RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 ARMC8Q8IUR7 673 aa16.05■□□□□ 0.16
DDX55-204ENST00000536079 OR2V1Q8NHB1 315 aa16.05■□□□□ 0.16
DDX55-204ENST00000536079 FNDC9Q8TBE3 224 aa16.05■□□□□ 0.16
DDX55-204ENST00000536079 REXO5Q96IC2 774 aaKnown RBP16.05■□□□□ 0.16
DDX55-204ENST00000536079 KLHL15Q96M94 604 aa16.05■□□□□ 0.16
DDX55-204ENST00000536079 OSGIN1Q9UJX0 560 aa16.05■□□□□ 0.16
DDX55-204ENST00000536079 ICE1Q9Y2F5 2266 aa16.05■□□□□ 0.16
DDX55-204ENST00000536079 TMEM72A0PK05 275 aa16.04■□□□□ 0.16
DDX55-204ENST00000536079 FAM90A27PA6NNH2 459 aa16.04■□□□□ 0.16
DDX55-204ENST00000536079 FAM220BPB1ANY3 271 aa16.04■□□□□ 0.16
DDX55-204ENST00000536079 TMEM229AB2RXF0 380 aa16.04■□□□□ 0.16
DDX55-204ENST00000536079 FAAHO00519 579 aa16.04■□□□□ 0.16
DDX55-204ENST00000536079 DCTN3O75935 186 aa16.04■□□□□ 0.16
DDX55-204ENST00000536079 AGAP20933 346 aa16.04■□□□□ 0.16
DDX55-204ENST00000536079 HTR2AP28223 471 aa16.04■□□□□ 0.16
DDX55-204ENST00000536079 TACR3P29371 465 aa16.04■□□□□ 0.16
DDX55-204ENST00000536079 CHRNB4P30926 498 aa16.04■□□□□ 0.16
DDX55-204ENST00000536079 SELENBP1Q13228 472 aa16.04■□□□□ 0.16
DDX55-204ENST00000536079 ART3Q13508 389 aa16.04■□□□□ 0.16
DDX55-204ENST00000536079 GKAP1Q5VSY0 366 aaPredicted RBP16.04■□□□□ 0.16
DDX55-204ENST00000536079 ESPNLQ6ZVH7 1005 aa16.04■□□□□ 0.16
DDX55-204ENST00000536079 KRT73Q86Y46 540 aa16.04■□□□□ 0.16
DDX55-204ENST00000536079 CADM2Q8N3J6 435 aa16.04■□□□□ 0.16
DDX55-204ENST00000536079 RELL2Q8NC24 303 aaPredicted RBP16.04■□□□□ 0.16
DDX55-204ENST00000536079 CCDC197Q8NCU1 140 aa16.04■□□□□ 0.16
DDX55-204ENST00000536079 OR4D11Q8NGI4 311 aa16.04■□□□□ 0.16
DDX55-204ENST00000536079 LILRB4Q8NHJ6 448 aa16.04■□□□□ 0.16
DDX55-204ENST00000536079 TMEM234Q8WY98 164 aa16.04■□□□□ 0.16
DDX55-204ENST00000536079 OSTF1Q92882 214 aa16.04■□□□□ 0.16
DDX55-204ENST00000536079 WNT2BQ93097 391 aa16.04■□□□□ 0.16
DDX55-204ENST00000536079 ZNF607Q96SK3 696 aa16.04■□□□□ 0.16
DDX55-204ENST00000536079 OR11A1Q9GZK7 315 aa16.04■□□□□ 0.16
DDX55-204ENST00000536079 ADAM19Q9H013 955 aa16.04■□□□□ 0.16
DDX55-204ENST00000536079 PLEKHB1Q9UF11 243 aaPredicted RBP16.04■□□□□ 0.16
DDX55-204ENST00000536079 PACSIN3Q9UKS6 424 aa16.04■□□□□ 0.16
DDX55-204ENST00000536079 TMED7-TICAM2A0A0A6YYA0 188 aa16.03■□□□□ 0.16
DDX55-204ENST00000536079 SLC22A20A6NK97 555 aa16.03■□□□□ 0.16
DDX55-204ENST00000536079 RCBTB2O95199 551 aa16.03■□□□□ 0.16
DDX55-204ENST00000536079 CLDN14O95500 239 aa16.03■□□□□ 0.16
DDX55-204ENST00000536079 ME2P23368 584 aa16.03■□□□□ 0.16
DDX55-204ENST00000536079 SLC1A3P43003 542 aa16.03■□□□□ 0.16
DDX55-204ENST00000536079 PSME3P61289 254 aa16.03■□□□□ 0.16
DDX55-204ENST00000536079 LIPEQ05469 1076 aa16.03■□□□□ 0.16
DDX55-204ENST00000536079 HBMQ6B0K9 141 aa16.03■□□□□ 0.16
DDX55-204ENST00000536079 CCDC80Q76M96 950 aa16.03■□□□□ 0.16
DDX55-204ENST00000536079 MAMDC2Q7Z304 686 aaPredicted RBP16.03■□□□□ 0.16
DDX55-204ENST00000536079 ZNF550Q7Z398 422 aa16.03■□□□□ 0.16
DDX55-204ENST00000536079 GRINAQ7Z429 371 aa16.03■□□□□ 0.16
DDX55-204ENST00000536079 RBM45Q8IUH3 476 aaKnown RBP16.03■□□□□ 0.16
DDX55-204ENST00000536079 ZNF440Q8IYI8 595 aa16.03■□□□□ 0.16
DDX55-204ENST00000536079 GCNT2Q8N0V5 402 aa16.03■□□□□ 0.16
DDX55-204ENST00000536079 ROBO4Q8WZ75 1007 aa16.03■□□□□ 0.16
DDX55-204ENST00000536079 INTS12Q96CB8 462 aaKnown RBP16.03■□□□□ 0.16
DDX55-204ENST00000536079 ARL5BQ96KC2 179 aa16.03■□□□□ 0.16
DDX55-204ENST00000536079 HOPXQ9BPY8 73 aaPredicted RBP16.03■□□□□ 0.16
DDX55-204ENST00000536079 SPATA5L1Q9BVQ7 753 aa16.03■□□□□ 0.16
DDX55-204ENST00000536079 CACYBPQ9HB71 228 aaKnown RBP16.03■□□□□ 0.16
DDX55-204ENST00000536079 COQ3Q9NZJ6 369 aa16.03■□□□□ 0.16
DDX55-204ENST00000536079 TAGLN3Q9UI15 199 aa16.03■□□□□ 0.16
DDX55-204ENST00000536079 TMED7Q9Y3B3 224 aa16.03■□□□□ 0.16
DDX55-204ENST00000536079 ARHGAP21Q5T5U3 1957 aa16.03■□□□□ 0.16
DDX55-204ENST00000536079 HECTD1Q9ULT8 2610 aa16.03■□□□□ 0.16
DDX55-204ENST00000536079 SPTAN1Q13813 2472 aaKnown RBP16.02■□□□□ 0.16
DDX55-204ENST00000536079 ZC3H12DA2A288 527 aaKnown RBP16.02■□□□□ 0.16
DDX55-204ENST00000536079 M0R3H8 397 aa16.02■□□□□ 0.16
DDX55-204ENST00000536079 SERPINB7O75635 380 aa16.02■□□□□ 0.16
DDX55-204ENST00000536079 IL2RAP01589 272 aa16.02■□□□□ 0.16
DDX55-204ENST00000536079 HTR1EP28566 365 aa16.02■□□□□ 0.16
DDX55-204ENST00000536079 APOBEC1P41238 236 aaKnown RBP16.02■□□□□ 0.16
DDX55-204ENST00000536079 KCNJ5P48544 419 aa16.02■□□□□ 0.16
DDX55-204ENST00000536079 GSK3BP49841 420 aa16.02■□□□□ 0.16
DDX55-204ENST00000536079 CARD18P57730 90 aa16.02■□□□□ 0.16
DDX55-204ENST00000536079 EEFSECP57772 596 aaKnown RBP16.02■□□□□ 0.16
DDX55-204ENST00000536079 SLC25A3Q00325 362 aa16.02■□□□□ 0.16
DDX55-204ENST00000536079 TFF3Q07654 80 aa16.02■□□□□ 0.16
DDX55-204ENST00000536079 BNIP2Q12982 314 aa16.02■□□□□ 0.16
DDX55-204ENST00000536079 SF3B4Q15427 424 aaKnown RBP eCLIP16.02■□□□□ 0.161e-13■■■■■ 68.7
DDX55-204ENST00000536079 NPTX1Q15818 432 aa16.02■□□□□ 0.16
DDX55-204ENST00000536079 SGCBQ16585 318 aa16.02■□□□□ 0.16
DDX55-204ENST00000536079 CHMP1BQ7LBR1 199 aa16.02■□□□□ 0.16
DDX55-204ENST00000536079 MICU2Q8IYU8 434 aa16.02■□□□□ 0.16
DDX55-204ENST00000536079 OR2T12Q8NG77 320 aa16.02■□□□□ 0.16
DDX55-204ENST00000536079 CA5BP1Q8WTZ4 195 aa16.02■□□□□ 0.16
DDX55-204ENST00000536079 ASB5Q8WWX0 329 aa16.02■□□□□ 0.16
DDX55-204ENST00000536079 ARHGDIGQ99819 225 aa16.02■□□□□ 0.16
DDX55-204ENST00000536079 ASH1LQ9NR48 2969 aaKnown RBP16.02■□□□□ 0.16
DDX55-204ENST00000536079 ABCD2Q9UBJ2 740 aa16.02■□□□□ 0.16
DDX55-204ENST00000536079 CHRNA9Q9UGM1 479 aa16.02■□□□□ 0.16
DDX55-204ENST00000536079 PTPN13Q12923 2485 aa16.02■□□□□ 0.15
DDX55-204ENST00000536079 IGHV3-15A0A0B4J1V0 119 aa16.01■□□□□ 0.15
DDX55-204ENST00000536079 HSPB2A8KAH6 182 aa16.01■□□□□ 0.15
DDX55-204ENST00000536079 LGI1O95970 557 aa16.01■□□□□ 0.15
DDX55-204ENST00000536079 TMIGD3P0DMS9 266 aaPredicted RBP16.01■□□□□ 0.15
DDX55-204ENST00000536079 T-ENOLP0DO92 83 aa16.01■□□□□ 0.15
DDX55-204ENST00000536079 BMP5P22003 454 aa16.01■□□□□ 0.15
DDX55-204ENST00000536079 CTSSP25774 331 aa16.01■□□□□ 0.15
DDX55-204ENST00000536079 POLR2HP52434 150 aaKnown RBP16.01■□□□□ 0.15
DDX55-204ENST00000536079 RPS3AP61247 264 aaKnown RBP16.01■□□□□ 0.15
DDX55-204ENST00000536079 KRT72Q14CN4 511 aa16.01■□□□□ 0.15
DDX55-204ENST00000536079 HSPB2Q16082 182 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms