RNA–Protein interactions for RNA: ENST00000535739.5

LTBR-205, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-205ENST00000535739 MKLN1Q9UL63 735 aa18.23■□□□□ 0.51
LTBR-205ENST00000535739 HEATR1Q9H583 2144 aaKnown RBP18.23■□□□□ 0.51
LTBR-205ENST00000535739 DNAJA2O60884 412 aa18.22■□□□□ 0.51
LTBR-205ENST00000535739 RAMP1O60894 148 aa18.22■□□□□ 0.51
LTBR-205ENST00000535739 STX11O75558 287 aa18.22■□□□□ 0.51
LTBR-205ENST00000535739 UGT2B17O75795 530 aa18.22■□□□□ 0.51
LTBR-205ENST00000535739 BPGMP07738 259 aa18.22■□□□□ 0.51
LTBR-205ENST00000535739 CLDN8P56748 225 aa18.22■□□□□ 0.51
LTBR-205ENST00000535739 C21orf58P58505 322 aa18.22■□□□□ 0.51
LTBR-205ENST00000535739 ARHGAP11BQ3KRB8 267 aa18.22■□□□□ 0.51
LTBR-205ENST00000535739 ANKRD42Q8N9B4 389 aa18.22■□□□□ 0.51
LTBR-205ENST00000535739 ST8SIA1Q92185 356 aa18.22■□□□□ 0.51
LTBR-205ENST00000535739 SLC35G5Q96KT7 338 aa18.22■□□□□ 0.51
LTBR-205ENST00000535739 PPP1R36Q96LQ0 422 aa18.22■□□□□ 0.51
LTBR-205ENST00000535739 TRIM2Q9C040 744 aa18.22■□□□□ 0.51
LTBR-205ENST00000535739 NKIRAS1Q9NYS0 192 aa18.22■□□□□ 0.51
LTBR-205ENST00000535739 RNF103-CHMP3A0A140T963 221 aa18.21■□□□□ 0.51
LTBR-205ENST00000535739 DUXAA6NLW8 204 aa18.21■□□□□ 0.51
LTBR-205ENST00000535739 ZNF724A8MTY0 619 aa18.21■□□□□ 0.51
LTBR-205ENST00000535739 AK1P00568 194 aa18.21■□□□□ 0.51
LTBR-205ENST00000535739 CSTAP01040 98 aa18.21■□□□□ 0.51
LTBR-205ENST00000535739 FESP07332 822 aa18.21■□□□□ 0.51
LTBR-205ENST00000535739 UBTFL6P0CB48 400 aaPredicted RBP18.21■□□□□ 0.51
LTBR-205ENST00000535739 IGHV1-2P23083 117 aa18.21■□□□□ 0.51
LTBR-205ENST00000535739 IDUAP35475 653 aa18.21■□□□□ 0.51
LTBR-205ENST00000535739 ACVR1BP36896 505 aa18.21■□□□□ 0.51
LTBR-205ENST00000535739 DIO1P49895 249 aa18.21■□□□□ 0.51
LTBR-205ENST00000535739 EMX2Q04743 252 aa18.21■□□□□ 0.51
LTBR-205ENST00000535739 MERTKQ12866 999 aa18.21■□□□□ 0.51
LTBR-205ENST00000535739 MAD2L1Q13257 205 aaPredicted RBP18.21■□□□□ 0.51
LTBR-205ENST00000535739 PPA1Q15181 289 aa18.21■□□□□ 0.51
LTBR-205ENST00000535739 ETFDHQ16134 617 aa18.21■□□□□ 0.51
LTBR-205ENST00000535739 REG4Q9BYZ8 158 aa18.21■□□□□ 0.51
LTBR-205ENST00000535739 ZNF350Q9GZX5 532 aa18.21■□□□□ 0.51
LTBR-205ENST00000535739 SLCO5A1Q9H2Y9 848 aa18.21■□□□□ 0.51
LTBR-205ENST00000535739 OR51I1Q9H343 314 aa18.21■□□□□ 0.51
LTBR-205ENST00000535739 SERINC1Q9NRX5 453 aa18.21■□□□□ 0.51
LTBR-205ENST00000535739 FAM53CQ9NYF3 392 aa18.21■□□□□ 0.51
LTBR-205ENST00000535739 NOP53Q9NZM5 478 aaKnown RBP18.21■□□□□ 0.51
LTBR-205ENST00000535739 NDUFS7O75251 213 aa18.2■□□□□ 0.5
LTBR-205ENST00000535739 CRLF1O75462 422 aa18.2■□□□□ 0.5
LTBR-205ENST00000535739 CD8AP01732 235 aa18.2■□□□□ 0.5
LTBR-205ENST00000535739 IGHV4-39P01824 125 aa18.2■□□□□ 0.5
LTBR-205ENST00000535739 ETV4P43268 484 aa18.2■□□□□ 0.5
LTBR-205ENST00000535739 MAPK14Q16539 360 aa18.2■□□□□ 0.5
LTBR-205ENST00000535739 DNAJC14Q6Y2X3 702 aaPredicted RBP18.2■□□□□ 0.5
LTBR-205ENST00000535739 TMPPEQ6ZT21 453 aa18.2■□□□□ 0.5
LTBR-205ENST00000535739 C16orf62Q7Z3J2 963 aa18.2■□□□□ 0.5
LTBR-205ENST00000535739 GALNT5Q7Z7M9 940 aa18.2■□□□□ 0.5
LTBR-205ENST00000535739 ZNF100Q8IYN0 542 aa18.2■□□□□ 0.5
LTBR-205ENST00000535739 OR4A15Q8NGL6 344 aa18.2■□□□□ 0.5
LTBR-205ENST00000535739 TMEM234Q8WY98 164 aa18.2■□□□□ 0.5
LTBR-205ENST00000535739 ASIC5Q9NY37 505 aa18.2■□□□□ 0.5
LTBR-205ENST00000535739 CISD1Q9NZ45 108 aaKnown RBP18.2■□□□□ 0.5
LTBR-205ENST00000535739 NPAP1Q9NZP6 1156 aa18.2■□□□□ 0.5
LTBR-205ENST00000535739 MXRA5Q9NR99 2828 aa18.19■□□□□ 0.5
LTBR-205ENST00000535739 SHISA9B4DS77 424 aa18.19■□□□□ 0.5
LTBR-205ENST00000535739 SULT2B1O00204 365 aa18.19■□□□□ 0.5
LTBR-205ENST00000535739 RNASET2O00584 256 aaKnown RBP18.19■□□□□ 0.5
LTBR-205ENST00000535739 ITM2AO43736 263 aa18.19■□□□□ 0.5
LTBR-205ENST00000535739 BCAS1O75363 584 aaPredicted RBP18.19■□□□□ 0.5
LTBR-205ENST00000535739 PGCP20142 388 aa18.19■□□□□ 0.5
LTBR-205ENST00000535739 COX5AP20674 150 aa18.19■□□□□ 0.5
LTBR-205ENST00000535739 DMTNQ08495 405 aa18.19■□□□□ 0.5
LTBR-205ENST00000535739 PDCD2Q16342 344 aaPredicted RBP18.19■□□□□ 0.5
LTBR-205ENST00000535739 SYT14P1Q58G82 188 aa18.19■□□□□ 0.5
LTBR-205ENST00000535739 HHATQ5VTY9 493 aa18.19■□□□□ 0.5
LTBR-205ENST00000535739 EIF3MQ7L2H7 374 aaKnown RBP18.19■□□□□ 0.5
LTBR-205ENST00000535739 ARFGAP2Q8N6H7 521 aa18.19■□□□□ 0.5
LTBR-205ENST00000535739 MGARPQ8TDB4 240 aa18.19■□□□□ 0.5
LTBR-205ENST00000535739 MUCL1Q96DR8 90 aa18.19■□□□□ 0.5
LTBR-205ENST00000535739 DNAJA3Q96EY1 480 aa18.19■□□□□ 0.5
LTBR-205ENST00000535739 TRAF4Q9BUZ4 470 aaPredicted RBP18.19■□□□□ 0.5
LTBR-205ENST00000535739 ACER3Q9NUN7 267 aa18.19■□□□□ 0.5
LTBR-205ENST00000535739 EXD2Q9NVH0 621 aa18.19■□□□□ 0.5
LTBR-205ENST00000535739 GDF2Q9UK05 429 aaPredicted RBP18.19■□□□□ 0.5
LTBR-205ENST00000535739 IGHV3-9P01782 118 aa18.18■□□□□ 0.5
LTBR-205ENST00000535739 THBS1P07996 1170 aa18.18■□□□□ 0.5
LTBR-205ENST00000535739 DHRS4L1P0CG22 281 aa18.18■□□□□ 0.5
LTBR-205ENST00000535739 OR12D1P0DN82 309 aa18.18■□□□□ 0.5
LTBR-205ENST00000535739 TFPIP10646 304 aa18.18■□□□□ 0.5
LTBR-205ENST00000535739 GGT1P19440 569 aa18.18■□□□□ 0.5
LTBR-205ENST00000535739 PTNP21246 168 aa18.18■□□□□ 0.5
LTBR-205ENST00000535739 PGM1P36871 562 aa18.18■□□□□ 0.5
LTBR-205ENST00000535739 CDH11P55287 796 aa18.18■□□□□ 0.5
LTBR-205ENST00000535739 WDR4P57081 412 aaKnown RBP18.18■□□□□ 0.5
LTBR-205ENST00000535739 CSNK2A1P68400 391 aaPredicted RBP18.18■□□□□ 0.5
LTBR-205ENST00000535739 TIMM23BQ5SRD1 257 aa18.18■□□□□ 0.5
LTBR-205ENST00000535739 ABLIM2Q6H8Q1 611 aa18.18■□□□□ 0.5
LTBR-205ENST00000535739 HEPHL1Q6MZM0 1159 aa18.18■□□□□ 0.5
LTBR-205ENST00000535739 TNFAIP8L2Q6P589 184 aaPredicted RBP18.18■□□□□ 0.5
LTBR-205ENST00000535739 HMGN2P46Q86SG4 172 aa18.18■□□□□ 0.5
LTBR-205ENST00000535739 MTDHQ86UE4 582 aaKnown RBP18.18■□□□□ 0.5
LTBR-205ENST00000535739 ANKRD46Q86W74 232 aa18.18■□□□□ 0.5
LTBR-205ENST00000535739 NUDCD3Q8IVD9 361 aa18.18■□□□□ 0.5
LTBR-205ENST00000535739 ZNF433Q8N7K0 673 aaPredicted RBP18.18■□□□□ 0.5
LTBR-205ENST00000535739 MIPOL1Q8TD10 442 aa18.18■□□□□ 0.5
LTBR-205ENST00000535739 XAGE5Q8WWM1 108 aa18.18■□□□□ 0.5
LTBR-205ENST00000535739 RAB8BQ92930 207 aa18.18■□□□□ 0.5
LTBR-205ENST00000535739 PAIP2Q9BPZ3 127 aaKnown RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms