RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 SPTBN1Q01082 2364 aaKnown RBP14.14□□□□□ -0.15
RPAIN-206ENST00000539417 TPST2O60704 377 aa14.13□□□□□ -0.15
RPAIN-206ENST00000539417 GP1BBP13224 206 aa14.13□□□□□ -0.15
RPAIN-206ENST00000539417 ELK4P28324 431 aa14.13□□□□□ -0.15
RPAIN-206ENST00000539417 CHRNB4P30926 498 aa14.13□□□□□ -0.15
RPAIN-206ENST00000539417 PRKAR1BP31321 381 aa14.13□□□□□ -0.15
RPAIN-206ENST00000539417 RBBP4Q09028 425 aa14.13□□□□□ -0.15
RPAIN-206ENST00000539417 PON3Q15166 354 aa14.13□□□□□ -0.15
RPAIN-206ENST00000539417 DUSP7Q16829 419 aa14.13□□□□□ -0.15
RPAIN-206ENST00000539417 DHRS4L2Q6PKH6 230 aa14.13□□□□□ -0.15
RPAIN-206ENST00000539417 MAMDC2Q7Z304 686 aaPredicted RBP14.13□□□□□ -0.15
RPAIN-206ENST00000539417 OR4D11Q8NGI4 311 aa14.13□□□□□ -0.15
RPAIN-206ENST00000539417 OR2V1Q8NHB1 315 aa14.13□□□□□ -0.15
RPAIN-206ENST00000539417 LILRB4Q8NHJ6 448 aa14.13□□□□□ -0.15
RPAIN-206ENST00000539417 TAMM41Q96BW9 452 aa14.13□□□□□ -0.15
RPAIN-206ENST00000539417 INTS12Q96CB8 462 aaKnown RBP14.13□□□□□ -0.15
RPAIN-206ENST00000539417 KLHL15Q96M94 604 aa14.13□□□□□ -0.15
RPAIN-206ENST00000539417 OR11A1Q9GZK7 315 aa14.13□□□□□ -0.15
RPAIN-206ENST00000539417 EFCAB1Q9HAE3 211 aa14.13□□□□□ -0.15
RPAIN-206ENST00000539417 COQ3Q9NZJ6 369 aa14.13□□□□□ -0.15
RPAIN-206ENST00000539417 OSGIN1Q9UJX0 560 aa14.13□□□□□ -0.15
RPAIN-206ENST00000539417 TMEM229AB2RXF0 380 aa14.12□□□□□ -0.15
RPAIN-206ENST00000539417 CLDN14O95500 239 aa14.12□□□□□ -0.15
RPAIN-206ENST00000539417 AGAP20933 346 aa14.12□□□□□ -0.15
RPAIN-206ENST00000539417 HTR2AP28223 471 aa14.12□□□□□ -0.15
RPAIN-206ENST00000539417 TACR3P29371 465 aa14.12□□□□□ -0.15
RPAIN-206ENST00000539417 PRDX6P30041 224 aa14.12□□□□□ -0.15
RPAIN-206ENST00000539417 SLC7A2P52569 658 aa14.12□□□□□ -0.15
RPAIN-206ENST00000539417 GABPB1Q06547 395 aaPredicted RBP14.12□□□□□ -0.15
RPAIN-206ENST00000539417 SELENBP1Q13228 472 aa14.12□□□□□ -0.15
RPAIN-206ENST00000539417 HBMQ6B0K9 141 aa14.12□□□□□ -0.15
RPAIN-206ENST00000539417 GRINAQ7Z429 371 aa14.12□□□□□ -0.15
RPAIN-206ENST00000539417 ARMC8Q8IUR7 673 aa14.12□□□□□ -0.15
RPAIN-206ENST00000539417 CADM2Q8N3J6 435 aa14.12□□□□□ -0.15
RPAIN-206ENST00000539417 ANKS4BQ8N8V4 417 aa14.12□□□□□ -0.15
RPAIN-206ENST00000539417 CA5BP1Q8WTZ4 195 aa14.12□□□□□ -0.15
RPAIN-206ENST00000539417 TMEM234Q8WY98 164 aa14.12□□□□□ -0.15
RPAIN-206ENST00000539417 OSTF1Q92882 214 aa14.12□□□□□ -0.15
RPAIN-206ENST00000539417 WNT2BQ93097 391 aa14.12□□□□□ -0.15
RPAIN-206ENST00000539417 CMTM5Q96DZ9 223 aa14.12□□□□□ -0.15
RPAIN-206ENST00000539417 REXO5Q96IC2 774 aaKnown RBP14.12□□□□□ -0.15
RPAIN-206ENST00000539417 LRRC37BQ96QE4 947 aa14.12□□□□□ -0.15
RPAIN-206ENST00000539417 PACSIN3Q9UKS6 424 aa14.12□□□□□ -0.15
RPAIN-206ENST00000539417 SETXQ7Z333 2677 aaKnown RBP14.12□□□□□ -0.15
RPAIN-206ENST00000539417 TMED7-TICAM2A0A0A6YYA0 188 aa14.12□□□□□ -0.15
RPAIN-206ENST00000539417 TMEM72A0PK05 275 aa14.12□□□□□ -0.15
RPAIN-206ENST00000539417 ZC3H12DA2A288 527 aaKnown RBP14.12□□□□□ -0.15
RPAIN-206ENST00000539417 SLC22A20A6NK97 555 aa14.12□□□□□ -0.15
RPAIN-206ENST00000539417 PRSS44E7EML9 344 aa14.12□□□□□ -0.15
RPAIN-206ENST00000539417 M0R3H8 397 aa14.12□□□□□ -0.15
RPAIN-206ENST00000539417 FAAHO00519 579 aa14.12□□□□□ -0.15
RPAIN-206ENST00000539417 RCBTB2O95199 551 aa14.12□□□□□ -0.15
RPAIN-206ENST00000539417 IL2RAP01589 272 aa14.12□□□□□ -0.15
RPAIN-206ENST00000539417 TMIGD3P0DMS9 266 aaPredicted RBP14.12□□□□□ -0.15
RPAIN-206ENST00000539417 CD247P20963 164 aa14.12□□□□□ -0.15
RPAIN-206ENST00000539417 HTR1EP28566 365 aa14.12□□□□□ -0.15
RPAIN-206ENST00000539417 LIPEQ05469 1076 aa14.12□□□□□ -0.15
RPAIN-206ENST00000539417 TFF3Q07654 80 aa14.12□□□□□ -0.15
RPAIN-206ENST00000539417 ART3Q13508 389 aa14.12□□□□□ -0.15
RPAIN-206ENST00000539417 SGCBQ16585 318 aa14.12□□□□□ -0.15
RPAIN-206ENST00000539417 PPP4R4Q6NUP7 873 aa14.12□□□□□ -0.15
RPAIN-206ENST00000539417 HACD2Q6Y1H2 254 aa14.12□□□□□ -0.15
RPAIN-206ENST00000539417 ESPNLQ6ZVH7 1005 aa14.12□□□□□ -0.15
RPAIN-206ENST00000539417 CHMP1BQ7LBR1 199 aa14.12□□□□□ -0.15
RPAIN-206ENST00000539417 KRT73Q86Y46 540 aa14.12□□□□□ -0.15
RPAIN-206ENST00000539417 RBM45Q8IUH3 476 aaKnown RBP14.12□□□□□ -0.15
RPAIN-206ENST00000539417 ROBO4Q8WZ75 1007 aa14.12□□□□□ -0.15
RPAIN-206ENST00000539417 ARL5BQ96KC2 179 aa14.12□□□□□ -0.15
RPAIN-206ENST00000539417 ZNF607Q96SK3 696 aa14.12□□□□□ -0.15
RPAIN-206ENST00000539417 SH3GL1Q99961 368 aa14.12□□□□□ -0.15
RPAIN-206ENST00000539417 ADAM19Q9H013 955 aa14.12□□□□□ -0.15
RPAIN-206ENST00000539417 CLEC4AQ9UMR7 237 aa14.12□□□□□ -0.15
RPAIN-206ENST00000539417 TMED7Q9Y3B3 224 aa14.12□□□□□ -0.15
RPAIN-206ENST00000539417 CACNA1CQ13936 2221 aa14.11□□□□□ -0.15
RPAIN-206ENST00000539417 CELSR2Q9HCU4 2923 aa14.11□□□□□ -0.15
RPAIN-206ENST00000539417 IGHV3-15A0A0B4J1V0 119 aa14.11□□□□□ -0.15
RPAIN-206ENST00000539417 FAM220BPB1ANY3 271 aa14.11□□□□□ -0.15
RPAIN-206ENST00000539417 BMP5P22003 454 aa14.11□□□□□ -0.15
RPAIN-206ENST00000539417 ME2P23368 584 aa14.11□□□□□ -0.15
RPAIN-206ENST00000539417 APOBEC1P41238 236 aaKnown RBP14.11□□□□□ -0.15
RPAIN-206ENST00000539417 SLC1A3P43003 542 aa14.11□□□□□ -0.15
RPAIN-206ENST00000539417 EEFSECP57772 596 aaKnown RBP14.11□□□□□ -0.15
RPAIN-206ENST00000539417 PSME3P61289 254 aa14.11□□□□□ -0.15
RPAIN-206ENST00000539417 BNIP2Q12982 314 aa14.11□□□□□ -0.15
RPAIN-206ENST00000539417 NPTX1Q15818 432 aa14.11□□□□□ -0.15
RPAIN-206ENST00000539417 GKAP1Q5VSY0 366 aaPredicted RBP14.11□□□□□ -0.15
RPAIN-206ENST00000539417 FAM91A1Q658Y4 838 aa14.11□□□□□ -0.15
RPAIN-206ENST00000539417 C3orf33Q6P1S2 294 aa14.11□□□□□ -0.15
RPAIN-206ENST00000539417 CCDC80Q76M96 950 aa14.11□□□□□ -0.15
RPAIN-206ENST00000539417 ZNF550Q7Z398 422 aa14.11□□□□□ -0.15
RPAIN-206ENST00000539417 P4HA3Q7Z4N8 544 aa14.11□□□□□ -0.15
RPAIN-206ENST00000539417 TSPYL5Q86VY4 417 aaPredicted RBP14.11□□□□□ -0.15
RPAIN-206ENST00000539417 ZNF440Q8IYI8 595 aa14.11□□□□□ -0.15
RPAIN-206ENST00000539417 MICU2Q8IYU8 434 aa14.11□□□□□ -0.15
RPAIN-206ENST00000539417 CCDC197Q8NCU1 140 aa14.11□□□□□ -0.15
RPAIN-206ENST00000539417 ASB5Q8WWX0 329 aa14.11□□□□□ -0.15
RPAIN-206ENST00000539417 C3orf49Q96BT1 292 aa14.11□□□□□ -0.15
RPAIN-206ENST00000539417 OR5B2Q96R09 309 aa14.11□□□□□ -0.15
RPAIN-206ENST00000539417 SPATA5L1Q9BVQ7 753 aa14.11□□□□□ -0.15
RPAIN-206ENST00000539417 RNF122Q9H9V4 155 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms