RNA–Protein interactions for RNA: ENST00000537842.5

TNFRSF1A-210, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 404 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-210ENST00000537842 UPB1Q9UBR1 384 aa2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 LNPEPQ9UIQ6 1025 aa2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 TRMT6Q9UJA5 497 aaKnown RBP2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 RARRES3Q9UL19 164 aa2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 FARSAQ9Y285 508 aaKnown RBP2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 B3GNT3Q9Y2A9 372 aa2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 DLGAP4Q9Y2H0 992 aa2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 PLEKHA6Q9Y2H5 1048 aa2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 WBP11Q9Y2W2 641 aaKnown RBP2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 RNF11Q9Y3C5 154 aa2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 GRIP1Q9Y3R0 1128 aa2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 CSAG2Q9Y5P2 127 aa2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 SIRT4Q9Y6E7 314 aaPredicted RBP2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 CEPT1Q9Y6K0 416 aa2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 DNAJC13O75165 2243 aa2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 ROS1P08922 2347 aa2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 PDZD2O15018 2839 aa2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 ESPL1Q14674 2120 aa2.35□□□□□ -2.03
TNFRSF1A-210ENST00000537842 ABCA4P78363 2273 aa2.34□□□□□ -2.03
TNFRSF1A-210ENST00000537842 PKDREJQ9NTG1 2253 aa2.34□□□□□ -2.03
TNFRSF1A-210ENST00000537842 DNHD1Q96M86 4753 aa2.34□□□□□ -2.03
TNFRSF1A-210ENST00000537842 NUP214P35658 2090 aaPredicted RBP2.34□□□□□ -2.03
TNFRSF1A-210ENST00000537842 IGLV3-12A0A075B6K2 115 aa2.34□□□□□ -2.03
TNFRSF1A-210ENST00000537842 A0A0A6YYC8 382 aaPredicted RBP2.34□□□□□ -2.03
TNFRSF1A-210ENST00000537842 IGHV3-20A0A0C4DH32 117 aa2.34□□□□□ -2.03
TNFRSF1A-210ENST00000537842 ELOVL7A1L3X0 281 aa2.34□□□□□ -2.03
TNFRSF1A-210ENST00000537842 HYKKA2RU49 373 aa2.34□□□□□ -2.03
TNFRSF1A-210ENST00000537842 LRIT2A6NDA9 550 aa2.34□□□□□ -2.03
TNFRSF1A-210ENST00000537842 C5orf52A6NGY3 159 aa2.34□□□□□ -2.03
TNFRSF1A-210ENST00000537842 ZNF860A6NHJ4 632 aa2.34□□□□□ -2.03
TNFRSF1A-210ENST00000537842 LINC01548A6NM66 108 aa2.34□□□□□ -2.03
TNFRSF1A-210ENST00000537842 CYSRT1A8MQ03 144 aa2.34□□□□□ -2.03
TNFRSF1A-210ENST00000537842 TRIM49D1C9J1S8 452 aa2.34□□□□□ -2.03
TNFRSF1A-210ENST00000537842 POC1B-GALNT4F8VUJ3 575 aa2.34□□□□□ -2.03
TNFRSF1A-210ENST00000537842 G3V2L1 256 aa2.34□□□□□ -2.03
TNFRSF1A-210ENST00000537842 I3L1I5 382 aaPredicted RBP2.34□□□□□ -2.03
TNFRSF1A-210ENST00000537842 SGK494L7N484 410 aa2.34□□□□□ -2.03
TNFRSF1A-210ENST00000537842 UBFD1O14562 309 aaKnown RBP2.34□□□□□ -2.03
TNFRSF1A-210ENST00000537842 NDUFS4O43181 175 aa2.34□□□□□ -2.03
TNFRSF1A-210ENST00000537842 OR1F1O43749 312 aa2.34□□□□□ -2.03
TNFRSF1A-210ENST00000537842 PRKNO60260 465 aaPredicted RBP2.34□□□□□ -2.03
TNFRSF1A-210ENST00000537842 ZNF354AO60765 605 aaPredicted RBP2.34□□□□□ -2.03
TNFRSF1A-210ENST00000537842 TBX19O60806 448 aa2.34□□□□□ -2.03
TNFRSF1A-210ENST00000537842 PRAMEF2O60811 474 aa2.34□□□□□ -2.03
TNFRSF1A-210ENST00000537842 SH3BGRLO75368 114 aa2.34□□□□□ -2.03
TNFRSF1A-210ENST00000537842 NME6O75414 186 aaPredicted RBP2.34□□□□□ -2.03
TNFRSF1A-210ENST00000537842 E2F6O75461 281 aa2.34□□□□□ -2.03
TNFRSF1A-210ENST00000537842 PRKRAO75569 313 aaKnown RBP2.34□□□□□ -2.03
TNFRSF1A-210ENST00000537842 CREG1O75629 220 aa2.34□□□□□ -2.03
TNFRSF1A-210ENST00000537842 PDE9AO76083 593 aa2.34□□□□□ -2.03
TNFRSF1A-210ENST00000537842 GLCEO94923 617 aa2.34□□□□□ -2.03
TNFRSF1A-210ENST00000537842 KLHL2O95198 593 aa2.34□□□□□ -2.03
TNFRSF1A-210ENST00000537842 BMP10O95393 424 aa2.34□□□□□ -2.03
TNFRSF1A-210ENST00000537842 CH25HO95992 272 aa2.34□□□□□ -2.03
TNFRSF1A-210ENST00000537842 CATP04040 527 aaKnown RBP2.34□□□□□ -2.03
TNFRSF1A-210ENST00000537842 C8GP07360 202 aa2.34□□□□□ -2.03
TNFRSF1A-210ENST00000537842 GSTA2P09210 222 aa2.34□□□□□ -2.03
TNFRSF1A-210ENST00000537842 RAB40ALP0C0E4 278 aa2.34□□□□□ -2.03
TNFRSF1A-210ENST00000537842 ETFAP13804 333 aa2.34□□□□□ -2.03
TNFRSF1A-210ENST00000537842 ENO3P13929 434 aaPredicted RBP2.34□□□□□ -2.03
TNFRSF1A-210ENST00000537842 IL1RNP18510 177 aa2.34□□□□□ -2.03
TNFRSF1A-210ENST00000537842 TSPAN8P19075 237 aa2.34□□□□□ -2.03
TNFRSF1A-210ENST00000537842 TCN2P20062 427 aa2.34□□□□□ -2.03
TNFRSF1A-210ENST00000537842 CALB2P22676 271 aa2.34□□□□□ -2.03
TNFRSF1A-210ENST00000537842 CD82P27701 267 aa2.34□□□□□ -2.03
TNFRSF1A-210ENST00000537842 TNFRSF8P28908 595 aa2.34□□□□□ -2.03
TNFRSF1A-210ENST00000537842 PTPN4P29074 926 aa2.34□□□□□ -2.03
TNFRSF1A-210ENST00000537842 CRABP2P29373 138 aa2.34□□□□□ -2.03
TNFRSF1A-210ENST00000537842 PPP2R1BP30154 601 aa2.34□□□□□ -2.03
TNFRSF1A-210ENST00000537842 SLC6A6P31641 620 aa2.34□□□□□ -2.03
TNFRSF1A-210ENST00000537842 RPA3P35244 121 aaPredicted RBP2.34□□□□□ -2.03
TNFRSF1A-210ENST00000537842 SPRP35270 261 aaPredicted RBP2.34□□□□□ -2.03
TNFRSF1A-210ENST00000537842 IER3P46695 156 aa2.34□□□□□ -2.03
TNFRSF1A-210ENST00000537842 SLCO1A2P46721 670 aa2.34□□□□□ -2.03
TNFRSF1A-210ENST00000537842 CEBPDP49716 269 aaPredicted RBP2.34□□□□□ -2.03
TNFRSF1A-210ENST00000537842 CDH13P55290 713 aa2.34□□□□□ -2.03
TNFRSF1A-210ENST00000537842 FOXA1P55317 472 aa2.34□□□□□ -2.03
TNFRSF1A-210ENST00000537842 RAB8AP61006 207 aa2.34□□□□□ -2.03
TNFRSF1A-210ENST00000537842 SNRPEP62304 92 aaKnown RBP2.34□□□□□ -2.03
TNFRSF1A-210ENST00000537842 BTG2P78543 158 aa2.34□□□□□ -2.03
TNFRSF1A-210ENST00000537842 DCDP81605 110 aaKnown RBP2.34□□□□□ -2.03
TNFRSF1A-210ENST00000537842 HOXA4Q00056 320 aaPredicted RBP2.34□□□□□ -2.03
TNFRSF1A-210ENST00000537842 CDKL1Q00532 357 aa2.34□□□□□ -2.03
TNFRSF1A-210ENST00000537842 ACY1Q03154 408 aa2.34□□□□□ -2.03
TNFRSF1A-210ENST00000537842 RELAQ04206 551 aa2.34□□□□□ -2.03
TNFRSF1A-210ENST00000537842 SLC18A2Q05940 514 aa2.34□□□□□ -2.03
TNFRSF1A-210ENST00000537842 CKAP4Q07065 602 aaKnown RBP2.34□□□□□ -2.03
TNFRSF1A-210ENST00000537842 KLC1Q07866 573 aa2.34□□□□□ -2.03
TNFRSF1A-210ENST00000537842 SRSF1Q07955 248 aaKnown RBP eCLIP2.34□□□□□ -2.03
TNFRSF1A-210ENST00000537842 SRSF4Q08170 494 aaKnown RBP2.34□□□□□ -2.03
TNFRSF1A-210ENST00000537842 LCP2Q13094 533 aa2.34□□□□□ -2.03
TNFRSF1A-210ENST00000537842 PRKAA1Q13131 559 aa2.34□□□□□ -2.03
TNFRSF1A-210ENST00000537842 CHIT1Q13231 466 aa2.34□□□□□ -2.03
TNFRSF1A-210ENST00000537842 DOC2AQ14183 400 aa2.34□□□□□ -2.03
TNFRSF1A-210ENST00000537842 NCF4Q15080 339 aa2.34□□□□□ -2.03
TNFRSF1A-210ENST00000537842 TATDN3Q17R31 274 aa2.34□□□□□ -2.03
TNFRSF1A-210ENST00000537842 VWC2Q2TAL6 325 aa2.34□□□□□ -2.03
TNFRSF1A-210ENST00000537842 MAJINQ3KP22 176 aa2.34□□□□□ -2.03
TNFRSF1A-210ENST00000537842 SLC36A3Q495N2 470 aa2.34□□□□□ -2.03
TNFRSF1A-210ENST00000537842 NADK2Q4G0N4 442 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms