RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 OR51G1Q8NGK1 321 aa2.36□□□□□ -2.03
CCDC7-209ENST00000539197 CELF6Q96J87 481 aaKnown RBP2.36□□□□□ -2.03
CCDC7-209ENST00000539197 CITED1Q99966 193 aa2.36□□□□□ -2.03
CCDC7-209ENST00000539197 AIG1Q9NVV5 245 aa2.36□□□□□ -2.03
CCDC7-209ENST00000539197 TREM2Q9NZC2 230 aa2.36□□□□□ -2.03
CCDC7-209ENST00000539197 ANAPC7Q9UJX3 599 aa2.36□□□□□ -2.03
CCDC7-209ENST00000539197 MGAT4BQ9UQ53 548 aa2.36□□□□□ -2.03
CCDC7-209ENST00000539197 UGT2A1Q9Y4X1 527 aa2.36□□□□□ -2.03
CCDC7-209ENST00000539197 WIF1Q9Y5W5 379 aa2.36□□□□□ -2.03
CCDC7-209ENST00000539197 ESYT2A0FGR8 921 aa2.35□□□□□ -2.03
CCDC7-209ENST00000539197 CCER2I3L3R5 266 aa2.35□□□□□ -2.03
CCDC7-209ENST00000539197 PES1O00541 588 aaKnown RBP2.35□□□□□ -2.03
CCDC7-209ENST00000539197 STX7O15400 261 aaKnown RBP2.35□□□□□ -2.03
CCDC7-209ENST00000539197 ZNF780AO75290 641 aaPredicted RBP2.35□□□□□ -2.03
CCDC7-209ENST00000539197 SLC25A27O95847 323 aa2.35□□□□□ -2.03
CCDC7-209ENST00000539197 IGKV4-1P06312 121 aa2.35□□□□□ -2.03
CCDC7-209ENST00000539197 ATP6V1E1P36543 226 aa2.35□□□□□ -2.03
CCDC7-209ENST00000539197 BDKRB1P46663 353 aa2.35□□□□□ -2.03
CCDC7-209ENST00000539197 HSF2Q03933 536 aa2.35□□□□□ -2.03
CCDC7-209ENST00000539197 ARL6IP1Q15041 203 aa2.35□□□□□ -2.03
CCDC7-209ENST00000539197 TRIP10Q15642 601 aa2.35□□□□□ -2.03
CCDC7-209ENST00000539197 TMEM52BQ4KMG9 183 aa2.35□□□□□ -2.03
CCDC7-209ENST00000539197 ZNF311Q5JNZ3 666 aa2.35□□□□□ -2.03
CCDC7-209ENST00000539197 RAET1GQ6H3X3 334 aa2.35□□□□□ -2.03
CCDC7-209ENST00000539197 CBWD2Q8IUF1 395 aa2.35□□□□□ -2.03
CCDC7-209ENST00000539197 ELMOD2Q8IZ81 293 aa2.35□□□□□ -2.03
CCDC7-209ENST00000539197 SAMD8Q96LT4 415 aa2.35□□□□□ -2.03
CCDC7-209ENST00000539197 GAL3ST1Q99999 423 aa2.35□□□□□ -2.03
CCDC7-209ENST00000539197 RASL11BQ9BPW5 248 aa2.35□□□□□ -2.03
CCDC7-209ENST00000539197 DHX33Q9H6R0 707 aaKnown RBP2.35□□□□□ -2.03
CCDC7-209ENST00000539197 SOHLH2Q9NX45 425 aa2.35□□□□□ -2.03
CCDC7-209ENST00000539197 AIPL1Q9NZN9 384 aa2.35□□□□□ -2.03
CCDC7-209ENST00000539197 WRAP73Q9P2S5 460 aaPredicted RBP2.35□□□□□ -2.03
CCDC7-209ENST00000539197 MTRF1LQ9UGC7 380 aaKnown RBP2.35□□□□□ -2.03
CCDC7-209ENST00000539197 WARS2Q9UGM6 360 aaKnown RBP2.35□□□□□ -2.03
CCDC7-209ENST00000539197 MAD1L1Q9Y6D9 718 aa2.35□□□□□ -2.03
CCDC7-209ENST00000539197 CUX2O14529 1486 aa2.34□□□□□ -2.03
CCDC7-209ENST00000539197 E7ESA3 106 aa2.34□□□□□ -2.03
CCDC7-209ENST00000539197 KIF2AO00139 706 aaPredicted RBP2.34□□□□□ -2.03
CCDC7-209ENST00000539197 VPS26AO75436 327 aa2.34□□□□□ -2.03
CCDC7-209ENST00000539197 KIAA0754O94854 1291 aa2.34□□□□□ -2.03
CCDC7-209ENST00000539197 P04436 131 aa2.34□□□□□ -2.03
CCDC7-209ENST00000539197 GIPP09681 153 aaPredicted RBP2.34□□□□□ -2.03
CCDC7-209ENST00000539197 ZNF14P17017 642 aaPredicted RBP2.34□□□□□ -2.03
CCDC7-209ENST00000539197 PSMA2P25787 234 aa2.34□□□□□ -2.03
CCDC7-209ENST00000539197 ANXA13P27216 316 aa2.34□□□□□ -2.03
CCDC7-209ENST00000539197 PTGFRP43088 359 aa2.34□□□□□ -2.03
CCDC7-209ENST00000539197 MNAT1P51948 309 aa2.34□□□□□ -2.03
CCDC7-209ENST00000539197 MTTPP55157 894 aa2.34□□□□□ -2.03
CCDC7-209ENST00000539197 YBEYP58557 167 aaPredicted RBP2.34□□□□□ -2.03
CCDC7-209ENST00000539197 SELENOTP62341 195 aa2.34□□□□□ -2.03
CCDC7-209ENST00000539197 ACTA1P68133 377 aa2.34□□□□□ -2.03
CCDC7-209ENST00000539197 OR52W1Q6IF63 320 aa2.34□□□□□ -2.03
CCDC7-209ENST00000539197 LRRC8BQ6P9F7 803 aa2.34□□□□□ -2.03
CCDC7-209ENST00000539197 FAM199XQ6PEV8 388 aaPredicted RBP2.34□□□□□ -2.03
CCDC7-209ENST00000539197 SLC25A34Q6PIV7 304 aa2.34□□□□□ -2.03
CCDC7-209ENST00000539197 PNPT1Q8TCS8 783 aaKnown RBP2.34□□□□□ -2.03
CCDC7-209ENST00000539197 TCTEX1D2Q8WW35 142 aa2.34□□□□□ -2.03
CCDC7-209ENST00000539197 CCDC47Q96A33 483 aaKnown RBP2.34□□□□□ -2.03
CCDC7-209ENST00000539197 RAB7BQ96AH8 199 aa2.34□□□□□ -2.03
CCDC7-209ENST00000539197 PGLYRP4Q96LB8 373 aa2.34□□□□□ -2.03
CCDC7-209ENST00000539197 SPATA16Q9BXB7 569 aa2.34□□□□□ -2.03
CCDC7-209ENST00000539197 NAT10Q9H0A0 1025 aaKnown RBP2.34□□□□□ -2.03
CCDC7-209ENST00000539197 ANGPTL2Q9UKU9 493 aa2.34□□□□□ -2.03
CCDC7-209ENST00000539197 TP53TG5Q9Y2B4 290 aa2.34□□□□□ -2.03
CCDC7-209ENST00000539197 GNA14O95837 355 aa2.33□□□□□ -2.04
CCDC7-209ENST00000539197 PCCBP05166 539 aa2.33□□□□□ -2.04
CCDC7-209ENST00000539197 PLEKP08567 350 aaPredicted RBP2.33□□□□□ -2.04
CCDC7-209ENST00000539197 STMN1P16949 149 aa2.33□□□□□ -2.04
CCDC7-209ENST00000539197 ARF4P18085 180 aaPredicted RBP2.33□□□□□ -2.04
CCDC7-209ENST00000539197 ADSSP30520 456 aa2.33□□□□□ -2.04
CCDC7-209ENST00000539197 TFPI2P48307 235 aa2.33□□□□□ -2.04
CCDC7-209ENST00000539197 RAB40BQ12829 278 aa2.33□□□□□ -2.04
CCDC7-209ENST00000539197 SPP2Q13103 211 aa2.33□□□□□ -2.04
CCDC7-209ENST00000539197 CUL1Q13616 776 aa2.33□□□□□ -2.04
CCDC7-209ENST00000539197 ATL3Q6DD88 541 aa2.33□□□□□ -2.04
CCDC7-209ENST00000539197 ZSCAN25Q6NSZ9 544 aa2.33□□□□□ -2.04
CCDC7-209ENST00000539197 CCDC137Q6PK04 289 aaKnown RBP2.33□□□□□ -2.04
CCDC7-209ENST00000539197 LINC01561Q8N1V8 128 aa2.33□□□□□ -2.04
CCDC7-209ENST00000539197 PNKDQ8N490 385 aa2.33□□□□□ -2.04
CCDC7-209ENST00000539197 CHCHD10Q8WYQ3 142 aaPredicted RBP2.33□□□□□ -2.04
CCDC7-209ENST00000539197 RAPGEF5Q92565 580 aa2.33□□□□□ -2.04
CCDC7-209ENST00000539197 MYLPFQ96A32 169 aa2.33□□□□□ -2.04
CCDC7-209ENST00000539197 NRIP2Q9BQI9 281 aa2.33□□□□□ -2.04
CCDC7-209ENST00000539197 RIOK1Q9BRS2 568 aaKnown RBP2.33□□□□□ -2.04
CCDC7-209ENST00000539197 PELOQ9BRX2 385 aaKnown RBP2.33□□□□□ -2.04
CCDC7-209ENST00000539197 FICDQ9BVA6 458 aa2.33□□□□□ -2.04
CCDC7-209ENST00000539197 AGPAT5Q9NUQ2 364 aa2.33□□□□□ -2.04
CCDC7-209ENST00000539197 B3GNT2Q9NY97 397 aa2.33□□□□□ -2.04
CCDC7-209ENST00000539197 ATXN10Q9UBB4 475 aa2.33□□□□□ -2.04
CCDC7-209ENST00000539197 CHMP2BQ9UQN3 213 aa2.33□□□□□ -2.04
CCDC7-209ENST00000539197 NEUROG3Q9Y4Z2 214 aa2.33□□□□□ -2.04
CCDC7-209ENST00000539197 ALG6Q9Y672 507 aa2.33□□□□□ -2.04
CCDC7-209ENST00000539197 CARMIL1Q5VZK9 1371 aa2.33□□□□□ -2.04
CCDC7-209ENST00000539197 IGLV2-18A0A075B6J9 118 aa2.32□□□□□ -2.04
CCDC7-209ENST00000539197 IGHV3-64DA0A0J9YX35 117 aa2.32□□□□□ -2.04
CCDC7-209ENST00000539197 GFYI3L273 518 aa2.32□□□□□ -2.04
CCDC7-209ENST00000539197 MT-ND3P03897 115 aa2.32□□□□□ -2.04
CCDC7-209ENST00000539197 PNMA6AP0CW24 399 aaPredicted RBP2.32□□□□□ -2.04
CCDC7-209ENST00000539197 TNNI3P19429 210 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms