RNA–Protein interactions for RNA: ENST00000534663.1

RAG1-203, Transcript of recombination activating 1, humanhuman

TSL 1 (best)

Gene RAG1, Length 3,707 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAG1-203ENST00000534663 YIPF5Q969M3 257 aa6.34□□□□□ -1.39
RAG1-203ENST00000534663 LRIG1Q96JA1 1093 aa6.34□□□□□ -1.39
RAG1-203ENST00000534663 HSPA12BQ96MM6 686 aa6.34□□□□□ -1.39
RAG1-203ENST00000534663 SFXN2Q96NB2 322 aa6.34□□□□□ -1.39
RAG1-203ENST00000534663 MTHFD2LQ9H903 347 aaPredicted RBP6.34□□□□□ -1.39
RAG1-203ENST00000534663 BCL2L10Q9HD36 194 aa6.34□□□□□ -1.39
RAG1-203ENST00000534663 APOBEC3BQ9UH17 382 aaKnown RBP6.34□□□□□ -1.39
RAG1-203ENST00000534663 ADAM18Q9Y3Q7 739 aa6.34□□□□□ -1.39
RAG1-203ENST00000534663 SPAG17Q6Q759 2223 aa6.34□□□□□ -1.39
RAG1-203ENST00000534663 LOC100509620A0A075B734 347 aa6.34□□□□□ -1.4
RAG1-203ENST00000534663 TBC1D3DA0A087WVF3 549 aa6.34□□□□□ -1.4
RAG1-203ENST00000534663 TBC1D3IA0A087WXS9 549 aa6.34□□□□□ -1.4
RAG1-203ENST00000534663 TBC1D3EA0A087X179 549 aa6.34□□□□□ -1.4
RAG1-203ENST00000534663 TBC1D3KA0A087X1G2 549 aa6.34□□□□□ -1.4
RAG1-203ENST00000534663 TBC1D3FA6NER0 549 aaPredicted RBP6.34□□□□□ -1.4
RAG1-203ENST00000534663 TBC1D3LB9A6J9 549 aa6.34□□□□□ -1.4
RAG1-203ENST00000534663 ARL6IP5O75915 188 aa6.34□□□□□ -1.4
RAG1-203ENST00000534663 SPDEFO95238 335 aa6.34□□□□□ -1.4
RAG1-203ENST00000534663 MPC2O95563 127 aa6.34□□□□□ -1.4
RAG1-203ENST00000534663 IFNGP01579 166 aa6.34□□□□□ -1.4
RAG1-203ENST00000534663 THY1P04216 161 aa6.34□□□□□ -1.4
RAG1-203ENST00000534663 ZGLP1P0C6A0 271 aa6.34□□□□□ -1.4
RAG1-203ENST00000534663 SLC35G6P0C7Q6 338 aa6.34□□□□□ -1.4
RAG1-203ENST00000534663 TBC1D3HP0C7X1 549 aa6.34□□□□□ -1.4
RAG1-203ENST00000534663 NAT1P18440 290 aa6.34□□□□□ -1.4
RAG1-203ENST00000534663 DDX6P26196 483 aaKnown RBP eCLIP6.34□□□□□ -1.4
RAG1-203ENST00000534663 CMPK1P30085 196 aa6.34□□□□□ -1.4
RAG1-203ENST00000534663 RAD52P43351 418 aa6.34□□□□□ -1.4
RAG1-203ENST00000534663 OPCMLQ14982 345 aa6.34□□□□□ -1.4
RAG1-203ENST00000534663 ATXN7L3Q14CW9 347 aaPredicted RBP6.34□□□□□ -1.4
RAG1-203ENST00000534663 ARHGEF6Q15052 776 aa6.34□□□□□ -1.4
RAG1-203ENST00000534663 AANATQ16613 207 aa6.34□□□□□ -1.4
RAG1-203ENST00000534663 HNRNPA1L2Q32P51 320 aaKnown RBP6.34□□□□□ -1.4
RAG1-203ENST00000534663 RNLSQ5VYX0 342 aa6.34□□□□□ -1.4
RAG1-203ENST00000534663 METRNLQ641Q3 311 aa6.34□□□□□ -1.4
RAG1-203ENST00000534663 TBC1D3GQ6DHY5 549 aa6.34□□□□□ -1.4
RAG1-203ENST00000534663 TBC1D3CQ6IPX1 549 aa6.34□□□□□ -1.4
RAG1-203ENST00000534663 CNKSR3Q6P9H4 555 aa6.34□□□□□ -1.4
RAG1-203ENST00000534663 IDO2Q6ZQW0 420 aa6.34□□□□□ -1.4
RAG1-203ENST00000534663 Q6ZTK2 550 aa6.34□□□□□ -1.4
RAG1-203ENST00000534663 PARGQ86W56 976 aa6.34□□□□□ -1.4
RAG1-203ENST00000534663 NRROSQ86YC3 692 aa6.34□□□□□ -1.4
RAG1-203ENST00000534663 RASGRP3Q8IV61 690 aa6.34□□□□□ -1.4
RAG1-203ENST00000534663 GPALPP1Q8IXQ4 340 aa6.34□□□□□ -1.4
RAG1-203ENST00000534663 TBC1D3Q8IZP1 549 aaPredicted RBP6.34□□□□□ -1.4
RAG1-203ENST00000534663 IL17RCQ8NAC3 791 aa6.34□□□□□ -1.4
RAG1-203ENST00000534663 OR4K14Q8NGD5 310 aa6.34□□□□□ -1.4
RAG1-203ENST00000534663 OR2T4Q8NH00 348 aa6.34□□□□□ -1.4
RAG1-203ENST00000534663 ADAMTS14Q8WXS8 1223 aa6.34□□□□□ -1.4
RAG1-203ENST00000534663 LRRC3BQ96PB8 259 aa6.34□□□□□ -1.4
RAG1-203ENST00000534663 ZNF436Q9C0F3 470 aaPredicted RBP6.34□□□□□ -1.4
RAG1-203ENST00000534663 GHITMQ9H3K2 345 aa6.34□□□□□ -1.4
RAG1-203ENST00000534663 EPHX3Q9H6B9 360 aa6.34□□□□□ -1.4
RAG1-203ENST00000534663 EMC7Q9NPA0 242 aa6.34□□□□□ -1.4
RAG1-203ENST00000534663 STARD5Q9NSY2 213 aa6.34□□□□□ -1.4
RAG1-203ENST00000534663 SCML1Q9UN30 329 aa6.34□□□□□ -1.4
RAG1-203ENST00000534663 COPS3Q9UNS2 423 aa6.34□□□□□ -1.4
RAG1-203ENST00000534663 IER3IP1Q9Y5U9 82 aa6.34□□□□□ -1.4
RAG1-203ENST00000534663 IGKV1-8A0A0C4DH67 115 aa6.33□□□□□ -1.4
RAG1-203ENST00000534663 EDDM13A0A1B0GTR0 161 aa6.33□□□□□ -1.4
RAG1-203ENST00000534663 ATP6V1G2-DDX39BF2Z307 99 aa6.33□□□□□ -1.4
RAG1-203ENST00000534663 OR10H2O60403 315 aa6.33□□□□□ -1.4
RAG1-203ENST00000534663 DNAJB6O75190 326 aa6.33□□□□□ -1.4
RAG1-203ENST00000534663 PEX14O75381 377 aa6.33□□□□□ -1.4
RAG1-203ENST00000534663 UBL3O95164 117 aa6.33□□□□□ -1.4
RAG1-203ENST00000534663 TPOP07202 933 aa6.33□□□□□ -1.4
RAG1-203ENST00000534663 FAM157BP0CG42 384 aa6.33□□□□□ -1.4
RAG1-203ENST00000534663 F3P13726 295 aa6.33□□□□□ -1.4
RAG1-203ENST00000534663 AKR1D1P51857 326 aa6.33□□□□□ -1.4
RAG1-203ENST00000534663 DEFA5Q01523 94 aa6.33□□□□□ -1.4
RAG1-203ENST00000534663 FGL2Q14314 439 aa6.33□□□□□ -1.4
RAG1-203ENST00000534663 GSG1Q2KHT4 349 aa6.33□□□□□ -1.4
RAG1-203ENST00000534663 COL28A1Q2UY09 1125 aa6.33□□□□□ -1.4
RAG1-203ENST00000534663 CDONQ4KMG0 1287 aa6.33□□□□□ -1.4
RAG1-203ENST00000534663 SFRP5Q5T4F7 317 aa6.33□□□□□ -1.4
RAG1-203ENST00000534663 GARNL3Q5VVW2 1013 aa6.33□□□□□ -1.4
RAG1-203ENST00000534663 CD276Q5ZPR3 534 aa6.33□□□□□ -1.4
RAG1-203ENST00000534663 WDR88Q6ZMY6 472 aa6.33□□□□□ -1.4
RAG1-203ENST00000534663 CFAP77Q6ZQR2 320 aa6.33□□□□□ -1.4
RAG1-203ENST00000534663 TTLQ8NG68 377 aa6.33□□□□□ -1.4
RAG1-203ENST00000534663 GSX2Q9BZM3 304 aa6.33□□□□□ -1.4
RAG1-203ENST00000534663 AICDAQ9GZX7 198 aa6.33□□□□□ -1.4
RAG1-203ENST00000534663 NOX3Q9HBY0 568 aa6.33□□□□□ -1.4
RAG1-203ENST00000534663 ISYNA1Q9NPH2 558 aa6.33□□□□□ -1.4
RAG1-203ENST00000534663 NOX4Q9NPH5 578 aa6.33□□□□□ -1.4
RAG1-203ENST00000534663 PRDM9Q9NQV7 894 aa6.33□□□□□ -1.4
RAG1-203ENST00000534663 DLL4Q9NR61 685 aa6.33□□□□□ -1.4
RAG1-203ENST00000534663 PHPT1Q9NRX4 125 aaPredicted RBP6.33□□□□□ -1.4
RAG1-203ENST00000534663 POT1Q9NUX5 634 aa6.33□□□□□ -1.4
RAG1-203ENST00000534663 CLDND1Q9NY35 253 aa6.33□□□□□ -1.4
RAG1-203ENST00000534663 MYEF2Q9P2K5 600 aaKnown RBP6.33□□□□□ -1.4
RAG1-203ENST00000534663 ZNF346Q9UL40 294 aaKnown RBP6.33□□□□□ -1.4
RAG1-203ENST00000534663 A0A1W2PPV9 198 aa6.33□□□□□ -1.4
RAG1-203ENST00000534663 IMPA2O14732 288 aa6.33□□□□□ -1.4
RAG1-203ENST00000534663 SPINT1O43278 529 aa6.33□□□□□ -1.4
RAG1-203ENST00000534663 ZIC2O95409 532 aaPredicted RBP6.33□□□□□ -1.4
RAG1-203ENST00000534663 HLA-DQB1P01920 261 aa6.33□□□□□ -1.4
RAG1-203ENST00000534663 POU3F2P20265 443 aaPredicted RBP6.33□□□□□ -1.4
RAG1-203ENST00000534663 NUP62P37198 522 aaPredicted RBP6.33□□□□□ -1.4
RAG1-203ENST00000534663 MAP2K6P52564 334 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms