RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 PDP1Q9P0J1 537 aaPredicted RBP9.65□□□□□ -0.86
ATL3-204ENST00000540699 RHCGQ9UBD6 479 aa9.65□□□□□ -0.86
ATL3-204ENST00000540699 MRTO4Q9UKD2 239 aaKnown RBP9.65□□□□□ -0.86
ATL3-204ENST00000540699 SLC13A4Q9UKG4 626 aa9.65□□□□□ -0.86
ATL3-204ENST00000540699 NOTCH2Q04721 2471 aa9.65□□□□□ -0.86
ATL3-204ENST00000540699 ITPR2Q14571 2701 aa9.64□□□□□ -0.87
ATL3-204ENST00000540699 PINLYPA6NC86 204 aa9.64□□□□□ -0.87
ATL3-204ENST00000540699 SERINC4A6NH21 518 aa9.64□□□□□ -0.87
ATL3-204ENST00000540699 TTLL8A6PVC2 850 aa9.64□□□□□ -0.87
ATL3-204ENST00000540699 HS6ST1O60243 411 aa9.64□□□□□ -0.87
ATL3-204ENST00000540699 FADS1O60427 444 aa9.64□□□□□ -0.87
ATL3-204ENST00000540699 TRIM3O75382 744 aaPredicted RBP9.64□□□□□ -0.87
ATL3-204ENST00000540699 SNX4O95219 450 aa9.64□□□□□ -0.87
ATL3-204ENST00000540699 OR5F1O95221 314 aa9.64□□□□□ -0.87
ATL3-204ENST00000540699 LYPD3O95274 346 aa9.64□□□□□ -0.87
ATL3-204ENST00000540699 UTS2O95399 124 aa9.64□□□□□ -0.87
ATL3-204ENST00000540699 OXSR1O95747 527 aaPredicted RBP9.64□□□□□ -0.87
ATL3-204ENST00000540699 THY1P04216 161 aa9.64□□□□□ -0.87
ATL3-204ENST00000540699 P04436 131 aa9.64□□□□□ -0.87
ATL3-204ENST00000540699 CYP4B1P13584 511 aa9.64□□□□□ -0.87
ATL3-204ENST00000540699 PRG2P13727 222 aa9.64□□□□□ -0.87
ATL3-204ENST00000540699 CBLP22681 906 aa9.64□□□□□ -0.87
ATL3-204ENST00000540699 IGFBP5P24593 272 aa9.64□□□□□ -0.87
ATL3-204ENST00000540699 HTR2AP28223 471 aa9.64□□□□□ -0.87
ATL3-204ENST00000540699 IL12BP29460 328 aa9.64□□□□□ -0.87
ATL3-204ENST00000540699 KRT20P35900 424 aa9.64□□□□□ -0.87
ATL3-204ENST00000540699 CAPGP40121 348 aa9.64□□□□□ -0.87
ATL3-204ENST00000540699 ADH7P40394 386 aa9.64□□□□□ -0.87
ATL3-204ENST00000540699 CASP3P42574 277 aa9.64□□□□□ -0.87
ATL3-204ENST00000540699 MEOX1P50221 254 aa9.64□□□□□ -0.87
ATL3-204ENST00000540699 TDGF1P3P51864 188 aa9.64□□□□□ -0.87
ATL3-204ENST00000540699 GAS1P54826 345 aa9.64□□□□□ -0.87
ATL3-204ENST00000540699 SMIM11AP58511 58 aa9.64□□□□□ -0.87
ATL3-204ENST00000540699 PMP22Q01453 160 aa9.64□□□□□ -0.87
ATL3-204ENST00000540699 EPS8Q12929 822 aa9.64□□□□□ -0.87
ATL3-204ENST00000540699 SEC23BQ15437 767 aa9.64□□□□□ -0.87
ATL3-204ENST00000540699 RFX4Q33E94 735 aa9.64□□□□□ -0.87
ATL3-204ENST00000540699 ENTPD8Q5MY95 495 aa9.64□□□□□ -0.87
ATL3-204ENST00000540699 DESI1Q6ICB0 168 aa9.64□□□□□ -0.87
ATL3-204ENST00000540699 SLC30A6Q6NXT4 461 aa9.64□□□□□ -0.87
ATL3-204ENST00000540699 USP51Q70EK9 711 aa9.64□□□□□ -0.87
ATL3-204ENST00000540699 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.64□□□□□ -0.87
ATL3-204ENST00000540699 SIAH3Q8IW03 269 aa9.64□□□□□ -0.87
ATL3-204ENST00000540699 FAM98AQ8NCA5 519 aaKnown RBP9.64□□□□□ -0.87
ATL3-204ENST00000540699 OR9Q2Q8NGE9 314 aa9.64□□□□□ -0.87
ATL3-204ENST00000540699 OR4C3Q8NH37 302 aa9.64□□□□□ -0.87
ATL3-204ENST00000540699 OR52J3Q8NH60 311 aa9.64□□□□□ -0.87
ATL3-204ENST00000540699 CPT1CQ8TCG5 803 aa9.64□□□□□ -0.87
ATL3-204ENST00000540699 FAR1Q8WVX9 515 aa9.64□□□□□ -0.87
ATL3-204ENST00000540699 CNOT9Q92600 299 aaKnown RBP9.64□□□□□ -0.87
ATL3-204ENST00000540699 ALPK1Q96QP1 1244 aa9.64□□□□□ -0.87
ATL3-204ENST00000540699 MCHR1Q99705 422 aa9.64□□□□□ -0.87
ATL3-204ENST00000540699 SLX1AQ9BQ83 275 aa9.64□□□□□ -0.87
ATL3-204ENST00000540699 PRR14Q9BWN1 585 aa9.64□□□□□ -0.87
ATL3-204ENST00000540699 HOXD1Q9GZZ0 328 aa9.64□□□□□ -0.87
ATL3-204ENST00000540699 TOR3AQ9H497 397 aa9.64□□□□□ -0.87
ATL3-204ENST00000540699 Q9H521 79 aa9.64□□□□□ -0.87
ATL3-204ENST00000540699 ANKRD19PQ9H560 264 aa9.64□□□□□ -0.87
ATL3-204ENST00000540699 ARMC7Q9H6L4 198 aa9.64□□□□□ -0.87
ATL3-204ENST00000540699 ASF1BQ9NVP2 202 aa9.64□□□□□ -0.87
ATL3-204ENST00000540699 TESQ9UGI8 421 aaKnown RBP9.64□□□□□ -0.87
ATL3-204ENST00000540699 HEATR5AQ86XA9 2040 aa9.63□□□□□ -0.87
ATL3-204ENST00000540699 SH3PXD2BA1X283 911 aa9.63□□□□□ -0.87
ATL3-204ENST00000540699 LRRC3CA6NJW4 275 aa9.63□□□□□ -0.87
ATL3-204ENST00000540699 H0YAE9 185 aa9.63□□□□□ -0.87
ATL3-204ENST00000540699 FAAHO00519 579 aa9.63□□□□□ -0.87
ATL3-204ENST00000540699 AP3D1O14617 1153 aa9.63□□□□□ -0.87
ATL3-204ENST00000540699 MITFO75030 526 aaPredicted RBP9.63□□□□□ -0.87
ATL3-204ENST00000540699 ADAM11O75078 769 aa9.63□□□□□ -0.87
ATL3-204ENST00000540699 CCNB2O95067 398 aa9.63□□□□□ -0.87
ATL3-204ENST00000540699 CRYABP02511 175 aaKnown RBP9.63□□□□□ -0.87
ATL3-204ENST00000540699 GKN3PP0CG01 181 aa9.63□□□□□ -0.87
ATL3-204ENST00000540699 ANXA8P13928 327 aa9.63□□□□□ -0.87
ATL3-204ENST00000540699 TBXA2RP21731 343 aa9.63□□□□□ -0.87
ATL3-204ENST00000540699 ACAA2P42765 397 aaKnown RBP9.63□□□□□ -0.87
ATL3-204ENST00000540699 DNASE1L1P49184 302 aa9.63□□□□□ -0.87
ATL3-204ENST00000540699 RNF144AP50876 292 aaPredicted RBP9.63□□□□□ -0.87
ATL3-204ENST00000540699 GPR85P60893 370 aa9.63□□□□□ -0.87
ATL3-204ENST00000540699 HOXC5Q00444 222 aa9.63□□□□□ -0.87
ATL3-204ENST00000540699 MED21Q13503 144 aa9.63□□□□□ -0.87
ATL3-204ENST00000540699 RNFT1Q5M7Z0 435 aa9.63□□□□□ -0.87
ATL3-204ENST00000540699 BICRALQ6AI39 1079 aa9.63□□□□□ -0.87
ATL3-204ENST00000540699 FAM180AQ6UWF9 173 aa9.63□□□□□ -0.87
ATL3-204ENST00000540699 APOOLQ6UXV4 268 aa9.63□□□□□ -0.87
ATL3-204ENST00000540699 PLEKHM3Q6ZWE6 761 aa9.63□□□□□ -0.87
ATL3-204ENST00000540699 RANBP3LQ86VV4 465 aaPredicted RBP9.63□□□□□ -0.87
ATL3-204ENST00000540699 ATCAYQ86WG3 371 aa9.63□□□□□ -0.87
ATL3-204ENST00000540699 DHRSXQ8N5I4 330 aa9.63□□□□□ -0.87
ATL3-204ENST00000540699 OR5M3Q8NGP4 307 aa9.63□□□□□ -0.87
ATL3-204ENST00000540699 SLC7A13Q8TCU3 470 aa9.63□□□□□ -0.87
ATL3-204ENST00000540699 TMCO6Q96DC7 493 aa9.63□□□□□ -0.87
ATL3-204ENST00000540699 TMEM41AQ96HV5 264 aa9.63□□□□□ -0.87
ATL3-204ENST00000540699 FEVQ99581 238 aa9.63□□□□□ -0.87
ATL3-204ENST00000540699 FNDC11Q9BVV2 318 aa9.63□□□□□ -0.87
ATL3-204ENST00000540699 GABARAPL3Q9BY60 117 aa9.63□□□□□ -0.87
ATL3-204ENST00000540699 UBQLN4Q9NRR5 601 aa9.63□□□□□ -0.87
ATL3-204ENST00000540699 TUBA8Q9NY65 449 aaPredicted RBP9.63□□□□□ -0.87
ATL3-204ENST00000540699 UBAP1Q9NZ09 502 aa9.63□□□□□ -0.87
ATL3-204ENST00000540699 SLC35A3Q9Y2D2 325 aa9.63□□□□□ -0.87
ATL3-204ENST00000540699 CELSR2Q9HCU4 2923 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms