RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 PLA1AQ53H76 456 aa8.09□□□□□ -1.11
DDB1-217ENST00000540166 REEP3Q6NUK4 255 aa8.09□□□□□ -1.11
DDB1-217ENST00000540166 DHRS13Q6UX07 377 aa8.09□□□□□ -1.11
DDB1-217ENST00000540166 SSX9Q7RTT3 188 aa8.09□□□□□ -1.11
DDB1-217ENST00000540166 LRRC70Q7Z2Q7 622 aa8.09□□□□□ -1.11
DDB1-217ENST00000540166 TMPRSS11BQ86T26 416 aa8.09□□□□□ -1.11
DDB1-217ENST00000540166 SFTPA1Q8IWL2 248 aa8.09□□□□□ -1.11
DDB1-217ENST00000540166 NRSN1Q8IZ57 195 aa8.09□□□□□ -1.11
DDB1-217ENST00000540166 RAB7BQ96AH8 199 aa8.09□□□□□ -1.11
DDB1-217ENST00000540166 KCTD12Q96CX2 325 aaKnown RBP8.09□□□□□ -1.11
DDB1-217ENST00000540166 DUSP23Q9BVJ7 150 aa8.09□□□□□ -1.11
DDB1-217ENST00000540166 FZD3Q9NPG1 666 aa8.09□□□□□ -1.11
DDB1-217ENST00000540166 RCE1Q9Y256 329 aa8.09□□□□□ -1.11
DDB1-217ENST00000540166 AUP1Q9Y679 476 aa8.09□□□□□ -1.11
DDB1-217ENST00000540166 SCAMP1O15126 338 aa8.09□□□□□ -1.11
DDB1-217ENST00000540166 SEC14L5O43304 696 aa8.09□□□□□ -1.11
DDB1-217ENST00000540166 LILRB5O75023 590 aa8.09□□□□□ -1.11
DDB1-217ENST00000540166 HLA-DQB1P01920 261 aa8.09□□□□□ -1.11
DDB1-217ENST00000540166 C8GP07360 202 aa8.09□□□□□ -1.11
DDB1-217ENST00000540166 GIPP09681 153 aaPredicted RBP8.09□□□□□ -1.11
DDB1-217ENST00000540166 ACP2P11117 423 aa8.09□□□□□ -1.11
DDB1-217ENST00000540166 HOXB3P14651 431 aaPredicted RBP8.09□□□□□ -1.11
DDB1-217ENST00000540166 GSTM3P21266 225 aa8.09□□□□□ -1.11
DDB1-217ENST00000540166 ACRV1P26436 265 aa8.09□□□□□ -1.11
DDB1-217ENST00000540166 CTSOP43234 321 aaPredicted RBP8.09□□□□□ -1.11
DDB1-217ENST00000540166 PREPP48147 710 aa8.09□□□□□ -1.11
DDB1-217ENST00000540166 GIPRP48546 466 aa8.09□□□□□ -1.11
DDB1-217ENST00000540166 ATXN7L3Q14CW9 347 aaPredicted RBP8.09□□□□□ -1.11
DDB1-217ENST00000540166 FAM69AQ5T7M9 428 aa8.09□□□□□ -1.11
DDB1-217ENST00000540166 C19orf48Q6RUI8 117 aa8.09□□□□□ -1.11
DDB1-217ENST00000540166 CEACAM20Q6UY09 585 aa8.09□□□□□ -1.11
DDB1-217ENST00000540166 GKN2Q86XP6 184 aa8.09□□□□□ -1.11
DDB1-217ENST00000540166 FBXO15Q8NCQ5 510 aaPredicted RBP8.09□□□□□ -1.11
DDB1-217ENST00000540166 OR51G2Q8NGK0 314 aa8.09□□□□□ -1.11
DDB1-217ENST00000540166 GABRG3Q99928 467 aa8.09□□□□□ -1.11
DDB1-217ENST00000540166 SLC17A9Q9BYT1 436 aa8.09□□□□□ -1.11
DDB1-217ENST00000540166 HEXA-AS1Q9H8Q6 139 aa8.09□□□□□ -1.11
DDB1-217ENST00000540166 NOX3Q9HBY0 568 aa8.09□□□□□ -1.11
DDB1-217ENST00000540166 SLC22A11Q9NSA0 550 aa8.09□□□□□ -1.11
DDB1-217ENST00000540166 MBD1Q9UIS9 605 aaPredicted RBP8.09□□□□□ -1.11
DDB1-217ENST00000540166 GPR160Q9UJ42 338 aa8.09□□□□□ -1.11
DDB1-217ENST00000540166 F5H5P2 479 aa8.09□□□□□ -1.12
DDB1-217ENST00000540166 ZNF593O00488 134 aaPredicted RBP8.09□□□□□ -1.12
DDB1-217ENST00000540166 NRG2O14511 850 aaPredicted RBP8.09□□□□□ -1.12
DDB1-217ENST00000540166 TSPAN6O43657 245 aa8.09□□□□□ -1.12
DDB1-217ENST00000540166 FARS2O95363 451 aaKnown RBP8.09□□□□□ -1.12
DDB1-217ENST00000540166 SOD1P00441 154 aa8.09□□□□□ -1.12
DDB1-217ENST00000540166 SULT1A3P0DMM9 295 aa8.09□□□□□ -1.12
DDB1-217ENST00000540166 SULT1A4P0DMN0 295 aa8.09□□□□□ -1.12
DDB1-217ENST00000540166 AMD1P17707 334 aa8.09□□□□□ -1.12
DDB1-217ENST00000540166 GZMMP51124 257 aa8.09□□□□□ -1.12
DDB1-217ENST00000540166 AGFG1P52594 562 aaKnown RBP8.09□□□□□ -1.12
DDB1-217ENST00000540166 TAS2R41P59536 307 aa8.09□□□□□ -1.12
DDB1-217ENST00000540166 PDZK1IP1Q13113 114 aa8.09□□□□□ -1.12
DDB1-217ENST00000540166 C1orf61Q13536 156 aa8.09□□□□□ -1.12
DDB1-217ENST00000540166 ELOCQ15369 112 aa8.09□□□□□ -1.12
DDB1-217ENST00000540166 GSG1Q2KHT4 349 aa8.09□□□□□ -1.12
DDB1-217ENST00000540166 MPEG1Q2M385 716 aa8.09□□□□□ -1.12
DDB1-217ENST00000540166 PHF19Q5T6S3 580 aa8.09□□□□□ -1.12
DDB1-217ENST00000540166 C18orf63Q68DL7 685 aa8.09□□□□□ -1.12
DDB1-217ENST00000540166 RGS7BPQ6MZT1 257 aaPredicted RBP8.09□□□□□ -1.12
DDB1-217ENST00000540166 FAM122BQ7Z309 247 aa8.09□□□□□ -1.12
DDB1-217ENST00000540166 STOML3Q8TAV4 291 aa8.09□□□□□ -1.12
DDB1-217ENST00000540166 SPRYD4Q8WW59 207 aaPredicted RBP8.09□□□□□ -1.12
DDB1-217ENST00000540166 CMSS1Q9BQ75 279 aaKnown RBP8.09□□□□□ -1.12
DDB1-217ENST00000540166 RDH14Q9HBH5 336 aa8.09□□□□□ -1.12
DDB1-217ENST00000540166 ZDHHC3Q9NYG2 299 aa8.09□□□□□ -1.12
DDB1-217ENST00000540166 APOBEC3BQ9UH17 382 aaKnown RBP8.09□□□□□ -1.12
DDB1-217ENST00000540166 DYRK1BQ9Y463 629 aa8.09□□□□□ -1.12
DDB1-217ENST00000540166 RALGAPA1Q6GYQ0 2036 aa8.08□□□□□ -1.12
DDB1-217ENST00000540166 A0A1W2PPK0 400 aa8.08□□□□□ -1.12
DDB1-217ENST00000540166 A0A1W2PRB8 838 aa8.08□□□□□ -1.12
DDB1-217ENST00000540166 TMEM129A0AVI4 362 aa8.08□□□□□ -1.12
DDB1-217ENST00000540166 F5H0A9 414 aaPredicted RBP8.08□□□□□ -1.12
DDB1-217ENST00000540166 SIGLEC5O15389 551 aa8.08□□□□□ -1.12
DDB1-217ENST00000540166 LRRTM2O43300 516 aa8.08□□□□□ -1.12
DDB1-217ENST00000540166 TNFP01375 233 aa8.08□□□□□ -1.12
DDB1-217ENST00000540166 CD2P06729 351 aa8.08□□□□□ -1.12
DDB1-217ENST00000540166 NPR2P20594 1047 aa8.08□□□□□ -1.12
DDB1-217ENST00000540166 NR0B1P51843 470 aaKnown RBP8.08□□□□□ -1.12
DDB1-217ENST00000540166 AKR1C2P52895 323 aa8.08□□□□□ -1.12
DDB1-217ENST00000540166 AKR1C1Q04828 323 aa8.08□□□□□ -1.12
DDB1-217ENST00000540166 EIF4EBP2Q13542 120 aaPredicted RBP8.08□□□□□ -1.12
DDB1-217ENST00000540166 HLXQ14774 488 aaPredicted RBP8.08□□□□□ -1.12
DDB1-217ENST00000540166 OCLNQ16625 522 aa8.08□□□□□ -1.12
DDB1-217ENST00000540166 AMZ1Q400G9 498 aa8.08□□□□□ -1.12
DDB1-217ENST00000540166 KLHL26Q53HC5 615 aa8.08□□□□□ -1.12
DDB1-217ENST00000540166 OR5M10Q6IEU7 315 aa8.08□□□□□ -1.12
DDB1-217ENST00000540166 C11orf96Q7Z7L8 435 aa8.08□□□□□ -1.12
DDB1-217ENST00000540166 OR52N2Q8NGI0 321 aa8.08□□□□□ -1.12
DDB1-217ENST00000540166 XAGE5Q8WWM1 108 aa8.08□□□□□ -1.12
DDB1-217ENST00000540166 FCAMRQ8WWV6 532 aa8.08□□□□□ -1.12
DDB1-217ENST00000540166 ZNF582Q96NG8 517 aaPredicted RBP8.08□□□□□ -1.12
DDB1-217ENST00000540166 NLGN3Q9NZ94 848 aa8.08□□□□□ -1.12
DDB1-217ENST00000540166 FLVCR2Q9UPI3 526 aa8.08□□□□□ -1.12
DDB1-217ENST00000540166 H0Y8X5 98 aa8.08□□□□□ -1.12
DDB1-217ENST00000540166 SCAMP2O15127 329 aaKnown RBP8.08□□□□□ -1.12
DDB1-217ENST00000540166 TNFSF14O43557 240 aa8.08□□□□□ -1.12
DDB1-217ENST00000540166 GATCO43716 136 aaKnown RBP8.08□□□□□ -1.12
DDB1-217ENST00000540166 SC5DO75845 299 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms