RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 BAG2O95816 211 aa8.46□□□□□ -1.06
DDX55-208ENST00000541259 CST1P01037 141 aa8.46□□□□□ -1.06
DDX55-208ENST00000541259 GP1BBP13224 206 aa8.46□□□□□ -1.06
DDX55-208ENST00000541259 PRKCAP17252 672 aa8.46□□□□□ -1.06
DDX55-208ENST00000541259 HK1P19367 917 aa8.46□□□□□ -1.06
DDX55-208ENST00000541259 ELAVL4P26378 380 aaKnown RBP8.46□□□□□ -1.06
DDX55-208ENST00000541259 DPP4P27487 766 aa8.46□□□□□ -1.06
DDX55-208ENST00000541259 GDF1P27539 372 aa8.46□□□□□ -1.06
DDX55-208ENST00000541259 RRM2P31350 389 aa8.46□□□□□ -1.06
DDX55-208ENST00000541259 SLC1A3P43003 542 aa8.46□□□□□ -1.06
DDX55-208ENST00000541259 MAGEA5P43359 124 aa8.46□□□□□ -1.06
DDX55-208ENST00000541259 ZNF41P51814 821 aaPredicted RBP8.46□□□□□ -1.06
DDX55-208ENST00000541259 IST1P53990 364 aa8.46□□□□□ -1.06
DDX55-208ENST00000541259 SUMO3P55854 103 aaPredicted RBP8.46□□□□□ -1.06
DDX55-208ENST00000541259 COPZ1P61923 177 aa8.46□□□□□ -1.06
DDX55-208ENST00000541259 PPIAP62937 165 aaKnown RBP8.46□□□□□ -1.06
DDX55-208ENST00000541259 SPIBQ01892 262 aa8.46□□□□□ -1.06
DDX55-208ENST00000541259 PLGLB1Q02325 96 aa8.46□□□□□ -1.06
DDX55-208ENST00000541259 FOXF1Q12946 379 aa8.46□□□□□ -1.06
DDX55-208ENST00000541259 RCN1Q15293 331 aa8.46□□□□□ -1.06
DDX55-208ENST00000541259 TOMM20Q15388 145 aa8.46□□□□□ -1.06
DDX55-208ENST00000541259 PLPPR5Q32ZL2 321 aa8.46□□□□□ -1.06
DDX55-208ENST00000541259 SLC6A19Q695T7 634 aa8.46□□□□□ -1.06
DDX55-208ENST00000541259 WBP2NLQ6ICG8 309 aa8.46□□□□□ -1.06
DDX55-208ENST00000541259 OR2T5Q6IEZ7 315 aa8.46□□□□□ -1.06
DDX55-208ENST00000541259 ZFP1Q6P2D0 407 aa8.46□□□□□ -1.06
DDX55-208ENST00000541259 POMZP3Q6PJE2 187 aa8.46□□□□□ -1.06
DDX55-208ENST00000541259 WDR88Q6ZMY6 472 aa8.46□□□□□ -1.06
DDX55-208ENST00000541259 YRDCQ86U90 279 aaKnown RBP8.46□□□□□ -1.06
DDX55-208ENST00000541259 CYP4Z1Q86W10 505 aa8.46□□□□□ -1.06
DDX55-208ENST00000541259 NKAIN4Q8IVV8 208 aa8.46□□□□□ -1.06
DDX55-208ENST00000541259 C10orf67Q8IYJ2 551 aa8.46□□□□□ -1.06
DDX55-208ENST00000541259 TMEM251Q8N6I4 163 aa8.46□□□□□ -1.06
DDX55-208ENST00000541259 LSMEM1Q8N8F7 131 aa8.46□□□□□ -1.06
DDX55-208ENST00000541259 ZFP62Q8NB50 900 aaPredicted RBP8.46□□□□□ -1.06
DDX55-208ENST00000541259 PIK3C3Q8NEB9 887 aa8.46□□□□□ -1.06
DDX55-208ENST00000541259 OR2T29Q8NH02 315 aa8.46□□□□□ -1.06
DDX55-208ENST00000541259 OR52J3Q8NH60 311 aa8.46□□□□□ -1.06
DDX55-208ENST00000541259 RELTQ969Z4 430 aa8.46□□□□□ -1.06
DDX55-208ENST00000541259 C3orf49Q96BT1 292 aa8.46□□□□□ -1.06
DDX55-208ENST00000541259 SLC41A3Q96GZ6 507 aa8.46□□□□□ -1.06
DDX55-208ENST00000541259 PRRC1Q96M27 445 aa8.46□□□□□ -1.06
DDX55-208ENST00000541259 TAAR6Q96RI8 345 aa8.46□□□□□ -1.06
DDX55-208ENST00000541259 UBL7Q96S82 380 aaPredicted RBP8.46□□□□□ -1.06
DDX55-208ENST00000541259 BARD1Q99728 777 aaKnown RBP8.46□□□□□ -1.06
DDX55-208ENST00000541259 PIP5K1AQ99755 562 aa8.46□□□□□ -1.06
DDX55-208ENST00000541259 PRSS27Q9BQR3 290 aa8.46□□□□□ -1.06
DDX55-208ENST00000541259 FNDC11Q9BVV2 318 aa8.46□□□□□ -1.06
DDX55-208ENST00000541259 ADAM19Q9H013 955 aa8.46□□□□□ -1.06
DDX55-208ENST00000541259 ADNPQ9H2P0 1102 aa8.46□□□□□ -1.06
DDX55-208ENST00000541259 UBQLN3Q9H347 655 aa8.46□□□□□ -1.06
DDX55-208ENST00000541259 ZNF703Q9H7S9 590 aaPredicted RBP8.46□□□□□ -1.06
DDX55-208ENST00000541259 PTGES2Q9H7Z7 377 aa8.46□□□□□ -1.06
DDX55-208ENST00000541259 NMNAT1Q9HAN9 279 aaPredicted RBP8.46□□□□□ -1.06
DDX55-208ENST00000541259 NTN4Q9HB63 628 aa8.46□□□□□ -1.06
DDX55-208ENST00000541259 AGPAT4Q9NRZ5 378 aa8.46□□□□□ -1.06
DDX55-208ENST00000541259 MAN2C1Q9NTJ4 1040 aa8.46□□□□□ -1.06
DDX55-208ENST00000541259 ACER3Q9NUN7 267 aa8.46□□□□□ -1.06
DDX55-208ENST00000541259 RPS6KB2Q9UBS0 482 aa8.46□□□□□ -1.06
DDX55-208ENST00000541259 TUBD1Q9UJT1 453 aa8.46□□□□□ -1.06
DDX55-208ENST00000541259 DKKL1Q9UK85 242 aa8.46□□□□□ -1.06
DDX55-208ENST00000541259 SLC7A7Q9UM01 511 aa8.46□□□□□ -1.06
DDX55-208ENST00000541259 B3GNT3Q9Y2A9 372 aa8.46□□□□□ -1.06
DDX55-208ENST00000541259 RPH3AQ9Y2J0 694 aaPredicted RBP8.46□□□□□ -1.06
DDX55-208ENST00000541259 FAM32AQ9Y421 112 aaKnown RBP8.46□□□□□ -1.06
DDX55-208ENST00000541259 TRBV4-1A0A0J9YWV2 114 aa8.45□□□□□ -1.06
DDX55-208ENST00000541259 TRAPPC13A5PLN9 417 aa8.45□□□□□ -1.06
DDX55-208ENST00000541259 ETV2O00321 342 aaPredicted RBP8.45□□□□□ -1.06
DDX55-208ENST00000541259 TRAPPC6AO75865 159 aa8.45□□□□□ -1.06
DDX55-208ENST00000541259 OPN1LWP04000 364 aa8.45□□□□□ -1.06
DDX55-208ENST00000541259 ANPEPP15144 967 aa8.45□□□□□ -1.06
DDX55-208ENST00000541259 ITGA2P17301 1181 aa8.45□□□□□ -1.06
DDX55-208ENST00000541259 CCNA2P20248 432 aa8.45□□□□□ -1.06
DDX55-208ENST00000541259 IL11P20809 199 aa8.45□□□□□ -1.06
DDX55-208ENST00000541259 FASP25445 335 aa8.45□□□□□ -1.06
DDX55-208ENST00000541259 TACR3P29371 465 aa8.45□□□□□ -1.06
DDX55-208ENST00000541259 SRD5A2P31213 254 aa8.45□□□□□ -1.06
DDX55-208ENST00000541259 DSCR4P56555 118 aaPredicted RBP8.45□□□□□ -1.06
DDX55-208ENST00000541259 B3GALT5-AS1P59052 145 aa8.45□□□□□ -1.06
DDX55-208ENST00000541259 MERTKQ12866 999 aa8.45□□□□□ -1.06
DDX55-208ENST00000541259 LY6DQ14210 128 aa8.45□□□□□ -1.06
DDX55-208ENST00000541259 SEC23BQ15437 767 aa8.45□□□□□ -1.06
DDX55-208ENST00000541259 ATP6AP1Q15904 470 aa8.45□□□□□ -1.06
DDX55-208ENST00000541259 EXOC3L2Q2M3D2 409 aa8.45□□□□□ -1.06
DDX55-208ENST00000541259 HYAL4Q2M3T9 481 aa8.45□□□□□ -1.06
DDX55-208ENST00000541259 TMEM44Q2T9K0 475 aa8.45□□□□□ -1.06
DDX55-208ENST00000541259 ALG10BQ5I7T1 473 aa8.45□□□□□ -1.06
DDX55-208ENST00000541259 WIPI1Q5MNZ9 446 aaPredicted RBP8.45□□□□□ -1.06
DDX55-208ENST00000541259 ZNF613Q6PF04 617 aa8.45□□□□□ -1.06
DDX55-208ENST00000541259 ULK3Q6PHR2 472 aa8.45□□□□□ -1.06
DDX55-208ENST00000541259 TBPL2Q6SJ96 375 aa8.45□□□□□ -1.06
DDX55-208ENST00000541259 ATG4DQ86TL0 474 aaPredicted RBP8.45□□□□□ -1.06
DDX55-208ENST00000541259 ADGRG3Q86Y34 549 aa8.45□□□□□ -1.06
DDX55-208ENST00000541259 P3H2Q8IVL5 708 aa8.45□□□□□ -1.06
DDX55-208ENST00000541259 OFCC1Q8IZS5 231 aa8.45□□□□□ -1.06
DDX55-208ENST00000541259 Q8NA96 180 aa8.45□□□□□ -1.06
DDX55-208ENST00000541259 FAM83FQ8NEG4 500 aaPredicted RBP8.45□□□□□ -1.06
DDX55-208ENST00000541259 OR4C15Q8NGM1 316 aa8.45□□□□□ -1.06
DDX55-208ENST00000541259 DHRS1Q96LJ7 313 aa8.45□□□□□ -1.06
DDX55-208ENST00000541259 ZNF347Q96SE7 839 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms