RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 A0A1B0GUS0 222 aa4.02□□□□□ -1.77
PRKDC-208ENST00000536710 A0A1B0GWB2 263 aa4.02□□□□□ -1.77
PRKDC-208ENST00000536710 TMEM110-MUSTN1A8MSY1 372 aa4.02□□□□□ -1.77
PRKDC-208ENST00000536710 TRDCB7Z8K6 153 aa4.02□□□□□ -1.77
PRKDC-208ENST00000536710 F5H6K3 240 aa4.02□□□□□ -1.77
PRKDC-208ENST00000536710 CXCL13O43927 109 aa4.02□□□□□ -1.77
PRKDC-208ENST00000536710 ATP5LO75964 103 aa4.02□□□□□ -1.77
PRKDC-208ENST00000536710 POU2F1P14859 743 aa4.02□□□□□ -1.77
PRKDC-208ENST00000536710 MAGEA8P43361 318 aa4.02□□□□□ -1.77
PRKDC-208ENST00000536710 KIR2DS2P43631 304 aa4.02□□□□□ -1.77
PRKDC-208ENST00000536710 CCT3P49368 545 aaKnown RBP4.02□□□□□ -1.77
PRKDC-208ENST00000536710 TAF6P49848 677 aa4.02□□□□□ -1.77
PRKDC-208ENST00000536710 EFNB2P52799 333 aa4.02□□□□□ -1.77
PRKDC-208ENST00000536710 CHRNB3Q05901 458 aa4.02□□□□□ -1.77
PRKDC-208ENST00000536710 KLRC3Q07444 240 aa4.02□□□□□ -1.77
PRKDC-208ENST00000536710 DPYSL2Q16555 572 aa4.02□□□□□ -1.77
PRKDC-208ENST00000536710 AANATQ16613 207 aa4.02□□□□□ -1.77
PRKDC-208ENST00000536710 DMRTC1Q5HYR2 192 aa4.02□□□□□ -1.77
PRKDC-208ENST00000536710 OR2B11Q5JQS5 317 aa4.02□□□□□ -1.77
PRKDC-208ENST00000536710 ARCQ7LC44 396 aa4.02□□□□□ -1.77
PRKDC-208ENST00000536710 NBPF5PQ86XG9 351 aaPredicted RBP4.02□□□□□ -1.77
PRKDC-208ENST00000536710 FBXO16Q8IX29 292 aaPredicted RBP4.02□□□□□ -1.77
PRKDC-208ENST00000536710 OR13C2Q8NGS9 318 aa4.02□□□□□ -1.77
PRKDC-208ENST00000536710 EFHD2Q96C19 240 aaPredicted RBP4.02□□□□□ -1.77
PRKDC-208ENST00000536710 TIMD4Q96H15 378 aa4.02□□□□□ -1.77
PRKDC-208ENST00000536710 TCEANC2Q96MN5 208 aa4.02□□□□□ -1.77
PRKDC-208ENST00000536710 SLC38A2Q96QD8 506 aa4.02□□□□□ -1.77
PRKDC-208ENST00000536710 COPS8Q99627 209 aa4.02□□□□□ -1.77
PRKDC-208ENST00000536710 SLC39A3Q9BRY0 314 aa4.02□□□□□ -1.77
PRKDC-208ENST00000536710 CNPY3Q9BT09 278 aa4.02□□□□□ -1.77
PRKDC-208ENST00000536710 C19orf24Q9BVV8 132 aa4.02□□□□□ -1.77
PRKDC-208ENST00000536710 NMUR2Q9GZQ4 415 aa4.02□□□□□ -1.77
PRKDC-208ENST00000536710 PTGES2Q9H7Z7 377 aa4.02□□□□□ -1.77
PRKDC-208ENST00000536710 B3GNT2Q9NY97 397 aa4.02□□□□□ -1.77
PRKDC-208ENST00000536710 CLEC4EQ9ULY5 219 aa4.02□□□□□ -1.77
PRKDC-208ENST00000536710 PRPF19Q9UMS4 504 aaKnown RBP4.02□□□□□ -1.77
PRKDC-208ENST00000536710 COPS3Q9UNS2 423 aa4.02□□□□□ -1.77
PRKDC-208ENST00000536710 RPAP1Q9BWH6 1393 aaPredicted RBP4.02□□□□□ -1.77
PRKDC-208ENST00000536710 FAM168BA1KXE4 195 aa4.01□□□□□ -1.77
PRKDC-208ENST00000536710 TUBAL3A6NHL2 446 aa4.01□□□□□ -1.77
PRKDC-208ENST00000536710 TRIM64CA6NLI5 447 aa4.01□□□□□ -1.77
PRKDC-208ENST00000536710 HIP1O00291 1037 aa4.01□□□□□ -1.77
PRKDC-208ENST00000536710 TNFSF11O14788 317 aa4.01□□□□□ -1.77
PRKDC-208ENST00000536710 MED7O43513 233 aa4.01□□□□□ -1.77
PRKDC-208ENST00000536710 PFKFB2O60825 505 aa4.01□□□□□ -1.77
PRKDC-208ENST00000536710 PALMO75781 387 aa4.01□□□□□ -1.77
PRKDC-208ENST00000536710 SLITRK3O94933 977 aa4.01□□□□□ -1.77
PRKDC-208ENST00000536710 SNX4O95219 450 aa4.01□□□□□ -1.77
PRKDC-208ENST00000536710 AP2A1O95782 977 aa4.01□□□□□ -1.77
PRKDC-208ENST00000536710 LALBAP00709 142 aa4.01□□□□□ -1.77
PRKDC-208ENST00000536710 GIG44P09565 113 aaPredicted RBP4.01□□□□□ -1.77
PRKDC-208ENST00000536710 IGLL1P15814 213 aa4.01□□□□□ -1.77
PRKDC-208ENST00000536710 GNA11P29992 359 aa4.01□□□□□ -1.77
PRKDC-208ENST00000536710 SLC26A2P50443 739 aa4.01□□□□□ -1.77
PRKDC-208ENST00000536710 PLK1P53350 603 aa4.01□□□□□ -1.77
PRKDC-208ENST00000536710 DDX39BQ13838 428 aaKnown RBP4.01□□□□□ -1.77
PRKDC-208ENST00000536710 KIAA0040Q15053 153 aa4.01□□□□□ -1.77
PRKDC-208ENST00000536710 PRR4Q16378 134 aa4.01□□□□□ -1.77
PRKDC-208ENST00000536710 ZNF239Q16600 458 aaKnown RBP4.01□□□□□ -1.77
PRKDC-208ENST00000536710 LRRC36Q1X8D7 754 aa4.01□□□□□ -1.77
PRKDC-208ENST00000536710 UTF1Q5T230 341 aa4.01□□□□□ -1.77
PRKDC-208ENST00000536710 SKA3Q8IX90 412 aa4.01□□□□□ -1.77
PRKDC-208ENST00000536710 MFSD9Q8NBP5 474 aa4.01□□□□□ -1.77
PRKDC-208ENST00000536710 OR10H4Q8NGA5 316 aa4.01□□□□□ -1.77
PRKDC-208ENST00000536710 ANKRD49Q8WVL7 239 aa4.01□□□□□ -1.77
PRKDC-208ENST00000536710 GAL3ST1Q99999 423 aa4.01□□□□□ -1.77
PRKDC-208ENST00000536710 ADAM28Q9UKQ2 775 aa4.01□□□□□ -1.77
PRKDC-208ENST00000536710 ERVW-1Q9UQF0 538 aa4.01□□□□□ -1.77
PRKDC-208ENST00000536710 GON4LQ3T8J9 2241 aa4.01□□□□□ -1.77
PRKDC-208ENST00000536710 KLF18A0A0U1RQI7 1052 aa4□□□□□ -1.77
PRKDC-208ENST00000536710 A0A1B0GVL5 298 aa4□□□□□ -1.77
PRKDC-208ENST00000536710 SERF1AO75920 110 aa4□□□□□ -1.77
PRKDC-208ENST00000536710 LGALS2P05162 132 aa4□□□□□ -1.77
PRKDC-208ENST00000536710 ZP3P21754 424 aa4□□□□□ -1.77
PRKDC-208ENST00000536710 PBLDP30039 288 aaPredicted RBP4□□□□□ -1.77
PRKDC-208ENST00000536710 HTR1FP30939 366 aa4□□□□□ -1.77
PRKDC-208ENST00000536710 TAGLN2P37802 199 aaKnown RBP4□□□□□ -1.77
PRKDC-208ENST00000536710 SSR1P43307 286 aaKnown RBP4□□□□□ -1.77
PRKDC-208ENST00000536710 ATP1B3P54709 279 aa4□□□□□ -1.77
PRKDC-208ENST00000536710 PKNOX1P55347 436 aa4□□□□□ -1.77
PRKDC-208ENST00000536710 CCDC173Q0VFZ6 552 aa4□□□□□ -1.77
PRKDC-208ENST00000536710 IMMTQ16891 758 aaKnown RBP4□□□□□ -1.77
PRKDC-208ENST00000536710 RABL6Q3YEC7 729 aaPredicted RBP4□□□□□ -1.77
PRKDC-208ENST00000536710 CFAP221Q4G0U5 840 aa4□□□□□ -1.77
PRKDC-208ENST00000536710 FILIP1LQ4L180 1135 aa4□□□□□ -1.77
PRKDC-208ENST00000536710 BOLA3Q53S33 107 aa4□□□□□ -1.77
PRKDC-208ENST00000536710 SFT2D3Q587I9 215 aa4□□□□□ -1.77
PRKDC-208ENST00000536710 PHYHD1Q5SRE7 291 aa4□□□□□ -1.77
PRKDC-208ENST00000536710 TFAP2EQ6VUC0 442 aa4□□□□□ -1.77
PRKDC-208ENST00000536710 UTS2BQ765I0 119 aa4□□□□□ -1.77
PRKDC-208ENST00000536710 ZNF589Q86UQ0 364 aaPredicted RBP4□□□□□ -1.77
PRKDC-208ENST00000536710 LRRC75A-AS1Q8N1F1 130 aa4□□□□□ -1.77
PRKDC-208ENST00000536710 OR2L13Q8N349 312 aa4□□□□□ -1.77
PRKDC-208ENST00000536710 OR56B4Q8NH76 319 aa4□□□□□ -1.77
PRKDC-208ENST00000536710 ZPLD1Q8TCW7 415 aa4□□□□□ -1.77
PRKDC-208ENST00000536710 SCFD1Q8WVM8 642 aa4□□□□□ -1.77
PRKDC-208ENST00000536710 FBXO32Q969P5 355 aa4□□□□□ -1.77
PRKDC-208ENST00000536710 NEIL2Q969S2 332 aa4□□□□□ -1.77
PRKDC-208ENST00000536710 CNOT6LQ96LI5 555 aaKnown RBP4□□□□□ -1.77
PRKDC-208ENST00000536710 CLCC1Q96S66 551 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms