RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 ITGA5P08648 1049 aa12.28□□□□□ -0.44
SMARCA4-206ENST00000538456 LINC00032P0C843 101 aa12.28□□□□□ -0.44
SMARCA4-206ENST00000538456 TFPIP10646 304 aa12.28□□□□□ -0.44
SMARCA4-206ENST00000538456 NTF4P34130 210 aa12.28□□□□□ -0.44
SMARCA4-206ENST00000538456 HPCAL1P37235 193 aa12.28□□□□□ -0.44
SMARCA4-206ENST00000538456 NR4A2P43354 598 aa12.28□□□□□ -0.44
SMARCA4-206ENST00000538456 CCT3P49368 545 aaKnown RBP12.28□□□□□ -0.44
SMARCA4-206ENST00000538456 CSNK2A1P68400 391 aaPredicted RBP12.28□□□□□ -0.44
SMARCA4-206ENST00000538456 MERTKQ12866 999 aa12.28□□□□□ -0.44
SMARCA4-206ENST00000538456 GABRA6Q16445 453 aa12.28□□□□□ -0.44
SMARCA4-206ENST00000538456 SYT14P1Q58G82 188 aa12.28□□□□□ -0.44
SMARCA4-206ENST00000538456 PDZK1Q5T2W1 519 aa12.28□□□□□ -0.44
SMARCA4-206ENST00000538456 LIPNQ5VXI9 398 aa12.28□□□□□ -0.44
SMARCA4-206ENST00000538456 TMPPEQ6ZT21 453 aa12.28□□□□□ -0.44
SMARCA4-206ENST00000538456 OR7A2PQ8NGA2 310 aa12.28□□□□□ -0.44
SMARCA4-206ENST00000538456 OR52E4Q8NGH9 312 aa12.28□□□□□ -0.44
SMARCA4-206ENST00000538456 FBXO17Q96EF6 278 aa12.28□□□□□ -0.44
SMARCA4-206ENST00000538456 FKRPQ9H9S5 495 aa12.28□□□□□ -0.44
SMARCA4-206ENST00000538456 SERINC1Q9NRX5 453 aa12.28□□□□□ -0.44
SMARCA4-206ENST00000538456 MALT1Q9UDY8 824 aa12.28□□□□□ -0.44
SMARCA4-206ENST00000538456 TBK1Q9UHD2 729 aa12.28□□□□□ -0.44
SMARCA4-206ENST00000538456 FKBP7Q9Y680 259 aa12.28□□□□□ -0.44
SMARCA4-206ENST00000538456 IGKV3D-15A0A087WSY6 115 aa12.27□□□□□ -0.45
SMARCA4-206ENST00000538456 ZNF716A6NP11 495 aa12.27□□□□□ -0.45
SMARCA4-206ENST00000538456 ETV2O00321 342 aaPredicted RBP12.27□□□□□ -0.45
SMARCA4-206ENST00000538456 TGFAP01135 160 aa12.27□□□□□ -0.45
SMARCA4-206ENST00000538456 PROCP04070 461 aa12.27□□□□□ -0.45
SMARCA4-206ENST00000538456 UBTFL6P0CB48 400 aaPredicted RBP12.27□□□□□ -0.45
SMARCA4-206ENST00000538456 NEFHP12036 1026 aa12.27□□□□□ -0.45
SMARCA4-206ENST00000538456 BCKDHAP12694 445 aa12.27□□□□□ -0.45
SMARCA4-206ENST00000538456 APOBEC3AP31941 199 aaPredicted RBP12.27□□□□□ -0.45
SMARCA4-206ENST00000538456 SESN3P58005 492 aa12.27□□□□□ -0.45
SMARCA4-206ENST00000538456 PHC1P78364 1004 aa12.27□□□□□ -0.45
SMARCA4-206ENST00000538456 SLC25A3Q00325 362 aa12.27□□□□□ -0.45
SMARCA4-206ENST00000538456 RUNX1T1Q06455 604 aa12.27□□□□□ -0.45
SMARCA4-206ENST00000538456 SKP2Q13309 424 aa12.27□□□□□ -0.45
SMARCA4-206ENST00000538456 SQLEQ14534 574 aa12.27□□□□□ -0.45
SMARCA4-206ENST00000538456 MLC1Q15049 377 aa12.27□□□□□ -0.45
SMARCA4-206ENST00000538456 GPR68Q15743 365 aa12.27□□□□□ -0.45
SMARCA4-206ENST00000538456 WHAMMP3Q1A5X7 153 aa12.27□□□□□ -0.45
SMARCA4-206ENST00000538456 CR1LQ2VPA4 569 aa12.27□□□□□ -0.45
SMARCA4-206ENST00000538456 IQCCQ4KMZ1 466 aa12.27□□□□□ -0.45
SMARCA4-206ENST00000538456 LIPMQ5VYY2 423 aa12.27□□□□□ -0.45
SMARCA4-206ENST00000538456 OR7E24Q6IFN5 339 aa12.27□□□□□ -0.45
SMARCA4-206ENST00000538456 R3HCC1LQ7Z5L2 792 aaKnown RBP12.27□□□□□ -0.45
SMARCA4-206ENST00000538456 MTDHQ86UE4 582 aaKnown RBP12.27□□□□□ -0.45
SMARCA4-206ENST00000538456 LSRQ86X29 649 aaPredicted RBP12.27□□□□□ -0.45
SMARCA4-206ENST00000538456 NOA1Q8NC60 698 aaKnown RBP12.27□□□□□ -0.45
SMARCA4-206ENST00000538456 OR56A1Q8NGH5 318 aa12.27□□□□□ -0.45
SMARCA4-206ENST00000538456 OR5D16Q8NGK9 328 aa12.27□□□□□ -0.45
SMARCA4-206ENST00000538456 OR5AK3PQ8NH89 298 aa12.27□□□□□ -0.45
SMARCA4-206ENST00000538456 ACMSDQ8TDX5 336 aa12.27□□□□□ -0.45
SMARCA4-206ENST00000538456 MTERF3Q96E29 417 aa12.27□□□□□ -0.45
SMARCA4-206ENST00000538456 C1orf159Q96HA4 380 aa12.27□□□□□ -0.45
SMARCA4-206ENST00000538456 FOXN4Q96NZ1 517 aa12.27□□□□□ -0.45
SMARCA4-206ENST00000538456 SORCS2Q96PQ0 1159 aa12.27□□□□□ -0.45
SMARCA4-206ENST00000538456 TUBB1Q9H4B7 451 aa12.27□□□□□ -0.45
SMARCA4-206ENST00000538456 GPATCH2Q9NW75 528 aa12.27□□□□□ -0.45
SMARCA4-206ENST00000538456 DCDC2Q9UHG0 476 aa12.27□□□□□ -0.45
SMARCA4-206ENST00000538456 TENM1Q9UKZ4 2725 aa12.26□□□□□ -0.45
SMARCA4-206ENST00000538456 CENPVL1A0A0U1RR11 272 aa12.26□□□□□ -0.45
SMARCA4-206ENST00000538456 SERINC4A6NH21 518 aa12.26□□□□□ -0.45
SMARCA4-206ENST00000538456 AZIN1O14977 448 aa12.26□□□□□ -0.45
SMARCA4-206ENST00000538456 LSM1O15116 133 aaKnown RBP12.26□□□□□ -0.45
SMARCA4-206ENST00000538456 SCAMP2O15127 329 aaKnown RBP12.26□□□□□ -0.45
SMARCA4-206ENST00000538456 WIPF1O43516 503 aa12.26□□□□□ -0.45
SMARCA4-206ENST00000538456 GLRA3O75311 464 aa12.26□□□□□ -0.45
SMARCA4-206ENST00000538456 MRPL33O75394 65 aaKnown RBP12.26□□□□□ -0.45
SMARCA4-206ENST00000538456 SLU7O95391 586 aaKnown RBP12.26□□□□□ -0.45
SMARCA4-206ENST00000538456 PGRP06401 933 aa12.26□□□□□ -0.45
SMARCA4-206ENST00000538456 KRT16P08779 473 aa12.26□□□□□ -0.45
SMARCA4-206ENST00000538456 ABHD2P08910 425 aa12.26□□□□□ -0.45
SMARCA4-206ENST00000538456 LAMP1P11279 417 aa12.26□□□□□ -0.45
SMARCA4-206ENST00000538456 ASMTP46597 345 aa12.26□□□□□ -0.45
SMARCA4-206ENST00000538456 DNAJB13P59910 316 aa12.26□□□□□ -0.45
SMARCA4-206ENST00000538456 NAA20P61599 178 aa12.26□□□□□ -0.45
SMARCA4-206ENST00000538456 RPS26P62854 115 aaKnown RBP12.26□□□□□ -0.45
SMARCA4-206ENST00000538456 CASP12Q6UXS9 341 aa12.26□□□□□ -0.45
SMARCA4-206ENST00000538456 OLIG3Q7RTU3 272 aa12.26□□□□□ -0.45
SMARCA4-206ENST00000538456 CCDC103Q8IW40 242 aa12.26□□□□□ -0.45
SMARCA4-206ENST00000538456 DDIASQ8IXT1 998 aa12.26□□□□□ -0.45
SMARCA4-206ENST00000538456 ANKS4BQ8N8V4 417 aa12.26□□□□□ -0.45
SMARCA4-206ENST00000538456 WDR31Q8NA23 367 aa12.26□□□□□ -0.45
SMARCA4-206ENST00000538456 CCDC63Q8NA47 563 aa12.26□□□□□ -0.45
SMARCA4-206ENST00000538456 SLC25A43Q8WUT9 341 aaPredicted RBP12.26□□□□□ -0.45
SMARCA4-206ENST00000538456 ST8SIA1Q92185 356 aa12.26□□□□□ -0.45
SMARCA4-206ENST00000538456 ZHX1-C8orf76Q96EF9 292 aa12.26□□□□□ -0.45
SMARCA4-206ENST00000538456 MUS81Q96NY9 551 aa12.26□□□□□ -0.45
SMARCA4-206ENST00000538456 OR7D2Q96RA2 312 aa12.26□□□□□ -0.45
SMARCA4-206ENST00000538456 VRK1Q99986 396 aaPredicted RBP12.26□□□□□ -0.45
SMARCA4-206ENST00000538456 SOX7Q9BT81 388 aa12.26□□□□□ -0.45
SMARCA4-206ENST00000538456 C12orf65Q9H3J6 166 aaKnown RBP12.26□□□□□ -0.45
SMARCA4-206ENST00000538456 PSMC3IPQ9P2W1 217 aaPredicted RBP12.26□□□□□ -0.45
SMARCA4-206ENST00000538456 GIMAP2Q9UG22 337 aa12.26□□□□□ -0.45
SMARCA4-206ENST00000538456 MOKQ9UQ07 419 aa12.26□□□□□ -0.45
SMARCA4-206ENST00000538456 A0A1W2PPM1 405 aa12.25□□□□□ -0.45
SMARCA4-206ENST00000538456 NDUFS8O00217 210 aa12.25□□□□□ -0.45
SMARCA4-206ENST00000538456 GPR171O14626 319 aa12.25□□□□□ -0.45
SMARCA4-206ENST00000538456 TCF21O43680 179 aa12.25□□□□□ -0.45
SMARCA4-206ENST00000538456 C6orf47O95873 294 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms