RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 RAD51Q06609 339 aa3.39□□□□□ -1.87
AC055720.1-201ENST00000539552 KLC1Q07866 573 aa3.39□□□□□ -1.87
AC055720.1-201ENST00000539552 GPS2Q13227 327 aa3.39□□□□□ -1.87
AC055720.1-201ENST00000539552 STX3Q13277 289 aa3.39□□□□□ -1.87
AC055720.1-201ENST00000539552 SNTA1Q13424 505 aa3.39□□□□□ -1.87
AC055720.1-201ENST00000539552 ART3Q13508 389 aa3.39□□□□□ -1.87
AC055720.1-201ENST00000539552 CASP8Q14790 479 aa3.39□□□□□ -1.87
AC055720.1-201ENST00000539552 MEF2DQ14814 521 aa3.39□□□□□ -1.87
AC055720.1-201ENST00000539552 ZNF169Q14929 603 aaPredicted RBP3.39□□□□□ -1.87
AC055720.1-201ENST00000539552 FASTKD3Q14CZ7 662 aaKnown RBP3.39□□□□□ -1.87
AC055720.1-201ENST00000539552 EFNB3Q15768 340 aa3.39□□□□□ -1.87
AC055720.1-201ENST00000539552 PHKG1Q16816 387 aa3.39□□□□□ -1.87
AC055720.1-201ENST00000539552 KNOP1Q1ED39 458 aaKnown RBP3.39□□□□□ -1.87
AC055720.1-201ENST00000539552 LRRC26Q2I0M4 334 aa3.39□□□□□ -1.87
AC055720.1-201ENST00000539552 GPR33Q49SQ1 333 aa3.39□□□□□ -1.87
AC055720.1-201ENST00000539552 ZNF542PQ5EBM4 170 aa3.39□□□□□ -1.87
AC055720.1-201ENST00000539552 CDKL4Q5MAI5 379 aa3.39□□□□□ -1.87
AC055720.1-201ENST00000539552 SLX4IPQ5VYV7 408 aa3.39□□□□□ -1.87
AC055720.1-201ENST00000539552 MFSD14CQ5VZR4 134 aa3.39□□□□□ -1.87
AC055720.1-201ENST00000539552 ZNF776Q68DI1 518 aaPredicted RBP3.39□□□□□ -1.87
AC055720.1-201ENST00000539552 OR4A47Q6IF82 309 aa3.39□□□□□ -1.87
AC055720.1-201ENST00000539552 ZNF425Q6IV72 752 aa3.39□□□□□ -1.87
AC055720.1-201ENST00000539552 PPP1R2P3Q6NXS1 205 aa3.39□□□□□ -1.87
AC055720.1-201ENST00000539552 ULK3Q6PHR2 472 aa3.39□□□□□ -1.87
AC055720.1-201ENST00000539552 SASS6Q6UVJ0 657 aa3.39□□□□□ -1.87
AC055720.1-201ENST00000539552 Q75L30 129 aa3.39□□□□□ -1.87
AC055720.1-201ENST00000539552 ZNF367Q7RTV3 350 aa3.39□□□□□ -1.87
AC055720.1-201ENST00000539552 MRPL21Q7Z2W9 205 aaKnown RBP3.39□□□□□ -1.87
AC055720.1-201ENST00000539552 AMIGO2Q86SJ2 522 aa3.39□□□□□ -1.87
AC055720.1-201ENST00000539552 GPBP1Q86WP2 473 aa3.39□□□□□ -1.87
AC055720.1-201ENST00000539552 GPSM1Q86YR5 675 aa3.39□□□□□ -1.87
AC055720.1-201ENST00000539552 SNX31Q8N9S9 440 aa3.39□□□□□ -1.87
AC055720.1-201ENST00000539552 STXBP6Q8NFX7 210 aa3.39□□□□□ -1.87
AC055720.1-201ENST00000539552 OR13C3Q8NGS6 347 aa3.39□□□□□ -1.87
AC055720.1-201ENST00000539552 OR1F12Q8NHA8 337 aa3.39□□□□□ -1.87
AC055720.1-201ENST00000539552 THAP6Q8TBB0 222 aa3.39□□□□□ -1.87
AC055720.1-201ENST00000539552 HCAR2Q8TDS4 363 aa3.39□□□□□ -1.87
AC055720.1-201ENST00000539552 FCAMRQ8WWV6 532 aa3.39□□□□□ -1.87
AC055720.1-201ENST00000539552 MYLPFQ96A32 169 aa3.39□□□□□ -1.87
AC055720.1-201ENST00000539552 PHF21AQ96BD5 680 aa3.39□□□□□ -1.87
AC055720.1-201ENST00000539552 ECHDC3Q96DC8 303 aa3.39□□□□□ -1.87
AC055720.1-201ENST00000539552 MTBPQ96DY7 904 aa3.39□□□□□ -1.87
AC055720.1-201ENST00000539552 PDLIM2Q96JY6 352 aa3.39□□□□□ -1.87
AC055720.1-201ENST00000539552 RITA1Q96K30 269 aa3.39□□□□□ -1.87
AC055720.1-201ENST00000539552 TSSK3Q96PN8 268 aa3.39□□□□□ -1.87
AC055720.1-201ENST00000539552 IL4I1Q96RQ9 567 aa3.39□□□□□ -1.87
AC055720.1-201ENST00000539552 MAP3K3Q99759 626 aa3.39□□□□□ -1.87
AC055720.1-201ENST00000539552 P2RY13Q9BPV8 354 aa3.39□□□□□ -1.87
AC055720.1-201ENST00000539552 TUBGCP2Q9BSJ2 902 aa3.39□□□□□ -1.87
AC055720.1-201ENST00000539552 MED10Q9BTT4 135 aa3.39□□□□□ -1.87
AC055720.1-201ENST00000539552 VN1R1Q9GZP7 353 aa3.39□□□□□ -1.87
AC055720.1-201ENST00000539552 HIPK2Q9H2X6 1198 aa3.39□□□□□ -1.87
AC055720.1-201ENST00000539552 CNGB3Q9NQW8 809 aa3.39□□□□□ -1.87
AC055720.1-201ENST00000539552 POLE4Q9NR33 117 aa3.39□□□□□ -1.87
AC055720.1-201ENST00000539552 MIOSQ9NXC5 875 aa3.39□□□□□ -1.87
AC055720.1-201ENST00000539552 SLC12A6Q9UHW9 1150 aa3.39□□□□□ -1.87
AC055720.1-201ENST00000539552 POLDIP2Q9Y2S7 368 aa3.39□□□□□ -1.87
AC055720.1-201ENST00000539552 ZNF175Q9Y473 711 aa3.39□□□□□ -1.87
AC055720.1-201ENST00000539552 ETV7Q9Y603 341 aa3.39□□□□□ -1.87
AC055720.1-201ENST00000539552 FANCMQ8IYD8 2048 aa3.39□□□□□ -1.87
AC055720.1-201ENST00000539552 BIRC6Q9NR09 4857 aa3.38□□□□□ -1.87
AC055720.1-201ENST00000539552 ANKHD1Q8IWZ3 2542 aaKnown RBP3.38□□□□□ -1.87
AC055720.1-201ENST00000539552 MYOM3Q5VTT5 1437 aa3.38□□□□□ -1.87
AC055720.1-201ENST00000539552 CUBNO60494 3623 aa3.38□□□□□ -1.87
AC055720.1-201ENST00000539552 KBTBD11-OT1A0A1B0GTJ5 212 aa3.38□□□□□ -1.87
AC055720.1-201ENST00000539552 SH3PXD2BA1X283 911 aa3.38□□□□□ -1.87
AC055720.1-201ENST00000539552 YJEFN3A6XGL0 299 aa3.38□□□□□ -1.87
AC055720.1-201ENST00000539552 GOLGA8MH3BSY2 632 aa3.38□□□□□ -1.87
AC055720.1-201ENST00000539552 OR7A17O14581 309 aa3.38□□□□□ -1.87
AC055720.1-201ENST00000539552 TOR1AO14656 332 aa3.38□□□□□ -1.87
AC055720.1-201ENST00000539552 RAB29O14966 203 aa3.38□□□□□ -1.87
AC055720.1-201ENST00000539552 LDB2O43679 373 aa3.38□□□□□ -1.87
AC055720.1-201ENST00000539552 OR2J3O76001 311 aa3.38□□□□□ -1.87
AC055720.1-201ENST00000539552 ERLIN2O94905 339 aa3.38□□□□□ -1.87
AC055720.1-201ENST00000539552 PAPSS2O95340 614 aaPredicted RBP3.38□□□□□ -1.87
AC055720.1-201ENST00000539552 GSTT2P0CG29 244 aa3.38□□□□□ -1.87
AC055720.1-201ENST00000539552 GSTT2BP0CG30 244 aa3.38□□□□□ -1.87
AC055720.1-201ENST00000539552 ARSBP15848 533 aa3.38□□□□□ -1.87
AC055720.1-201ENST00000539552 CAPN2P17655 700 aa3.38□□□□□ -1.87
AC055720.1-201ENST00000539552 GTF2E2P29084 291 aaKnown RBP3.38□□□□□ -1.87
AC055720.1-201ENST00000539552 PPP2R1BP30154 601 aa3.38□□□□□ -1.87
AC055720.1-201ENST00000539552 HNRNPH1P31943 449 aaKnown RBP3.38□□□□□ -1.87
AC055720.1-201ENST00000539552 SFTPDP35247 375 aa3.38□□□□□ -1.87
AC055720.1-201ENST00000539552 PIGAP37287 484 aa3.38□□□□□ -1.87
AC055720.1-201ENST00000539552 RPL3P39023 403 aaKnown RBP3.38□□□□□ -1.87
AC055720.1-201ENST00000539552 MMP12P39900 470 aa3.38□□□□□ -1.87
AC055720.1-201ENST00000539552 MNDAP41218 407 aa3.38□□□□□ -1.87
AC055720.1-201ENST00000539552 SLC1A4P43007 532 aa3.38□□□□□ -1.87
AC055720.1-201ENST00000539552 CDC34P49427 236 aaPredicted RBP3.38□□□□□ -1.87
AC055720.1-201ENST00000539552 EFNB2P52799 333 aa3.38□□□□□ -1.87
AC055720.1-201ENST00000539552 ART1P52961 327 aa3.38□□□□□ -1.87
AC055720.1-201ENST00000539552 HMGCS2P54868 508 aa3.38□□□□□ -1.87
AC055720.1-201ENST00000539552 HNRNPH2P55795 449 aaKnown RBP3.38□□□□□ -1.87
AC055720.1-201ENST00000539552 ATP5J2P56134 94 aa3.38□□□□□ -1.87
AC055720.1-201ENST00000539552 CLDN17P56750 224 aa3.38□□□□□ -1.87
AC055720.1-201ENST00000539552 GPX6P59796 221 aa3.38□□□□□ -1.87
AC055720.1-201ENST00000539552 ARPC4P59998 168 aa3.38□□□□□ -1.87
AC055720.1-201ENST00000539552 UBE2G2P60604 165 aa3.38□□□□□ -1.87
AC055720.1-201ENST00000539552 EEF1A1P68104 462 aaKnown RBP3.38□□□□□ -1.87
AC055720.1-201ENST00000539552 TUBA4AP68366 448 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms