RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 SRP9P49458 86 aaKnown RBP13.21□□□□□ -0.29
USP44-203ENST00000537435 BICRALQ6AI39 1079 aa13.21□□□□□ -0.29
USP44-203ENST00000537435 DGAT2L6Q6ZPD8 337 aa13.21□□□□□ -0.29
USP44-203ENST00000537435 KRT74Q7RTS7 529 aa13.21□□□□□ -0.29
USP44-203ENST00000537435 CA13Q8N1Q1 262 aa13.21□□□□□ -0.29
USP44-203ENST00000537435 RFLNBQ8N5W9 214 aa13.21□□□□□ -0.29
USP44-203ENST00000537435 ASB12Q8WXK4 309 aa13.21□□□□□ -0.29
USP44-203ENST00000537435 GHSRQ92847 366 aa13.21□□□□□ -0.29
USP44-203ENST00000537435 SMAD5Q99717 465 aaKnown RBP13.21□□□□□ -0.29
USP44-203ENST00000537435 DZANK1Q9NVP4 752 aa13.21□□□□□ -0.29
USP44-203ENST00000537435 HAO2Q9NYQ3 351 aa13.21□□□□□ -0.29
USP44-203ENST00000537435 BAIAP2Q9UQB8 552 aa13.21□□□□□ -0.29
USP44-203ENST00000537435 CACNG2Q9Y698 323 aa13.21□□□□□ -0.29
USP44-203ENST00000537435 KLF8O95600 359 aaPredicted RBP13.21□□□□□ -0.29
USP44-203ENST00000537435 APBB3O95704 486 aa13.21□□□□□ -0.29
USP44-203ENST00000537435 RAB3BP20337 219 aa13.21□□□□□ -0.29
USP44-203ENST00000537435 EMDP50402 254 aa13.21□□□□□ -0.29
USP44-203ENST00000537435 HCCSP53701 268 aa13.21□□□□□ -0.29
USP44-203ENST00000537435 NRG3P56975 720 aa13.21□□□□□ -0.29
USP44-203ENST00000537435 BTG1P62324 171 aa13.21□□□□□ -0.29
USP44-203ENST00000537435 ACTC1P68032 377 aa13.21□□□□□ -0.29
USP44-203ENST00000537435 ACTA1P68133 377 aa13.21□□□□□ -0.29
USP44-203ENST00000537435 MRPL28Q13084 256 aaKnown RBP13.21□□□□□ -0.29
USP44-203ENST00000537435 BTBD16Q32M84 506 aa13.21□□□□□ -0.29
USP44-203ENST00000537435 PYHIN1Q6K0P9 492 aa13.21□□□□□ -0.29
USP44-203ENST00000537435 ANKRD54Q6NXT1 300 aa13.21□□□□□ -0.29
USP44-203ENST00000537435 RTL4Q6ZR62 310 aa13.21□□□□□ -0.29
USP44-203ENST00000537435 NANOGNBQ7Z5D8 188 aa13.21□□□□□ -0.29
USP44-203ENST00000537435 BAHD1Q8TBE0 780 aaPredicted RBP13.21□□□□□ -0.29
USP44-203ENST00000537435 DEDD2Q8WXF8 326 aa13.21□□□□□ -0.29
USP44-203ENST00000537435 CTHRC1Q96CG8 243 aa13.21□□□□□ -0.29
USP44-203ENST00000537435 GTPBP2Q9BX10 602 aaKnown RBP13.21□□□□□ -0.29
USP44-203ENST00000537435 MCCC2Q9HCC0 563 aa13.21□□□□□ -0.29
USP44-203ENST00000537435 STARD5Q9NSY2 213 aa13.21□□□□□ -0.29
USP44-203ENST00000537435 CLEC4AQ9UMR7 237 aa13.21□□□□□ -0.29
USP44-203ENST00000537435 NCKAP1Q9Y2A7 1128 aa13.21□□□□□ -0.29
USP44-203ENST00000537435 DNAH14Q0VDD8 3507 aa13.2□□□□□ -0.3
USP44-203ENST00000537435 AKR7A2O43488 359 aa13.2□□□□□ -0.3
USP44-203ENST00000537435 GALR3O60755 368 aaPredicted RBP13.2□□□□□ -0.3
USP44-203ENST00000537435 SOX30O94993 753 aa13.2□□□□□ -0.3
USP44-203ENST00000537435 NKX2-2O95096 273 aa13.2□□□□□ -0.3
USP44-203ENST00000537435 CBX7O95931 251 aa13.2□□□□□ -0.3
USP44-203ENST00000537435 IFNGP01579 166 aa13.2□□□□□ -0.3
USP44-203ENST00000537435 SLC6A6P31641 620 aa13.2□□□□□ -0.3
USP44-203ENST00000537435 BTCP35070 178 aa13.2□□□□□ -0.3
USP44-203ENST00000537435 SRP54P61011 504 aaKnown RBP13.2□□□□□ -0.3
USP44-203ENST00000537435 SNRPD2P62316 118 aaKnown RBP13.2□□□□□ -0.3
USP44-203ENST00000537435 CRYZQ08257 329 aaKnown RBP13.2□□□□□ -0.3
USP44-203ENST00000537435 NTRK2Q16620 822 aa13.2□□□□□ -0.3
USP44-203ENST00000537435 ALG11Q2TAA5 492 aa13.2□□□□□ -0.3
USP44-203ENST00000537435 TP53I3Q53FA7 332 aa13.2□□□□□ -0.3
USP44-203ENST00000537435 ALG10BQ5I7T1 473 aa13.2□□□□□ -0.3
USP44-203ENST00000537435 CADM2Q8N3J6 435 aa13.2□□□□□ -0.3
USP44-203ENST00000537435 ARL14Q8N4G2 192 aa13.2□□□□□ -0.3
USP44-203ENST00000537435 SDR9C7Q8NEX9 313 aa13.2□□□□□ -0.3
USP44-203ENST00000537435 OR52E2Q8NGJ4 325 aa13.2□□□□□ -0.3
USP44-203ENST00000537435 OR5H6Q8NGV6 325 aa13.2□□□□□ -0.3
USP44-203ENST00000537435 SLC2A12Q8TD20 617 aa13.2□□□□□ -0.3
USP44-203ENST00000537435 RSC1A1Q92681 617 aa13.2□□□□□ -0.3
USP44-203ENST00000537435 PMM1Q92871 262 aa13.2□□□□□ -0.3
USP44-203ENST00000537435 ANKRD9Q96BM1 317 aaPredicted RBP13.2□□□□□ -0.3
USP44-203ENST00000537435 ZMYND19Q96E35 227 aaPredicted RBP13.2□□□□□ -0.3
USP44-203ENST00000537435 ERMAPQ96PL5 475 aaPredicted RBP13.2□□□□□ -0.3
USP44-203ENST00000537435 POLE3Q9NRF9 147 aa13.2□□□□□ -0.3
USP44-203ENST00000537435 ST6GALNAC2Q9UJ37 374 aa13.2□□□□□ -0.3
USP44-203ENST00000537435 A0A1W2PPK0 400 aa13.2□□□□□ -0.3
USP44-203ENST00000537435 MAGEB4O15481 346 aaPredicted RBP13.2□□□□□ -0.3
USP44-203ENST00000537435 FHL1Q13642 323 aa13.2□□□□□ -0.3
USP44-203ENST00000537435 TMEM31Q5JXX7 168 aa13.2□□□□□ -0.3
USP44-203ENST00000537435 BCL2L15Q5TBC7 163 aa13.2□□□□□ -0.3
USP44-203ENST00000537435 ARHGAP11AQ6P4F7 1023 aa13.2□□□□□ -0.3
USP44-203ENST00000537435 C7orf61Q8IZ16 206 aa13.2□□□□□ -0.3
USP44-203ENST00000537435 MS4A15Q8N5U1 240 aa13.2□□□□□ -0.3
USP44-203ENST00000537435 ZNF655Q8N720 491 aaPredicted RBP13.2□□□□□ -0.3
USP44-203ENST00000537435 CSNK1A1LQ8N752 337 aa13.2□□□□□ -0.3
USP44-203ENST00000537435 ZNF426Q9BUY5 554 aa13.2□□□□□ -0.3
USP44-203ENST00000537435 TRAF4Q9BUZ4 470 aaPredicted RBP13.2□□□□□ -0.3
USP44-203ENST00000537435 TMEM106CQ9BVX2 250 aa13.2□□□□□ -0.3
USP44-203ENST00000537435 TRAV6A0A075B6T7 132 aa13.19□□□□□ -0.3
USP44-203ENST00000537435 A0A0A6YYJ9 748 aa13.19□□□□□ -0.3
USP44-203ENST00000537435 C2orf74A8MZ97 194 aa13.19□□□□□ -0.3
USP44-203ENST00000537435 LINC01565O15544 149 aa13.19□□□□□ -0.3
USP44-203ENST00000537435 OR2B3O76000 313 aa13.19□□□□□ -0.3
USP44-203ENST00000537435 EGFP01133 1207 aa13.19□□□□□ -0.3
USP44-203ENST00000537435 TFP02787 698 aa13.19□□□□□ -0.3
USP44-203ENST00000537435 HNRNPA2B1P22626 353 aaKnown RBP13.19□□□□□ -0.3
USP44-203ENST00000537435 ACAA2P42765 397 aaKnown RBP13.19□□□□□ -0.3
USP44-203ENST00000537435 PSG6Q00889 435 aa13.19□□□□□ -0.3
USP44-203ENST00000537435 POU4F2Q12837 409 aa13.19□□□□□ -0.3
USP44-203ENST00000537435 LAMTOR1Q6IAA8 161 aa13.19□□□□□ -0.3
USP44-203ENST00000537435 RNF44Q7L0R7 432 aa13.19□□□□□ -0.3
USP44-203ENST00000537435 SYT9Q86SS6 491 aa13.19□□□□□ -0.3
USP44-203ENST00000537435 SFTPA2Q8IWL1 248 aa13.19□□□□□ -0.3
USP44-203ENST00000537435 OR4N2Q8NGD1 307 aa13.19□□□□□ -0.3
USP44-203ENST00000537435 OR4K13Q8NH42 304 aa13.19□□□□□ -0.3
USP44-203ENST00000537435 FBRSQ9HAH7 460 aa13.19□□□□□ -0.3
USP44-203ENST00000537435 DNAJB12Q9NXW2 375 aaKnown RBP13.19□□□□□ -0.3
USP44-203ENST00000537435 A0A0B4J203 849 aa13.19□□□□□ -0.3
USP44-203ENST00000537435 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.19□□□□□ -0.3
USP44-203ENST00000537435 GNB5O14775 395 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms