RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 ST8SIA1Q92185 356 aa7.5□□□□□ -1.21
SPARC-208ENST00000538026 DNAJA3Q96EY1 480 aa7.5□□□□□ -1.21
SPARC-208ENST00000538026 ARL5BQ96KC2 179 aa7.5□□□□□ -1.21
SPARC-208ENST00000538026 PRR14Q9BWN1 585 aa7.5□□□□□ -1.21
SPARC-208ENST00000538026 RBM24Q9BX46 236 aaKnown RBP7.5□□□□□ -1.21
SPARC-208ENST00000538026 OR11A1Q9GZK7 315 aa7.5□□□□□ -1.21
SPARC-208ENST00000538026 RMND5AQ9H871 391 aa7.5□□□□□ -1.21
SPARC-208ENST00000538026 MCCC2Q9HCC0 563 aa7.5□□□□□ -1.21
SPARC-208ENST00000538026 SAR1AQ9NR31 198 aa7.5□□□□□ -1.21
SPARC-208ENST00000538026 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.5□□□□□ -1.21
SPARC-208ENST00000538026 P2RX2Q9UBL9 471 aa7.5□□□□□ -1.21
SPARC-208ENST00000538026 KCNN3Q9UGI6 736 aa7.5□□□□□ -1.21
SPARC-208ENST00000538026 SLC35A3Q9Y2D2 325 aa7.5□□□□□ -1.21
SPARC-208ENST00000538026 NF1P21359 2839 aa7.5□□□□□ -1.21
SPARC-208ENST00000538026 TMEM229AB2RXF0 380 aa7.49□□□□□ -1.21
SPARC-208ENST00000538026 MSTNO14793 375 aa7.49□□□□□ -1.21
SPARC-208ENST00000538026 SMAD9O15198 467 aaKnown RBP7.49□□□□□ -1.21
SPARC-208ENST00000538026 TPST2O60704 377 aa7.49□□□□□ -1.21
SPARC-208ENST00000538026 SS18L1O75177 396 aaPredicted RBP7.49□□□□□ -1.21
SPARC-208ENST00000538026 ANP32DO95626 131 aa7.49□□□□□ -1.21
SPARC-208ENST00000538026 DBIP07108 87 aaKnown RBP7.49□□□□□ -1.21
SPARC-208ENST00000538026 CD8BP10966 210 aa7.49□□□□□ -1.21
SPARC-208ENST00000538026 IMPDH2P12268 514 aa7.49□□□□□ -1.21
SPARC-208ENST00000538026 LOXP28300 417 aaPredicted RBP7.49□□□□□ -1.21
SPARC-208ENST00000538026 SSTR2P30874 369 aa7.49□□□□□ -1.21
SPARC-208ENST00000538026 MDH1P40925 334 aaKnown RBP7.49□□□□□ -1.21
SPARC-208ENST00000538026 KIR2DL3P43628 341 aa7.49□□□□□ -1.21
SPARC-208ENST00000538026 CRYBA2P53672 197 aa7.49□□□□□ -1.21
SPARC-208ENST00000538026 RPS3AP61247 264 aaKnown RBP7.49□□□□□ -1.21
SPARC-208ENST00000538026 STX1BP61266 288 aa7.49□□□□□ -1.21
SPARC-208ENST00000538026 HOXC5Q00444 222 aa7.49□□□□□ -1.21
SPARC-208ENST00000538026 MERTKQ12866 999 aa7.49□□□□□ -1.21
SPARC-208ENST00000538026 KLF10Q13118 480 aa7.49□□□□□ -1.21
SPARC-208ENST00000538026 DAZAP2Q15038 168 aaPredicted RBP7.49□□□□□ -1.21
SPARC-208ENST00000538026 SGCBQ16585 318 aa7.49□□□□□ -1.21
SPARC-208ENST00000538026 METTL21CQ5VZV1 264 aa7.49□□□□□ -1.21
SPARC-208ENST00000538026 FAM214BQ7L5A3 538 aa7.49□□□□□ -1.21
SPARC-208ENST00000538026 P4HA3Q7Z4N8 544 aa7.49□□□□□ -1.21
SPARC-208ENST00000538026 SERPINA11Q86U17 422 aa7.49□□□□□ -1.21
SPARC-208ENST00000538026 TSPYL5Q86VY4 417 aaPredicted RBP7.49□□□□□ -1.21
SPARC-208ENST00000538026 CNEP1R1Q8N9A8 125 aa7.49□□□□□ -1.21
SPARC-208ENST00000538026 NFKBIDQ8NI38 313 aa7.49□□□□□ -1.21
SPARC-208ENST00000538026 RNF128Q8TEB7 428 aa7.49□□□□□ -1.21
SPARC-208ENST00000538026 WDR60Q8WVS4 1066 aa7.49□□□□□ -1.21
SPARC-208ENST00000538026 C10orf82Q8WW14 230 aa7.49□□□□□ -1.21
SPARC-208ENST00000538026 ZNF775Q96BV0 537 aaPredicted RBP7.49□□□□□ -1.21
SPARC-208ENST00000538026 DTNBP1Q96EV8 351 aa7.49□□□□□ -1.21
SPARC-208ENST00000538026 ANKRD27Q96NW4 1050 aa7.49□□□□□ -1.21
SPARC-208ENST00000538026 LIME1Q9H400 295 aa7.49□□□□□ -1.21
SPARC-208ENST00000538026 HHATLQ9HCP6 504 aa7.49□□□□□ -1.21
SPARC-208ENST00000538026 PLSCR4Q9NRQ2 329 aa7.49□□□□□ -1.21
SPARC-208ENST00000538026 GMPR2Q9P2T1 348 aaKnown RBP7.49□□□□□ -1.21
SPARC-208ENST00000538026 OSGIN1Q9UJX0 560 aa7.49□□□□□ -1.21
SPARC-208ENST00000538026 PACSIN3Q9UKS6 424 aa7.49□□□□□ -1.21
SPARC-208ENST00000538026 USP22Q9UPT9 525 aa7.49□□□□□ -1.21
SPARC-208ENST00000538026 ZNF443Q9Y2A4 671 aaPredicted RBP7.49□□□□□ -1.21
SPARC-208ENST00000538026 HEATR1Q9H583 2144 aaKnown RBP7.48□□□□□ -1.21
SPARC-208ENST00000538026 A0A0G2JPF8 293 aa7.48□□□□□ -1.21
SPARC-208ENST00000538026 TMEM72A0PK05 275 aa7.48□□□□□ -1.21
SPARC-208ENST00000538026 HNRNPCL2B2RXH8 293 aa7.48□□□□□ -1.21
SPARC-208ENST00000538026 HNRNPCL3B7ZW38 293 aa7.48□□□□□ -1.21
SPARC-208ENST00000538026 FAAHO00519 579 aa7.48□□□□□ -1.21
SPARC-208ENST00000538026 ATP8B1O43520 1251 aa7.48□□□□□ -1.21
SPARC-208ENST00000538026 DSCAMO60469 2012 aa7.48□□□□□ -1.21
SPARC-208ENST00000538026 HNRNPCL1O60812 293 aaKnown RBP7.48□□□□□ -1.21
SPARC-208ENST00000538026 THBDP07204 575 aa7.48□□□□□ -1.21
SPARC-208ENST00000538026 THBS1P07996 1170 aa7.48□□□□□ -1.21
SPARC-208ENST00000538026 VIMP08670 466 aaKnown RBP7.48□□□□□ -1.21
SPARC-208ENST00000538026 HNRNPCL4P0DMR1 293 aa7.48□□□□□ -1.21
SPARC-208ENST00000538026 IL7RP16871 459 aa7.48□□□□□ -1.21
SPARC-208ENST00000538026 PGCP20142 388 aa7.48□□□□□ -1.21
SPARC-208ENST00000538026 CCNA2P20248 432 aa7.48□□□□□ -1.21
SPARC-208ENST00000538026 HTR2AP28223 471 aa7.48□□□□□ -1.21
SPARC-208ENST00000538026 TACR3P29371 465 aa7.48□□□□□ -1.21
SPARC-208ENST00000538026 AGTR1P30556 359 aa7.48□□□□□ -1.21
SPARC-208ENST00000538026 SLC1A3P43003 542 aa7.48□□□□□ -1.21
SPARC-208ENST00000538026 PCYT1AP49585 367 aa7.48□□□□□ -1.21
SPARC-208ENST00000538026 GYS2P54840 703 aa7.48□□□□□ -1.21
SPARC-208ENST00000538026 PCBP3P57721 371 aaKnown RBP7.48□□□□□ -1.21
SPARC-208ENST00000538026 MTPNP58546 118 aa7.48□□□□□ -1.21
SPARC-208ENST00000538026 RAC3P60763 192 aa7.48□□□□□ -1.21
SPARC-208ENST00000538026 IRX1P78414 480 aaPredicted RBP7.48□□□□□ -1.21
SPARC-208ENST00000538026 H3F3AP84243 136 aa7.48□□□□□ -1.21
SPARC-208ENST00000538026 CDK6Q00534 326 aa7.48□□□□□ -1.21
SPARC-208ENST00000538026 SORDQ00796 357 aa7.48□□□□□ -1.21
SPARC-208ENST00000538026 FADDQ13158 208 aa7.48□□□□□ -1.21
SPARC-208ENST00000538026 MYBPHQ13203 477 aa7.48□□□□□ -1.21
SPARC-208ENST00000538026 SELENBP1Q13228 472 aa7.48□□□□□ -1.21
SPARC-208ENST00000538026 CAPRIN1Q14444 709 aaKnown RBP7.48□□□□□ -1.21
SPARC-208ENST00000538026 SYT14P1Q58G82 188 aa7.48□□□□□ -1.21
SPARC-208ENST00000538026 GCNT6Q5T4J0 391 aa7.48□□□□□ -1.21
SPARC-208ENST00000538026 RNF220Q5VTB9 566 aa7.48□□□□□ -1.21
SPARC-208ENST00000538026 PRAMEF8Q5VWM4 474 aa7.48□□□□□ -1.21
SPARC-208ENST00000538026 PRAMEF7Q5VXH5 474 aa7.48□□□□□ -1.21
SPARC-208ENST00000538026 OR2A2Q6IF42 318 aa7.48□□□□□ -1.21
SPARC-208ENST00000538026 TMPPEQ6ZT21 453 aa7.48□□□□□ -1.21
SPARC-208ENST00000538026 CHMP1BQ7LBR1 199 aa7.48□□□□□ -1.21
SPARC-208ENST00000538026 GRINAQ7Z429 371 aa7.48□□□□□ -1.21
SPARC-208ENST00000538026 NET1Q7Z628 596 aaPredicted RBP7.48□□□□□ -1.21
SPARC-208ENST00000538026 DHDDSQ86SQ9 333 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms