RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 TEKQ02763 1124 aa8.03□□□□□ -1.12
UBE3B-208ENST00000538070 SF3B4Q15427 424 aaKnown RBP eCLIP8.03□□□□□ -1.12
UBE3B-208ENST00000538070 PLET1Q6UQ28 207 aa8.03□□□□□ -1.12
UBE3B-208ENST00000538070 NCCRP1Q6ZVX7 275 aaPredicted RBP8.03□□□□□ -1.12
UBE3B-208ENST00000538070 MINDY2Q8NBR6 621 aa8.03□□□□□ -1.12
UBE3B-208ENST00000538070 C17orf47Q8NEP4 570 aa8.03□□□□□ -1.12
UBE3B-208ENST00000538070 C16orf52Q8NHV5 167 aa8.03□□□□□ -1.12
UBE3B-208ENST00000538070 AP3S1Q92572 193 aa8.03□□□□□ -1.12
UBE3B-208ENST00000538070 TSLPQ969D9 159 aa8.03□□□□□ -1.12
UBE3B-208ENST00000538070 TMCO6Q96DC7 493 aa8.03□□□□□ -1.12
UBE3B-208ENST00000538070 TM4SF19Q96DZ7 209 aa8.03□□□□□ -1.12
UBE3B-208ENST00000538070 NDC1Q9BTX1 674 aa8.03□□□□□ -1.12
UBE3B-208ENST00000538070 CPNE5Q9HCH3 593 aa8.03□□□□□ -1.12
UBE3B-208ENST00000538070 NKIRAS2Q9NYR9 191 aa8.03□□□□□ -1.12
UBE3B-208ENST00000538070 IGHV5-51A0A0C4DH38 117 aa8.03□□□□□ -1.12
UBE3B-208ENST00000538070 TVP23AA6NH52 213 aa8.03□□□□□ -1.12
UBE3B-208ENST00000538070 C17orf105B2RV13 164 aa8.03□□□□□ -1.12
UBE3B-208ENST00000538070 IDSB3KWA1 339 aa8.03□□□□□ -1.12
UBE3B-208ENST00000538070 TNFRSF10CO14798 259 aa8.03□□□□□ -1.12
UBE3B-208ENST00000538070 TSC22D2O75157 780 aa8.03□□□□□ -1.12
UBE3B-208ENST00000538070 NGFRP08138 427 aa8.03□□□□□ -1.12
UBE3B-208ENST00000538070 HIST1H1CP16403 213 aaKnown RBP8.03□□□□□ -1.12
UBE3B-208ENST00000538070 GABRA5P31644 462 aa8.03□□□□□ -1.12
UBE3B-208ENST00000538070 SOX2P48431 317 aa8.03□□□□□ -1.12
UBE3B-208ENST00000538070 FXYD6P3P58550 94 aa8.03□□□□□ -1.12
UBE3B-208ENST00000538070 YPEL5P62699 121 aa8.03□□□□□ -1.12
UBE3B-208ENST00000538070 HEPHL1Q6MZM0 1159 aa8.03□□□□□ -1.12
UBE3B-208ENST00000538070 OR51Q1Q8NH59 317 aa8.03□□□□□ -1.12
UBE3B-208ENST00000538070 ZNF671Q8TAW3 534 aa8.03□□□□□ -1.12
UBE3B-208ENST00000538070 HSPA12BQ96MM6 686 aa8.03□□□□□ -1.12
UBE3B-208ENST00000538070 PDCD1LG2Q9BQ51 273 aa8.03□□□□□ -1.12
UBE3B-208ENST00000538070 SP140LQ9H930 580 aa8.03□□□□□ -1.12
UBE3B-208ENST00000538070 BABAM2Q9NXR7 383 aa8.03□□□□□ -1.12
UBE3B-208ENST00000538070 ZNF221Q9UK13 617 aa8.03□□□□□ -1.12
UBE3B-208ENST00000538070 V9GYH0 126 aa8.03□□□□□ -1.12
UBE3B-208ENST00000538070 HEATR5AQ86XA9 2040 aa8.03□□□□□ -1.12
UBE3B-208ENST00000538070 KIR2DS5A0A0G2JLQ3 304 aa8.02□□□□□ -1.12
UBE3B-208ENST00000538070 A0A0G2JNG1 304 aa8.02□□□□□ -1.12
UBE3B-208ENST00000538070 MCIDASD6RGH6 385 aa8.02□□□□□ -1.12
UBE3B-208ENST00000538070 KIR2DS3K7RE56 304 aa8.02□□□□□ -1.12
UBE3B-208ENST00000538070 DOK2O60496 412 aa8.02□□□□□ -1.12
UBE3B-208ENST00000538070 HLA-DQA2P01906 255 aa8.02□□□□□ -1.12
UBE3B-208ENST00000538070 CSF3P09919 207 aa8.02□□□□□ -1.12
UBE3B-208ENST00000538070 IMPDH2P12268 514 aa8.02□□□□□ -1.12
UBE3B-208ENST00000538070 BLKP51451 505 aa8.02□□□□□ -1.12
UBE3B-208ENST00000538070 RAB38P57729 211 aa8.02□□□□□ -1.12
UBE3B-208ENST00000538070 KIR2DS5Q14953 304 aa8.02□□□□□ -1.12
UBE3B-208ENST00000538070 QPRTQ15274 297 aa8.02□□□□□ -1.12
UBE3B-208ENST00000538070 NIPAL3Q6P499 406 aa8.02□□□□□ -1.12
UBE3B-208ENST00000538070 RTL4Q6ZR62 310 aa8.02□□□□□ -1.12
UBE3B-208ENST00000538070 SSX6Q7RTT6 188 aa8.02□□□□□ -1.12
UBE3B-208ENST00000538070 ZNF511Q8NB15 262 aa8.02□□□□□ -1.12
UBE3B-208ENST00000538070 OR5J2Q8NH18 312 aa8.02□□□□□ -1.12
UBE3B-208ENST00000538070 GPBAR1Q8TDU6 330 aa8.02□□□□□ -1.12
UBE3B-208ENST00000538070 SCARF2Q96GP6 870 aaPredicted RBP8.02□□□□□ -1.12
UBE3B-208ENST00000538070 NKX3-1Q99801 234 aaPredicted RBP8.02□□□□□ -1.12
UBE3B-208ENST00000538070 SLC25A18Q9H1K4 315 aa8.02□□□□□ -1.12
UBE3B-208ENST00000538070 PPIL3Q9H2H8 161 aaKnown RBP8.02□□□□□ -1.12
UBE3B-208ENST00000538070 NEK6Q9HC98 313 aa8.02□□□□□ -1.12
UBE3B-208ENST00000538070 UCKL1Q9NWZ5 548 aa8.02□□□□□ -1.12
UBE3B-208ENST00000538070 RASD1Q9Y272 281 aa8.02□□□□□ -1.12
UBE3B-208ENST00000538070 AK6Q9Y3D8 172 aaKnown RBP8.02□□□□□ -1.12
UBE3B-208ENST00000538070 TMEM184BQ9Y519 407 aaPredicted RBP8.02□□□□□ -1.12
UBE3B-208ENST00000538070 ENTPD2Q9Y5L3 495 aa8.02□□□□□ -1.12
UBE3B-208ENST00000538070 N6AMT1Q9Y5N5 214 aa8.02□□□□□ -1.12
UBE3B-208ENST00000538070 MPDZO75970 2070 aa8.02□□□□□ -1.13
UBE3B-208ENST00000538070 TRAV6A0A075B6T7 132 aa8.02□□□□□ -1.13
UBE3B-208ENST00000538070 IGHV3-20A0A0C4DH32 117 aa8.02□□□□□ -1.13
UBE3B-208ENST00000538070 PRR19A6NJB7 356 aa8.02□□□□□ -1.13
UBE3B-208ENST00000538070 ELOA3DA6NLF2 546 aaPredicted RBP8.02□□□□□ -1.13
UBE3B-208ENST00000538070 KDM4EB2RXH2 506 aaPredicted RBP8.02□□□□□ -1.13
UBE3B-208ENST00000538070 RNF13O43567 381 aa8.02□□□□□ -1.13
UBE3B-208ENST00000538070 IDH3BO43837 385 aa8.02□□□□□ -1.13
UBE3B-208ENST00000538070 BRINP1O60477 761 aa8.02□□□□□ -1.13
UBE3B-208ENST00000538070 CPNE3O75131 537 aaKnown RBP8.02□□□□□ -1.13
UBE3B-208ENST00000538070 IL1AP01583 271 aa8.02□□□□□ -1.13
UBE3B-208ENST00000538070 HK1P19367 917 aa8.02□□□□□ -1.13
UBE3B-208ENST00000538070 TALDO1P37837 337 aa8.02□□□□□ -1.13
UBE3B-208ENST00000538070 OR1D5P58170 312 aa8.02□□□□□ -1.13
UBE3B-208ENST00000538070 ZP2Q05996 745 aa8.02□□□□□ -1.13
UBE3B-208ENST00000538070 KRR1Q13601 381 aaKnown RBP8.02□□□□□ -1.13
UBE3B-208ENST00000538070 SMAD2Q15796 467 aaKnown RBP8.02□□□□□ -1.13
UBE3B-208ENST00000538070 ELOA3BQ3SY89 546 aa8.02□□□□□ -1.13
UBE3B-208ENST00000538070 VWA2Q5GFL6 755 aa8.02□□□□□ -1.13
UBE3B-208ENST00000538070 C6orf183Q5T699 404 aa8.02□□□□□ -1.13
UBE3B-208ENST00000538070 CD300LDQ6UXZ3 194 aa8.02□□□□□ -1.13
UBE3B-208ENST00000538070 C16orf47Q6ZP98 133 aaPredicted RBP8.02□□□□□ -1.13
UBE3B-208ENST00000538070 SERPINA12Q8IW75 414 aa8.02□□□□□ -1.13
UBE3B-208ENST00000538070 CLDN22Q8N7P3 220 aa8.02□□□□□ -1.13
UBE3B-208ENST00000538070 ELOA3Q8NG57 546 aa8.02□□□□□ -1.13
UBE3B-208ENST00000538070 FYTTD1Q96QD9 318 aaKnown RBP8.02□□□□□ -1.13
UBE3B-208ENST00000538070 SRRQ9GZT4 340 aa8.02□□□□□ -1.13
UBE3B-208ENST00000538070 OR10A5Q9H207 317 aa8.02□□□□□ -1.13
UBE3B-208ENST00000538070 SEMA6CQ9H3T2 930 aa8.02□□□□□ -1.13
UBE3B-208ENST00000538070 MKKSQ9NPJ1 570 aaPredicted RBP8.02□□□□□ -1.13
UBE3B-208ENST00000538070 TRIM36Q9NQ86 728 aa8.02□□□□□ -1.13
UBE3B-208ENST00000538070 DUSP22Q9NRW4 184 aa8.02□□□□□ -1.13
UBE3B-208ENST00000538070 ING1Q9UK53 422 aaPredicted RBP8.02□□□□□ -1.13
UBE3B-208ENST00000538070 IKZF2Q9UKS7 526 aa8.02□□□□□ -1.13
UBE3B-208ENST00000538070 KNTC1P50748 2209 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms