZN68 376 aa4.94□□□□□ -1.62
DDB1-219ENST00000541513 SLC35D2Q76EJ3 337 aa4.94□□□□□ -1.62
DDB1-219ENST00000541513 MRPL21Q7Z2W9 205 aaKnown RBP4.94□□□□□ -1.62
DDB1-219ENST00000541513 COX8CQ7Z4L0 72 aa4.94□□□□□ -1.62
DDB1-219ENST00000541513 DCXRQ7Z4W1 244 aa4.94□□□□□ -1.62
DDB1-219ENST00000541513 ABHD12BQ7Z5M8 362 aaPredicted RBP4.94□□□□□ -1.62
DDB1-219ENST00000541513 GPSM1Q86YR5 675 aa4.94□□□□□ -1.62
DDB1-219ENST00000541513 TP53INP2Q8IXH6 220 aa4.94□□□□□ -1.62
DDB1-219ENST00000541513 TBC1D19Q8N5T2 526 aa4.94□□□□□ -1.62
DDB1-219ENST00000541513 ARFGAP1Q8N6T3 406 aa4.94□□□□□ -1.62
DDB1-219ENST00000541513 SNX31Q8N9S9 440 aa4.94□□□□□ -1.62
DDB1-219ENST00000541513 TMEM104Q8NE00 496 aa4.94□□□□□ -1.62
DDB1-219ENST00000541513 ACVR1CQ8NER5 493 aa4.94□□□□□ -1.62
DDB1-219ENST00000541513 OR5T1Q8NG75 326 aa4.94□□□□□ -1.62
DDB1-219ENST00000541513 OR13J1Q8NGT2 312 aa4.94□□□□□ -1.62
DDB1-219ENST00000541513 OR10Z1Q8NGY1 313 aa4.94□□□□□ -1.62
DDB1-219ENST00000541513 FGFBP3Q8TAT2 258 aa4.94□□□□□ -1.62
DDB1-219ENST00000541513 FANK1Q8TC84 345 aa4.94□□□□□ -1.62
DDB1-219ENST00000541513 TMEM174Q8WUU8 243 aa4.94□□□□□ -1.62
DDB1-219ENST00000541513 CAPSLQ8WWF8 208 aa4.94□□□□□ -1.62
DDB1-219ENST00000541513 IFT81Q8WYA0 676 aa4.94□□□□□ -1.62
DDB1-219ENST00000541513 ADIPOR1Q96A54 375 aa4.94□□□□□ -1.62
DDB1-219ENST00000541513 C8orf44Q96CB5 159 aa4.94□□□□□ -1.62
DDB1-219ENST00000541513 CCDC124Q96CT7 223 aaKnown RBP4.94□□□□□ -1.62
DDB1-219ENST00000541513 ECHDC3Q96DC8 303 aa4.94□□□□□ -1.62
DDB1-219ENST00000541513 ZNF419Q96HQ0 510 aaPredicted RBP4.94□□□□□ -1.62
DDB1-219ENST00000541513 CPB2Q96IY4 423 aa4.94□□□□□ -1.62
DDB1-219ENST00000541513 PDLIM2Q96JY6 352 aa4.94□□□□□ -1.62
DDB1-219ENST00000541513 DPH7Q9BTV6 452 aa4.94□□□□□ -1.62
DDB1-219ENST00000541513 EFHD1Q9BUP0 239 aa4.94□□□□□ -1.62
DDB1-219ENST00000541513 BDH2Q9BUT1 245 aa4.94□□□□□ -1.62
DDB1-219ENST00000541513 HINT2Q9BX68 163 aa4.94□□□□□ -1.62
DDB1-219ENST00000541513 NLNQ9BYT8 704 aa4.94□□□□□ -1.62
DDB1-219ENST00000541513 FAM107BQ9H098 131 aa4.94□□□□□ -1.62
DDB1-219ENST00000541513 AKIP1Q9NQ31 210 aa4.94□□□□□ -1.62
DDB1-219ENST00000541513 ZNF446Q9NWS9 450 aa4.94□□□□□ -1.62
DDB1-219ENST00000541513 MIOSQ9NXC5 875 aa4.94□□□□□ -1.62
DDB1-219ENST00000541513 TECRQ9NZ01 308 aaKnown RBP4.94□□□□□ -1.62
DDB1-219ENST00000541513 PSMD13Q9UNM6 376 aa4.94□□□□□ -1.62
DDB1-219ENST00000541513 LAMP3Q9UQV4 416 aa4.94□□□□□ -1.62
DDB1-219ENST00000541513 NSG2Q9Y328 171 aa4.94□□□□□ -1.62
DDB1-219ENST00000541513 SAMHD1Q9Y3Z3 626 aaKnown RBP4.94□□□□□ -1.62
DDB1-219ENST00000541513 ZNF175Q9Y473 711 aa4.94□□□□□ -1.62
DDB1-219ENST00000541513 YIPF1Q9Y548 306 aa4.94□□□□□ -1.62
DDB1-219ENST00000541513 STYXL1Q9Y6J8 313 aa4.94□□□□□ -1.62
DDB1-219ENST00000541513 ATG2AQ2TAZ0 1938 aa4.93□□□□□ -1.62
DDB1-219ENST00000541513 KCNE1BA0A087WTH5 132 aa4.93□□□□□ -1.62
DDB1-219ENST00000541513 SLC22A23A1A5C7 686 aa4.93□□□□□ -1.62
DDB1-219ENST00000541513 A8MXQ7 604 aa4.93□□□□□ -1.62
DDB1-219ENST00000541513 ZNF99A8MXY4 864 aaPredicted RBP4.93□□□□□ -1.62
DDB1-219ENST00000541513 E9PQ18 207 aa4.93□□□□□ -1.62
DDB1-219ENST00000541513 RHODO00212 210 aa4.93□□□□□ -1.62
DDB1-219ENST00000541513 OR7A17O14581 309 aa4.93□□□□□ -1.62
DDB1-219ENST00000541513 PAX4O43316 350 aa4.93□□□□□ -1.62
DDB1-219ENST00000541513 CCNB2O95067 398 aa4.93□□□□□ -1.62
DDB1-219ENST00000541513 SNAPINO95295 136 aa4.93□□□□□ -1.62
DDB1-219ENST00000541513 GJB5O95377 273 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms