RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 SLC27A6Q9Y2P4 619 aa11.71□□□□□ -0.54
DDX55-206ENST00000539934 PRSS21Q9Y6M0 314 aa11.71□□□□□ -0.54
DDX55-206ENST00000539934 TCRBV21S2A2A0A5A6 115 aa11.7□□□□□ -0.54
DDX55-206ENST00000539934 ANTXRLA6NF34 631 aa11.7□□□□□ -0.54
DDX55-206ENST00000539934 SDHDO14521 159 aa11.7□□□□□ -0.54
DDX55-206ENST00000539934 UBFD1O14562 309 aaKnown RBP11.7□□□□□ -0.54
DDX55-206ENST00000539934 MTX2O75431 263 aa11.7□□□□□ -0.54
DDX55-206ENST00000539934 C6orf47O95873 294 aa11.7□□□□□ -0.54
DDX55-206ENST00000539934 IGHV2-5P01817 119 aa11.7□□□□□ -0.54
DDX55-206ENST00000539934 GDNFP39905 211 aa11.7□□□□□ -0.54
DDX55-206ENST00000539934 NSG1P42857 185 aa11.7□□□□□ -0.54
DDX55-206ENST00000539934 SPINT3P49223 89 aa11.7□□□□□ -0.54
DDX55-206ENST00000539934 RGS4P49798 205 aa11.7□□□□□ -0.54
DDX55-206ENST00000539934 UBE2G2P60604 165 aa11.7□□□□□ -0.54
DDX55-206ENST00000539934 TRAF3Q13114 568 aa11.7□□□□□ -0.54
DDX55-206ENST00000539934 SKP2Q13309 424 aa11.7□□□□□ -0.54
DDX55-206ENST00000539934 PROX2Q3B8N5 592 aa11.7□□□□□ -0.54
DDX55-206ENST00000539934 COQ5Q5HYK3 327 aa11.7□□□□□ -0.54
DDX55-206ENST00000539934 EOGTQ5NDL2 527 aa11.7□□□□□ -0.54
DDX55-206ENST00000539934 VWA1Q6PCB0 445 aa11.7□□□□□ -0.54
DDX55-206ENST00000539934 RFLNAQ6ZTI6 216 aa11.7□□□□□ -0.54
DDX55-206ENST00000539934 EIF3MQ7L2H7 374 aaKnown RBP11.7□□□□□ -0.54
DDX55-206ENST00000539934 NAA40Q86UY6 237 aa11.7□□□□□ -0.54
DDX55-206ENST00000539934 WDR5BQ86VZ2 330 aa11.7□□□□□ -0.54
DDX55-206ENST00000539934 DCUN1D3Q8IWE4 304 aa11.7□□□□□ -0.54
DDX55-206ENST00000539934 OR14A16Q8NHC5 309 aa11.7□□□□□ -0.54
DDX55-206ENST00000539934 WDR20Q8TBZ3 569 aa11.7□□□□□ -0.54
DDX55-206ENST00000539934 SENP5Q96HI0 755 aaPredicted RBP11.7□□□□□ -0.54
DDX55-206ENST00000539934 COPS8Q99627 209 aa11.7□□□□□ -0.54
DDX55-206ENST00000539934 DPCDQ9BVM2 203 aaPredicted RBP11.7□□□□□ -0.54
DDX55-206ENST00000539934 C1QTNF6Q9BXI9 259 aa11.7□□□□□ -0.54
DDX55-206ENST00000539934 DEC1Q9P2X7 70 aa11.7□□□□□ -0.54
DDX55-206ENST00000539934 SPACA6W5XKT8 324 aa11.7□□□□□ -0.54
DDX55-206ENST00000539934 PCNX2A6NKB5 2137 aa11.7□□□□□ -0.54
DDX55-206ENST00000539934 AGAP14A8MT82 685 aa11.7□□□□□ -0.54
DDX55-206ENST00000539934 UPK3BL1B0FP48 263 aa11.7□□□□□ -0.54
DDX55-206ENST00000539934 B4DXG7 233 aa11.7□□□□□ -0.54
DDX55-206ENST00000539934 UPK3BL2E5RIL1 263 aa11.7□□□□□ -0.54
DDX55-206ENST00000539934 PPIHO43447 177 aaKnown RBP11.7□□□□□ -0.54
DDX55-206ENST00000539934 SLC28A2O43868 658 aa11.7□□□□□ -0.54
DDX55-206ENST00000539934 RGS9O75916 674 aaPredicted RBP11.7□□□□□ -0.54
DDX55-206ENST00000539934 CTSLP07711 333 aa11.7□□□□□ -0.54
DDX55-206ENST00000539934 ERCC1P07992 297 aaPredicted RBP11.7□□□□□ -0.54
DDX55-206ENST00000539934 VIPR1P32241 457 aa11.7□□□□□ -0.54
DDX55-206ENST00000539934 MC5RP33032 325 aa11.7□□□□□ -0.54
DDX55-206ENST00000539934 SLC6A11P48066 632 aa11.7□□□□□ -0.54
DDX55-206ENST00000539934 RRAS2P62070 204 aaPredicted RBP11.7□□□□□ -0.54
DDX55-206ENST00000539934 IL5RAQ01344 420 aa11.7□□□□□ -0.54
DDX55-206ENST00000539934 FABP9Q0Z7S8 132 aa11.7□□□□□ -0.54
DDX55-206ENST00000539934 LCP2Q13094 533 aa11.7□□□□□ -0.54
DDX55-206ENST00000539934 GAB1Q13480 694 aa11.7□□□□□ -0.54
DDX55-206ENST00000539934 POM121L1PQ3SYA9 428 aa11.7□□□□□ -0.54
DDX55-206ENST00000539934 PLA2G2CQ5R387 149 aa11.7□□□□□ -0.54
DDX55-206ENST00000539934 CHMP1BQ7LBR1 199 aa11.7□□□□□ -0.54
DDX55-206ENST00000539934 CYP4Z1Q86W10 505 aa11.7□□□□□ -0.54
DDX55-206ENST00000539934 PLD3Q8IV08 490 aa11.7□□□□□ -0.54
DDX55-206ENST00000539934 ETFBKMTQ8IXQ9 262 aa11.7□□□□□ -0.54
DDX55-206ENST00000539934 FAM156AQ8NDB6 213 aa11.7□□□□□ -0.54
DDX55-206ENST00000539934 UBASH3BQ8TF42 649 aa11.7□□□□□ -0.54
DDX55-206ENST00000539934 ULK4Q96C45 1275 aa11.7□□□□□ -0.54
DDX55-206ENST00000539934 NSUN5Q96P11 429 aaKnown RBP11.7□□□□□ -0.54
DDX55-206ENST00000539934 SDHCQ99643 169 aaPredicted RBP11.7□□□□□ -0.54
DDX55-206ENST00000539934 ZDHHC5Q9C0B5 715 aa11.7□□□□□ -0.54
DDX55-206ENST00000539934 LHX6Q9UPM6 363 aa11.7□□□□□ -0.54
DDX55-206ENST00000539934 ZNF281Q9Y2X9 895 aa11.7□□□□□ -0.54
DDX55-206ENST00000539934 CLCA3PQ9Y6N3 262 aa11.7□□□□□ -0.54
DDX55-206ENST00000539934 NPIPA7E9PJI5 369 aa11.69□□□□□ -0.54
DDX55-206ENST00000539934 PRODHO43272 600 aa11.69□□□□□ -0.54
DDX55-206ENST00000539934 KALRNO60229 2985 aa11.69□□□□□ -0.54
DDX55-206ENST00000539934 RHBDL1O75783 438 aa11.69□□□□□ -0.54
DDX55-206ENST00000539934 MELTFP08582 738 aa11.69□□□□□ -0.54
DDX55-206ENST00000539934 NBEAP1P0C6P0 100 aa11.69□□□□□ -0.54
DDX55-206ENST00000539934 NPIPA8P0DM63 369 aa11.69□□□□□ -0.54
DDX55-206ENST00000539934 DGKAP23743 735 aa11.69□□□□□ -0.54
DDX55-206ENST00000539934 PTPN6P29350 595 aa11.69□□□□□ -0.54
DDX55-206ENST00000539934 FGF8P55075 233 aaPredicted RBP11.69□□□□□ -0.54
DDX55-206ENST00000539934 GP2P55259 537 aaKnown RBP11.69□□□□□ -0.54
DDX55-206ENST00000539934 SH3BP2P78314 561 aa11.69□□□□□ -0.54
DDX55-206ENST00000539934 BOP1Q14137 746 aaKnown RBP11.69□□□□□ -0.54
DDX55-206ENST00000539934 NDUFAF6Q330K2 333 aa11.69□□□□□ -0.54
DDX55-206ENST00000539934 MTX3Q5HYI7 312 aa11.69□□□□□ -0.54
DDX55-206ENST00000539934 SPANXN2Q5MJ10 180 aa11.69□□□□□ -0.54
DDX55-206ENST00000539934 RNLSQ5VYX0 342 aa11.69□□□□□ -0.54
DDX55-206ENST00000539934 TMEM198Q66K66 360 aa11.69□□□□□ -0.54
DDX55-206ENST00000539934 P2RY8Q86VZ1 359 aa11.69□□□□□ -0.54
DDX55-206ENST00000539934 ZNF679Q8IYX0 411 aa11.69□□□□□ -0.54
DDX55-206ENST00000539934 FAM89BQ8N5H3 189 aa11.69□□□□□ -0.54
DDX55-206ENST00000539934 ZBTB2Q8N680 514 aa11.69□□□□□ -0.54
DDX55-206ENST00000539934 OR2T4Q8NH00 348 aa11.69□□□□□ -0.54
DDX55-206ENST00000539934 RAB3CQ96E17 227 aa11.69□□□□□ -0.54
DDX55-206ENST00000539934 YIPF6Q96EC8 236 aa11.69□□□□□ -0.54
DDX55-206ENST00000539934 MRPS24Q96EL2 167 aaKnown RBP11.69□□□□□ -0.54
DDX55-206ENST00000539934 MARK4Q96L34 752 aa11.69□□□□□ -0.54
DDX55-206ENST00000539934 TMEM121BQ9BXQ6 578 aaPredicted RBP11.69□□□□□ -0.54
DDX55-206ENST00000539934 MEAF6Q9HAF1 191 aa11.69□□□□□ -0.54
DDX55-206ENST00000539934 SEMA4BQ9NPR2 832 aaPredicted RBP11.69□□□□□ -0.54
DDX55-206ENST00000539934 RYDENQ9NUL5 291 aaKnown RBP11.69□□□□□ -0.54
DDX55-206ENST00000539934 ACACAQ13085 2346 aa11.69□□□□□ -0.54
DDX55-206ENST00000539934 A0A0A6YYH2 397 aa11.68□□□□□ -0.54
DDX55-206ENST00000539934 RNF103-CHMP3A0A140T963 221 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms