RNA–Protein interactions for RNA: ENST00000535297.1

TMEM258-203, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-203ENST00000535297 GP6Q9HCN6 339 aa12.34□□□□□ -0.43
TMEM258-203ENST00000535297 A4GALTQ9NPC4 353 aa12.34□□□□□ -0.43
TMEM258-203ENST00000535297 PRDM4Q9UKN5 801 aa12.34□□□□□ -0.43
TMEM258-203ENST00000535297 CLEC4AQ9UMR7 237 aa12.34□□□□□ -0.43
TMEM258-203ENST00000535297 MPDZO75970 2070 aa12.34□□□□□ -0.43
TMEM258-203ENST00000535297 TACC2O95359 2948 aa12.34□□□□□ -0.43
TMEM258-203ENST00000535297 TRBV5-3A0A0A0MS03 114 aa12.33□□□□□ -0.44
TMEM258-203ENST00000535297 A0A0G2JND7 137 aa12.33□□□□□ -0.44
TMEM258-203ENST00000535297 A0A0G2JPF8 293 aa12.33□□□□□ -0.44
TMEM258-203ENST00000535297 A0A1W2PP18 115 aa12.33□□□□□ -0.44
TMEM258-203ENST00000535297 SH3D21A4FU49 640 aa12.33□□□□□ -0.44
TMEM258-203ENST00000535297 HNRNPCL2B2RXH8 293 aa12.33□□□□□ -0.44
TMEM258-203ENST00000535297 HNRNPCL3B7ZW38 293 aa12.33□□□□□ -0.44
TMEM258-203ENST00000535297 HNRNPCL1O60812 293 aaKnown RBP12.33□□□□□ -0.44
TMEM258-203ENST00000535297 ADAM11O75078 769 aa12.33□□□□□ -0.44
TMEM258-203ENST00000535297 THBS1P07996 1170 aa12.33□□□□□ -0.44
TMEM258-203ENST00000535297 HNRNPCL4P0DMR1 293 aa12.33□□□□□ -0.44
TMEM258-203ENST00000535297 TROVE2P10155 538 aaKnown RBP eCLIP12.33□□□□□ -0.44
TMEM258-203ENST00000535297 POU2F1P14859 743 aa12.33□□□□□ -0.44
TMEM258-203ENST00000535297 NCF2P19878 526 aaPredicted RBP12.33□□□□□ -0.44
TMEM258-203ENST00000535297 FKBP2P26885 142 aaKnown RBP12.33□□□□□ -0.44
TMEM258-203ENST00000535297 AGTR1P30556 359 aa12.33□□□□□ -0.44
TMEM258-203ENST00000535297 HTR3AP46098 478 aa12.33□□□□□ -0.44
TMEM258-203ENST00000535297 LARS2Q15031 903 aaKnown RBP12.33□□□□□ -0.44
TMEM258-203ENST00000535297 HSP90B2PQ58FF3 399 aa12.33□□□□□ -0.44
TMEM258-203ENST00000535297 SYT14P1Q58G82 188 aa12.33□□□□□ -0.44
TMEM258-203ENST00000535297 PAGE3Q5JUK9 113 aa12.33□□□□□ -0.44
TMEM258-203ENST00000535297 RNF220Q5VTB9 566 aa12.33□□□□□ -0.44
TMEM258-203ENST00000535297 ZNF836Q6ZNA1 936 aa12.33□□□□□ -0.44
TMEM258-203ENST00000535297 FCRLAQ7L513 359 aa12.33□□□□□ -0.44
TMEM258-203ENST00000535297 MSRB3Q8IXL7 192 aa12.33□□□□□ -0.44
TMEM258-203ENST00000535297 SLC43A2Q8N370 569 aa12.33□□□□□ -0.44
TMEM258-203ENST00000535297 OR52P1PQ8NH57 321 aa12.33□□□□□ -0.44
TMEM258-203ENST00000535297 BBS10Q8TAM1 723 aa12.33□□□□□ -0.44
TMEM258-203ENST00000535297 LINC01560Q8TB33 94 aa12.33□□□□□ -0.44
TMEM258-203ENST00000535297 ROBO4Q8WZ75 1007 aa12.33□□□□□ -0.44
TMEM258-203ENST00000535297 OR5B2Q96R09 309 aa12.33□□□□□ -0.44
TMEM258-203ENST00000535297 GPATCH1Q9BRR8 931 aaKnown RBP12.33□□□□□ -0.44
TMEM258-203ENST00000535297 TACO1Q9BSH4 297 aaKnown RBP12.33□□□□□ -0.44
TMEM258-203ENST00000535297 BCL2L10Q9HD36 194 aa12.33□□□□□ -0.44
TMEM258-203ENST00000535297 CTPS2Q9NRF8 586 aa12.33□□□□□ -0.44
TMEM258-203ENST00000535297 PLSCR4Q9NRQ2 329 aa12.33□□□□□ -0.44
TMEM258-203ENST00000535297 RASSF1Q9NS23 344 aa12.33□□□□□ -0.44
TMEM258-203ENST00000535297 CHRNA9Q9UGM1 479 aa12.33□□□□□ -0.44
TMEM258-203ENST00000535297 NDRG3Q9UGV2 375 aa12.33□□□□□ -0.44
TMEM258-203ENST00000535297 CORO2BQ9UQ03 480 aa12.33□□□□□ -0.44
TMEM258-203ENST00000535297 ZNF443Q9Y2A4 671 aaPredicted RBP12.33□□□□□ -0.44
TMEM258-203ENST00000535297 TESMINQ9Y4I5 508 aa12.33□□□□□ -0.44
TMEM258-203ENST00000535297 A0A1W2PNR3 127 aa12.32□□□□□ -0.44
TMEM258-203ENST00000535297 CDHR4A6H8M9 788 aa12.32□□□□□ -0.44
TMEM258-203ENST00000535297 CFAP73A6NFT4 308 aa12.32□□□□□ -0.44
TMEM258-203ENST00000535297 AP3D1O14617 1153 aa12.32□□□□□ -0.44
TMEM258-203ENST00000535297 NUDT7P0C024 238 aa12.32□□□□□ -0.44
TMEM258-203ENST00000535297 CCKARP32238 428 aa12.32□□□□□ -0.44
TMEM258-203ENST00000535297 KCNJ5P48544 419 aa12.32□□□□□ -0.44
TMEM258-203ENST00000535297 IDH2P48735 452 aaKnown RBP12.32□□□□□ -0.44
TMEM258-203ENST00000535297 CLK1P49759 484 aaKnown RBP12.32□□□□□ -0.44
TMEM258-203ENST00000535297 CSNK2A1P68400 391 aaPredicted RBP12.32□□□□□ -0.44
TMEM258-203ENST00000535297 FAM27E3Q08E93 113 aa12.32□□□□□ -0.44
TMEM258-203ENST00000535297 EPS8Q12929 822 aa12.32□□□□□ -0.44
TMEM258-203ENST00000535297 RPS26P11Q5JNZ5 115 aaPredicted RBP12.32□□□□□ -0.44
TMEM258-203ENST00000535297 GCNT6Q5T4J0 391 aa12.32□□□□□ -0.44
TMEM258-203ENST00000535297 METTL21CQ5VZV1 264 aa12.32□□□□□ -0.44
TMEM258-203ENST00000535297 VRK2Q86Y07 508 aa12.32□□□□□ -0.44
TMEM258-203ENST00000535297 ZNF610Q8N9Z0 462 aa12.32□□□□□ -0.44
TMEM258-203ENST00000535297 TSPEARQ8WU66 669 aa12.32□□□□□ -0.44
TMEM258-203ENST00000535297 ABHD3Q8WU67 409 aa12.32□□□□□ -0.44
TMEM258-203ENST00000535297 POLDIP3Q9BY77 421 aaKnown RBP12.32□□□□□ -0.44
TMEM258-203ENST00000535297 CLEC4MQ9H2X3 399 aaPredicted RBP12.32□□□□□ -0.44
TMEM258-203ENST00000535297 ARMC7Q9H6L4 198 aa12.32□□□□□ -0.44
TMEM258-203ENST00000535297 FANCFQ9NPI8 374 aa12.32□□□□□ -0.44
TMEM258-203ENST00000535297 MED4Q9NPJ6 270 aa12.32□□□□□ -0.44
TMEM258-203ENST00000535297 MRGBPQ9NV56 204 aa12.32□□□□□ -0.44
TMEM258-203ENST00000535297 VAPAQ9P0L0 249 aa12.32□□□□□ -0.44
TMEM258-203ENST00000535297 SLAMF8Q9P0V8 285 aa12.32□□□□□ -0.44
TMEM258-203ENST00000535297 KLHL13Q9P2N7 655 aa12.32□□□□□ -0.44
TMEM258-203ENST00000535297 LEF1Q9UJU2 399 aaPredicted RBP12.32□□□□□ -0.44
TMEM258-203ENST00000535297 IFT52Q9Y366 437 aa12.32□□□□□ -0.44
TMEM258-203ENST00000535297 ABCA4P78363 2273 aa12.32□□□□□ -0.44
TMEM258-203ENST00000535297 C5orf58C9J3I9 102 aa12.31□□□□□ -0.44
TMEM258-203ENST00000535297 DNPH1O43598 174 aa12.31□□□□□ -0.44
TMEM258-203ENST00000535297 PRKD3O94806 890 aa12.31□□□□□ -0.44
TMEM258-203ENST00000535297 ARAFP10398 606 aa12.31□□□□□ -0.44
TMEM258-203ENST00000535297 ENPP1P22413 925 aa12.31□□□□□ -0.44
TMEM258-203ENST00000535297 UGT2B10P36537 528 aa12.31□□□□□ -0.44
TMEM258-203ENST00000535297 SLC1A3P43003 542 aa12.31□□□□□ -0.44
TMEM258-203ENST00000535297 DIO1P49895 249 aa12.31□□□□□ -0.44
TMEM258-203ENST00000535297 POLR2HP52434 150 aaKnown RBP12.31□□□□□ -0.44
TMEM258-203ENST00000535297 MAP2K6P52564 334 aa12.31□□□□□ -0.44
TMEM258-203ENST00000535297 TMEM201Q5SNT2 666 aa12.31□□□□□ -0.44
TMEM258-203ENST00000535297 TMPPEQ6ZT21 453 aa12.31□□□□□ -0.44
TMEM258-203ENST00000535297 STK32CQ86UX6 486 aa12.31□□□□□ -0.44
TMEM258-203ENST00000535297 DPP10Q8N608 796 aa12.31□□□□□ -0.44
TMEM258-203ENST00000535297 SPATA9Q9BWV2 254 aa12.31□□□□□ -0.44
TMEM258-203ENST00000535297 TMEM120AQ9BXJ8 343 aa12.31□□□□□ -0.44
TMEM258-203ENST00000535297 BCO1Q9HAY6 547 aa12.31□□□□□ -0.44
TMEM258-203ENST00000535297 KLHL9Q9P2J3 617 aa12.31□□□□□ -0.44
TMEM258-203ENST00000535297 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.31□□□□□ -0.44
TMEM258-203ENST00000535297 ZNF232Q9UNY5 417 aa12.31□□□□□ -0.44
TMEM258-203ENST00000535297 NDUFAF1Q9Y375 327 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms