RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 AENQ8WTP8 325 aaKnown RBP13.57□□□□□ -0.24
UBE3B-211ENST00000539843 APH1AQ96BI3 265 aa13.57□□□□□ -0.24
UBE3B-211ENST00000539843 TESCQ96BS2 214 aa13.57□□□□□ -0.24
UBE3B-211ENST00000539843 PKNOX2Q96KN3 472 aa13.57□□□□□ -0.24
UBE3B-211ENST00000539843 HS6ST2Q96MM7 605 aa13.57□□□□□ -0.24
UBE3B-211ENST00000539843 TMEM109Q9BVC6 243 aa13.57□□□□□ -0.24
UBE3B-211ENST00000539843 QRSL1Q9H0R6 528 aaKnown RBP13.57□□□□□ -0.24
UBE3B-211ENST00000539843 AKTIPQ9H8T0 292 aa13.57□□□□□ -0.24
UBE3B-211ENST00000539843 SSU72Q9NP77 194 aaKnown RBP13.57□□□□□ -0.24
UBE3B-211ENST00000539843 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.57□□□□□ -0.24
UBE3B-211ENST00000539843 MARCOQ9UEW3 520 aaPredicted RBP13.57□□□□□ -0.24
UBE3B-211ENST00000539843 CHRNA9Q9UGM1 479 aa13.57□□□□□ -0.24
UBE3B-211ENST00000539843 HDGFL3Q9Y3E1 203 aa13.57□□□□□ -0.24
UBE3B-211ENST00000539843 NIPBLQ6KC79 2804 aaeCLIP13.56□□□□□ -0.24
UBE3B-211ENST00000539843 PCNX3Q9H6A9 2034 aa13.56□□□□□ -0.24
UBE3B-211ENST00000539843 CIB4A0PJX0 185 aa13.56□□□□□ -0.24
UBE3B-211ENST00000539843 SMAD9O15198 467 aaKnown RBP13.56□□□□□ -0.24
UBE3B-211ENST00000539843 FCMRO60667 390 aa13.56□□□□□ -0.24
UBE3B-211ENST00000539843 H6PDO95479 791 aa13.56□□□□□ -0.24
UBE3B-211ENST00000539843 LBPP18428 481 aa13.56□□□□□ -0.24
UBE3B-211ENST00000539843 ARRB2P32121 409 aa13.56□□□□□ -0.24
UBE3B-211ENST00000539843 S100A3P33764 101 aa13.56□□□□□ -0.24
UBE3B-211ENST00000539843 ETV4P43268 484 aa13.56□□□□□ -0.24
UBE3B-211ENST00000539843 CLK1P49759 484 aaKnown RBP13.56□□□□□ -0.24
UBE3B-211ENST00000539843 PDK3Q15120 406 aa13.56□□□□□ -0.24
UBE3B-211ENST00000539843 HEPHL1Q6MZM0 1159 aa13.56□□□□□ -0.24
UBE3B-211ENST00000539843 WDR93Q6P2C0 686 aa13.56□□□□□ -0.24
UBE3B-211ENST00000539843 KLHL17Q6TDP4 642 aa13.56□□□□□ -0.24
UBE3B-211ENST00000539843 MTDHQ86UE4 582 aaKnown RBP13.56□□□□□ -0.24
UBE3B-211ENST00000539843 ANKRD46Q86W74 232 aa13.56□□□□□ -0.24
UBE3B-211ENST00000539843 DEPDC4Q8N2C3 294 aa13.56□□□□□ -0.24
UBE3B-211ENST00000539843 IGFBPL1Q8WX77 278 aa13.56□□□□□ -0.24
UBE3B-211ENST00000539843 ROPN1LQ96C74 230 aa13.56□□□□□ -0.24
UBE3B-211ENST00000539843 ZBTB18Q99592 522 aa13.56□□□□□ -0.24
UBE3B-211ENST00000539843 CENPHQ9H3R5 247 aa13.56□□□□□ -0.24
UBE3B-211ENST00000539843 CACYBPQ9HB71 228 aaKnown RBP13.56□□□□□ -0.24
UBE3B-211ENST00000539843 MGAT4BQ9UQ53 548 aa13.56□□□□□ -0.24
UBE3B-211ENST00000539843 NOSIPQ9Y314 301 aaKnown RBP13.56□□□□□ -0.24
UBE3B-211ENST00000539843 HIVEP2P31629 2446 aa13.56□□□□□ -0.24
UBE3B-211ENST00000539843 CCT8L1PA6NM43 557 aa13.55□□□□□ -0.24
UBE3B-211ENST00000539843 ZNF814B7Z6K7 855 aa13.55□□□□□ -0.24
UBE3B-211ENST00000539843 E9PBE3 544 aa13.55□□□□□ -0.24
UBE3B-211ENST00000539843 RYKP34925 604 aa13.55□□□□□ -0.24
UBE3B-211ENST00000539843 MAGEA8P43361 318 aa13.55□□□□□ -0.24
UBE3B-211ENST00000539843 SLC1A6P48664 564 aa13.55□□□□□ -0.24
UBE3B-211ENST00000539843 CDH11P55287 796 aa13.55□□□□□ -0.24
UBE3B-211ENST00000539843 NRF1Q16656 503 aa13.55□□□□□ -0.24
UBE3B-211ENST00000539843 TMEM108Q6UXF1 575 aa13.55□□□□□ -0.24
UBE3B-211ENST00000539843 CMIPQ8IY22 773 aa13.55□□□□□ -0.24
UBE3B-211ENST00000539843 CLEC4FQ8N1N0 589 aa13.55□□□□□ -0.24
UBE3B-211ENST00000539843 DDIT4LQ96D03 193 aa13.55□□□□□ -0.24
UBE3B-211ENST00000539843 NEURL3Q96EH8 262 aa13.55□□□□□ -0.24
UBE3B-211ENST00000539843 ZNF300Q96RE9 604 aaPredicted RBP13.55□□□□□ -0.24
UBE3B-211ENST00000539843 SLC35A5Q9BS91 424 aa13.55□□□□□ -0.24
UBE3B-211ENST00000539843 SERHL2Q9H4I8 314 aa13.55□□□□□ -0.24
UBE3B-211ENST00000539843 EXOSC3Q9NQT5 275 aaKnown RBP13.55□□□□□ -0.24
UBE3B-211ENST00000539843 CISD1Q9NZ45 108 aaKnown RBP13.55□□□□□ -0.24
UBE3B-211ENST00000539843 PRSS50Q9UI38 385 aa13.55□□□□□ -0.24
UBE3B-211ENST00000539843 POU2F3Q9UKI9 436 aa13.55□□□□□ -0.24
UBE3B-211ENST00000539843 LIPT1Q9Y234 373 aa13.55□□□□□ -0.24
UBE3B-211ENST00000539843 ESPNB1AK53 854 aa13.54□□□□□ -0.24
UBE3B-211ENST00000539843 C9JVG2 144 aa13.54□□□□□ -0.24
UBE3B-211ENST00000539843 INAFM1C9JVW0 142 aa13.54□□□□□ -0.24
UBE3B-211ENST00000539843 EIF1BO60739 113 aaKnown RBP13.54□□□□□ -0.24
UBE3B-211ENST00000539843 DNAJA2O60884 412 aa13.54□□□□□ -0.24
UBE3B-211ENST00000539843 MRPL33O75394 65 aaKnown RBP13.54□□□□□ -0.24
UBE3B-211ENST00000539843 PMS2P2O95744 297 aa13.54□□□□□ -0.24
UBE3B-211ENST00000539843 CREB1P16220 341 aa13.54□□□□□ -0.24
UBE3B-211ENST00000539843 COX5AP20674 150 aa13.54□□□□□ -0.24
UBE3B-211ENST00000539843 PGM1P36871 562 aa13.54□□□□□ -0.24
UBE3B-211ENST00000539843 KCNJ10P78508 379 aa13.54□□□□□ -0.24
UBE3B-211ENST00000539843 DMTNQ08495 405 aa13.54□□□□□ -0.24
UBE3B-211ENST00000539843 FAPQ12884 760 aa13.54□□□□□ -0.24
UBE3B-211ENST00000539843 STX3Q13277 289 aa13.54□□□□□ -0.24
UBE3B-211ENST00000539843 AGAP6Q5VW22 663 aa13.54□□□□□ -0.24
UBE3B-211ENST00000539843 FBXW9Q5XUX1 488 aa13.54□□□□□ -0.24
UBE3B-211ENST00000539843 SAXO2Q658L1 398 aa13.54□□□□□ -0.24
UBE3B-211ENST00000539843 ABLIM2Q6H8Q1 611 aa13.54□□□□□ -0.24
UBE3B-211ENST00000539843 OR7E24Q6IFN5 339 aa13.54□□□□□ -0.24
UBE3B-211ENST00000539843 TYW3Q6IPR3 259 aaKnown RBP13.54□□□□□ -0.24
UBE3B-211ENST00000539843 DNAJC14Q6Y2X3 702 aaPredicted RBP13.54□□□□□ -0.24
UBE3B-211ENST00000539843 KBTBD8Q8NFY9 601 aa13.54□□□□□ -0.24
UBE3B-211ENST00000539843 PMM1Q92871 262 aa13.54□□□□□ -0.24
UBE3B-211ENST00000539843 RAB8BQ92930 207 aa13.54□□□□□ -0.24
UBE3B-211ENST00000539843 ZNF775Q96BV0 537 aaPredicted RBP13.54□□□□□ -0.24
UBE3B-211ENST00000539843 ADAD1Q96M93 576 aaKnown RBP13.54□□□□□ -0.24
UBE3B-211ENST00000539843 PANX1Q96RD7 426 aa13.54□□□□□ -0.24
UBE3B-211ENST00000539843 NAA11Q9BSU3 229 aaPredicted RBP13.54□□□□□ -0.24
UBE3B-211ENST00000539843 NUF2Q9BZD4 464 aa13.54□□□□□ -0.24
UBE3B-211ENST00000539843 KCNK9Q9NPC2 374 aa13.54□□□□□ -0.24
UBE3B-211ENST00000539843 CTPS2Q9NRF8 586 aa13.54□□□□□ -0.24
UBE3B-211ENST00000539843 PARPBPQ9NWS1 579 aa13.54□□□□□ -0.24
UBE3B-211ENST00000539843 ASB6Q9NWX5 421 aa13.54□□□□□ -0.24
UBE3B-211ENST00000539843 MAGED1Q9Y5V3 778 aaPredicted RBP13.54□□□□□ -0.24
UBE3B-211ENST00000539843 RAI1Q7Z5J4 1906 aaPredicted RBP13.54□□□□□ -0.24
UBE3B-211ENST00000539843 IGKV3D-15A0A087WSY6 115 aa13.53□□□□□ -0.24
UBE3B-211ENST00000539843 OR5H1A6NKK0 313 aa13.53□□□□□ -0.24
UBE3B-211ENST00000539843 ABCD4O14678 606 aa13.53□□□□□ -0.24
UBE3B-211ENST00000539843 ITM2AO43736 263 aa13.53□□□□□ -0.24
UBE3B-211ENST00000539843 RAD51DO75771 328 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms