RNA–Protein interactions for RNA: ENST00000541102.1

LTBR-209, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5 BASIC

Gene LTBR, Length 1,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-209ENST00000541102 PCGF2P35227 344 aa12.78□□□□□ -0.36
LTBR-209ENST00000541102 PGM1P36871 562 aa12.78□□□□□ -0.36
LTBR-209ENST00000541102 PEX19P40855 299 aa12.78□□□□□ -0.36
LTBR-209ENST00000541102 EIF1AXP47813 144 aaKnown RBP12.78□□□□□ -0.36
LTBR-209ENST00000541102 PCBP3P57721 371 aaKnown RBP12.78□□□□□ -0.36
LTBR-209ENST00000541102 SIRPAP78324 504 aa12.78□□□□□ -0.36
LTBR-209ENST00000541102 HPCAP84074 193 aa12.78□□□□□ -0.36
LTBR-209ENST00000541102 LIPEQ05469 1076 aa12.78□□□□□ -0.36
LTBR-209ENST00000541102 FGFBP1Q14512 234 aa12.78□□□□□ -0.36
LTBR-209ENST00000541102 PON3Q15166 354 aa12.78□□□□□ -0.36
LTBR-209ENST00000541102 TOMM34Q15785 309 aaPredicted RBP12.78□□□□□ -0.36
LTBR-209ENST00000541102 OR2A2Q6IF42 318 aa12.78□□□□□ -0.36
LTBR-209ENST00000541102 REEP3Q6NUK4 255 aa12.78□□□□□ -0.36
LTBR-209ENST00000541102 ZNF836Q6ZNA1 936 aa12.78□□□□□ -0.36
LTBR-209ENST00000541102 CDH24Q86UP0 819 aa12.78□□□□□ -0.36
LTBR-209ENST00000541102 CLIP4Q8N3C7 705 aa12.78□□□□□ -0.36
LTBR-209ENST00000541102 GTPBP8Q8N3Z3 284 aaPredicted RBP12.78□□□□□ -0.36
LTBR-209ENST00000541102 RNF148Q8N7C7 305 aa12.78□□□□□ -0.36
LTBR-209ENST00000541102 OR52P1PQ8NH57 321 aa12.78□□□□□ -0.36
LTBR-209ENST00000541102 FNDC9Q8TBE3 224 aa12.78□□□□□ -0.36
LTBR-209ENST00000541102 ZBTB8AQ96BR9 441 aa12.78□□□□□ -0.36
LTBR-209ENST00000541102 RNF145Q96MT1 663 aa12.78□□□□□ -0.36
LTBR-209ENST00000541102 WFDC6Q9BQY6 131 aa12.78□□□□□ -0.36
LTBR-209ENST00000541102 PRRG4Q9BZD6 226 aa12.78□□□□□ -0.36
LTBR-209ENST00000541102 DNAJB12Q9NXW2 375 aaKnown RBP12.78□□□□□ -0.36
LTBR-209ENST00000541102 ICAM5Q9UMF0 924 aa12.78□□□□□ -0.36
LTBR-209ENST00000541102 TACC2O95359 2948 aa12.78□□□□□ -0.36
LTBR-209ENST00000541102 AKAP6Q13023 2319 aa12.77□□□□□ -0.36
LTBR-209ENST00000541102 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.77□□□□□ -0.37
LTBR-209ENST00000541102 B2RBV5 119 aa12.77□□□□□ -0.37
LTBR-209ENST00000541102 TPST1O60507 370 aa12.77□□□□□ -0.37
LTBR-209ENST00000541102 TNFSF13O75888 250 aa12.77□□□□□ -0.37
LTBR-209ENST00000541102 CSTAP01040 98 aa12.77□□□□□ -0.37
LTBR-209ENST00000541102 OPN1SWP03999 348 aa12.77□□□□□ -0.37
LTBR-209ENST00000541102 UBTFL6P0CB48 400 aaPredicted RBP12.77□□□□□ -0.37
LTBR-209ENST00000541102 UBL4AP11441 157 aa12.77□□□□□ -0.37
LTBR-209ENST00000541102 ZNF17P17021 662 aa12.77□□□□□ -0.37
LTBR-209ENST00000541102 GSK3BP49841 420 aa12.77□□□□□ -0.37
LTBR-209ENST00000541102 EEF1A1P68104 462 aaKnown RBP12.77□□□□□ -0.37
LTBR-209ENST00000541102 KCNJ10P78508 379 aa12.77□□□□□ -0.37
LTBR-209ENST00000541102 DMTNQ08495 405 aa12.77□□□□□ -0.37
LTBR-209ENST00000541102 VMACQ2NL98 169 aa12.77□□□□□ -0.37
LTBR-209ENST00000541102 PLPPR5Q32ZL2 321 aa12.77□□□□□ -0.37
LTBR-209ENST00000541102 GLIPR1L2Q4G1C9 344 aa12.77□□□□□ -0.37
LTBR-209ENST00000541102 MRPL2Q5T653 305 aaKnown RBP12.77□□□□□ -0.37
LTBR-209ENST00000541102 EEF1A1P5Q5VTE0 462 aa12.77□□□□□ -0.37
LTBR-209ENST00000541102 MTERF4Q7Z6M4 381 aaKnown RBP12.77□□□□□ -0.37
LTBR-209ENST00000541102 GGNQ86UU5 652 aa12.77□□□□□ -0.37
LTBR-209ENST00000541102 C11orf65Q8NCR3 313 aa12.77□□□□□ -0.37
LTBR-209ENST00000541102 FAM156AQ8NDB6 213 aa12.77□□□□□ -0.37
LTBR-209ENST00000541102 RBM15BQ8NDT2 890 aaKnown RBP12.77□□□□□ -0.37
LTBR-209ENST00000541102 HIPK4Q8NE63 616 aa12.77□□□□□ -0.37
LTBR-209ENST00000541102 FAM71CQ8NEG0 241 aa12.77□□□□□ -0.37
LTBR-209ENST00000541102 POC1BQ8TC44 478 aa12.77□□□□□ -0.37
LTBR-209ENST00000541102 FAM222BQ8WU58 562 aa12.77□□□□□ -0.37
LTBR-209ENST00000541102 NRGNQ92686 78 aa12.77□□□□□ -0.37
LTBR-209ENST00000541102 HOPXQ9BPY8 73 aaPredicted RBP12.77□□□□□ -0.37
LTBR-209ENST00000541102 POLDIP3Q9BY77 421 aaKnown RBP12.77□□□□□ -0.37
LTBR-209ENST00000541102 PIGMQ9H3S5 423 aa12.77□□□□□ -0.37
LTBR-209ENST00000541102 CALML5Q9NZT1 146 aa12.77□□□□□ -0.37
LTBR-209ENST00000541102 TMEM181Q9P2C4 612 aa12.77□□□□□ -0.37
LTBR-209ENST00000541102 ABCD2Q9UBJ2 740 aa12.77□□□□□ -0.37
LTBR-209ENST00000541102 ZNF443Q9Y2A4 671 aaPredicted RBP12.77□□□□□ -0.37
LTBR-209ENST00000541102 ZNF175Q9Y473 711 aa12.77□□□□□ -0.37
LTBR-209ENST00000541102 GPC6Q9Y625 555 aaPredicted RBP12.77□□□□□ -0.37
LTBR-209ENST00000541102 TMEM247A6NEH6 219 aa12.76□□□□□ -0.37
LTBR-209ENST00000541102 PRORSD1PA6NEY8 169 aa12.76□□□□□ -0.37
LTBR-209ENST00000541102 A8MXE2 369 aa12.76□□□□□ -0.37
LTBR-209ENST00000541102 FAM220BPB1ANY3 271 aa12.76□□□□□ -0.37
LTBR-209ENST00000541102 TMEM229AB2RXF0 380 aa12.76□□□□□ -0.37
LTBR-209ENST00000541102 C5orf58C9J3I9 102 aa12.76□□□□□ -0.37
LTBR-209ENST00000541102 AP3D1O14617 1153 aa12.76□□□□□ -0.37
LTBR-209ENST00000541102 FRS3O43559 492 aa12.76□□□□□ -0.37
LTBR-209ENST00000541102 CXCL13O43927 109 aa12.76□□□□□ -0.37
LTBR-209ENST00000541102 CTAG2O75638 210 aa12.76□□□□□ -0.37
LTBR-209ENST00000541102 CYP7B1O75881 506 aa12.76□□□□□ -0.37
LTBR-209ENST00000541102 PABPC4LP0CB38 370 aaKnown RBP12.76□□□□□ -0.37
LTBR-209ENST00000541102 GKN3PP0CG01 181 aa12.76□□□□□ -0.37
LTBR-209ENST00000541102 PRG2P13727 222 aa12.76□□□□□ -0.37
LTBR-209ENST00000541102 NID1P14543 1247 aa12.76□□□□□ -0.37
LTBR-209ENST00000541102 IL11P20809 199 aa12.76□□□□□ -0.37
LTBR-209ENST00000541102 ME2P23368 584 aa12.76□□□□□ -0.37
LTBR-209ENST00000541102 PSMA4P25789 261 aaKnown RBP12.76□□□□□ -0.37
LTBR-209ENST00000541102 P2RX1P51575 399 aa12.76□□□□□ -0.37
LTBR-209ENST00000541102 CCR4P51679 360 aa12.76□□□□□ -0.37
LTBR-209ENST00000541102 RAC1P63000 192 aa12.76□□□□□ -0.37
LTBR-209ENST00000541102 PRAMEF8Q5VWM4 474 aa12.76□□□□□ -0.37
LTBR-209ENST00000541102 PRAMEF7Q5VXH5 474 aa12.76□□□□□ -0.37
LTBR-209ENST00000541102 VWA1Q6PCB0 445 aa12.76□□□□□ -0.37
LTBR-209ENST00000541102 BTLAQ7Z6A9 289 aa12.76□□□□□ -0.37
LTBR-209ENST00000541102 PEX5LQ8IYB4 626 aa12.76□□□□□ -0.37
LTBR-209ENST00000541102 DEFB107AQ8IZN7 70 aa12.76□□□□□ -0.37
LTBR-209ENST00000541102 TMCO5AQ8N6Q1 288 aa12.76□□□□□ -0.37
LTBR-209ENST00000541102 METTL25Q8N6Q8 603 aa12.76□□□□□ -0.37
LTBR-209ENST00000541102 ATP6V1C2Q8NEY4 427 aa12.76□□□□□ -0.37
LTBR-209ENST00000541102 OR10D3Q8NH80 312 aa12.76□□□□□ -0.37
LTBR-209ENST00000541102 BBS10Q8TAM1 723 aa12.76□□□□□ -0.37
LTBR-209ENST00000541102 WDR60Q8WVS4 1066 aa12.76□□□□□ -0.37
LTBR-209ENST00000541102 TAMM41Q96BW9 452 aa12.76□□□□□ -0.37
LTBR-209ENST00000541102 STARD4Q96DR4 205 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms