RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 TP63Q9H3D4 680 aaPredicted RBP11.76□□□□□ -0.53
CHFR-216ENST00000538235 ALKBH4Q9NXW9 302 aa11.76□□□□□ -0.53
CHFR-216ENST00000538235 Q9UFV3 132 aa11.76□□□□□ -0.53
CHFR-216ENST00000538235 SLC5A6Q9Y289 635 aa11.76□□□□□ -0.53
CHFR-216ENST00000538235 IGKV1D-42A0A075B6H8 117 aa11.75□□□□□ -0.53
CHFR-216ENST00000538235 B2RBV5 119 aa11.75□□□□□ -0.53
CHFR-216ENST00000538235 ZNF814B7Z6K7 855 aa11.75□□□□□ -0.53
CHFR-216ENST00000538235 E9PLN8 166 aa11.75□□□□□ -0.53
CHFR-216ENST00000538235 H0Y3Z8 333 aa11.75□□□□□ -0.53
CHFR-216ENST00000538235 CXCR6O00574 342 aa11.75□□□□□ -0.53
CHFR-216ENST00000538235 TNFSF11O14788 317 aa11.75□□□□□ -0.53
CHFR-216ENST00000538235 AQP8O94778 261 aa11.75□□□□□ -0.53
CHFR-216ENST00000538235 LGI1O95970 557 aa11.75□□□□□ -0.53
CHFR-216ENST00000538235 FESP07332 822 aa11.75□□□□□ -0.53
CHFR-216ENST00000538235 GGT1P19440 569 aa11.75□□□□□ -0.53
CHFR-216ENST00000538235 PGCP20142 388 aa11.75□□□□□ -0.53
CHFR-216ENST00000538235 CCNA2P20248 432 aa11.75□□□□□ -0.53
CHFR-216ENST00000538235 ATP6V1B2P21281 511 aa11.75□□□□□ -0.53
CHFR-216ENST00000538235 TACR3P29371 465 aa11.75□□□□□ -0.53
CHFR-216ENST00000538235 KDELR2P33947 212 aa11.75□□□□□ -0.53
CHFR-216ENST00000538235 MERTKQ12866 999 aa11.75□□□□□ -0.53
CHFR-216ENST00000538235 FOXF2Q12947 444 aa11.75□□□□□ -0.53
CHFR-216ENST00000538235 BNIP2Q12982 314 aa11.75□□□□□ -0.53
CHFR-216ENST00000538235 GNA13Q14344 377 aa11.75□□□□□ -0.53
CHFR-216ENST00000538235 LARS2Q15031 903 aaKnown RBP11.75□□□□□ -0.53
CHFR-216ENST00000538235 CYBRD1Q53TN4 286 aa11.75□□□□□ -0.53
CHFR-216ENST00000538235 VTCN1Q7Z7D3 282 aa11.75□□□□□ -0.53
CHFR-216ENST00000538235 ATP6V1C2Q8NEY4 427 aa11.75□□□□□ -0.53
CHFR-216ENST00000538235 VANGL1Q8TAA9 524 aaPredicted RBP11.75□□□□□ -0.53
CHFR-216ENST00000538235 ST8SIA1Q92185 356 aa11.75□□□□□ -0.53
CHFR-216ENST00000538235 VKORC1Q9BQB6 163 aa11.75□□□□□ -0.53
CHFR-216ENST00000538235 ADAM19Q9H013 955 aa11.75□□□□□ -0.53
CHFR-216ENST00000538235 PCDHAC1Q9H158 963 aa11.75□□□□□ -0.53
CHFR-216ENST00000538235 YY1AP1Q9H869 796 aa11.75□□□□□ -0.53
CHFR-216ENST00000538235 SPAG4Q9NPE6 437 aa11.75□□□□□ -0.53
CHFR-216ENST00000538235 TAS2R1Q9NYW7 299 aa11.75□□□□□ -0.53
CHFR-216ENST00000538235 IFT52Q9Y366 437 aa11.75□□□□□ -0.53
CHFR-216ENST00000538235 SNX13Q9Y5W8 968 aa11.75□□□□□ -0.53
CHFR-216ENST00000538235 A0A1B0GWA3 101 aa11.74□□□□□ -0.53
CHFR-216ENST00000538235 MBD3L4A6NDZ8 208 aaPredicted RBP11.74□□□□□ -0.53
CHFR-216ENST00000538235 MBD3L3A6NE82 208 aaPredicted RBP11.74□□□□□ -0.53
CHFR-216ENST00000538235 TMEM247A6NEH6 219 aa11.74□□□□□ -0.53
CHFR-216ENST00000538235 MBD3L5A6NJ08 208 aaPredicted RBP11.74□□□□□ -0.53
CHFR-216ENST00000538235 EIF1AYO14602 144 aaKnown RBP11.74□□□□□ -0.53
CHFR-216ENST00000538235 CXCL13O43927 109 aa11.74□□□□□ -0.53
CHFR-216ENST00000538235 RAMP1O60894 148 aa11.74□□□□□ -0.53
CHFR-216ENST00000538235 WDR1O75083 606 aa11.74□□□□□ -0.53
CHFR-216ENST00000538235 PDE5AO76074 875 aa11.74□□□□□ -0.53
CHFR-216ENST00000538235 CLDN1O95832 211 aa11.74□□□□□ -0.53
CHFR-216ENST00000538235 ESRRAP11474 423 aaPredicted RBP11.74□□□□□ -0.53
CHFR-216ENST00000538235 IMPDH2P12268 514 aa11.74□□□□□ -0.53
CHFR-216ENST00000538235 TCN1P20061 433 aaPredicted RBP11.74□□□□□ -0.53
CHFR-216ENST00000538235 ELK4P28324 431 aa11.74□□□□□ -0.53
CHFR-216ENST00000538235 OR1E2P47887 323 aa11.74□□□□□ -0.53
CHFR-216ENST00000538235 RAC1P63000 192 aa11.74□□□□□ -0.53
CHFR-216ENST00000538235 KCNC4Q03721 635 aa11.74□□□□□ -0.53
CHFR-216ENST00000538235 EGR4Q05215 589 aa11.74□□□□□ -0.53
CHFR-216ENST00000538235 SELENBP1Q13228 472 aa11.74□□□□□ -0.53
CHFR-216ENST00000538235 ZSCAN26Q16670 478 aa11.74□□□□□ -0.53
CHFR-216ENST00000538235 ERICH5Q6P6B1 374 aa11.74□□□□□ -0.53
CHFR-216ENST00000538235 AAGABQ6PD74 315 aa11.74□□□□□ -0.53
CHFR-216ENST00000538235 GRINAQ7Z429 371 aa11.74□□□□□ -0.53
CHFR-216ENST00000538235 PATL1Q86TB9 770 aaKnown RBP11.74□□□□□ -0.53
CHFR-216ENST00000538235 ATG4DQ86TL0 474 aaPredicted RBP11.74□□□□□ -0.53
CHFR-216ENST00000538235 LILRA2Q8N149 483 aa11.74□□□□□ -0.53
CHFR-216ENST00000538235 CADM2Q8N3J6 435 aa11.74□□□□□ -0.53
CHFR-216ENST00000538235 FAM26EQ8N5C1 309 aa11.74□□□□□ -0.53
CHFR-216ENST00000538235 RELL2Q8NC24 303 aaPredicted RBP11.74□□□□□ -0.53
CHFR-216ENST00000538235 OR10D3Q8NH80 312 aa11.74□□□□□ -0.53
CHFR-216ENST00000538235 MBD3L2Q8NHZ7 208 aaPredicted RBP11.74□□□□□ -0.53
CHFR-216ENST00000538235 ZNF563Q8TA94 476 aa11.74□□□□□ -0.53
CHFR-216ENST00000538235 FNDC9Q8TBE3 224 aa11.74□□□□□ -0.53
CHFR-216ENST00000538235 KLHL15Q96M94 604 aa11.74□□□□□ -0.53
CHFR-216ENST00000538235 TRIB1Q96RU8 372 aa11.74□□□□□ -0.53
CHFR-216ENST00000538235 CDRT15Q96T59 188 aa11.74□□□□□ -0.53
CHFR-216ENST00000538235 SH3GL1Q99961 368 aa11.74□□□□□ -0.53
CHFR-216ENST00000538235 KCTD14Q9BQ13 255 aaPredicted RBP11.74□□□□□ -0.53
CHFR-216ENST00000538235 ADA2Q9NZK5 511 aa11.74□□□□□ -0.53
CHFR-216ENST00000538235 ING1Q9UK53 422 aaPredicted RBP11.74□□□□□ -0.53
CHFR-216ENST00000538235 RNF6Q9Y252 685 aa11.74□□□□□ -0.53
CHFR-216ENST00000538235 AP4B1Q9Y6B7 739 aa11.74□□□□□ -0.53
CHFR-216ENST00000538235 TMED7-TICAM2A0A0A6YYA0 188 aa11.73□□□□□ -0.53
CHFR-216ENST00000538235 IGHV3-15A0A0B4J1V0 119 aa11.73□□□□□ -0.53
CHFR-216ENST00000538235 FIGNL2A6NMB9 653 aa11.73□□□□□ -0.53
CHFR-216ENST00000538235 SYT5O00445 386 aa11.73□□□□□ -0.53
CHFR-216ENST00000538235 ADAMDEC1O15204 470 aa11.73□□□□□ -0.53
CHFR-216ENST00000538235 AGFG2O95081 481 aa11.73□□□□□ -0.53
CHFR-216ENST00000538235 GP1BBP13224 206 aa11.73□□□□□ -0.53
CHFR-216ENST00000538235 HSD17B1P14061 328 aa11.73□□□□□ -0.53
CHFR-216ENST00000538235 CALB2P22676 271 aa11.73□□□□□ -0.53
CHFR-216ENST00000538235 ADH6P28332 368 aa11.73□□□□□ -0.53
CHFR-216ENST00000538235 HTR1EP28566 365 aa11.73□□□□□ -0.53
CHFR-216ENST00000538235 CEACAM8P31997 349 aaPredicted RBP11.73□□□□□ -0.53
CHFR-216ENST00000538235 RGS8P57771 180 aaPredicted RBP11.73□□□□□ -0.53
CHFR-216ENST00000538235 LSM11P83369 360 aaKnown RBP eCLIP11.73□□□□□ -0.53
CHFR-216ENST00000538235 PMPCAQ10713 525 aa11.73□□□□□ -0.53
CHFR-216ENST00000538235 GUSBP1Q15486 140 aa11.73□□□□□ -0.53
CHFR-216ENST00000538235 BCL2A1Q16548 175 aa11.73□□□□□ -0.53
CHFR-216ENST00000538235 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.73□□□□□ -0.53
CHFR-216ENST00000538235 TMEM176BQ3YBM2 270 aaPredicted RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms