RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-223ENST00000534442 ZNF672Q499Z4 452 aaPredicted RBP3.8□□□□□ -1.8
ECHDC1-223ENST00000534442 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.8□□□□□ -1.8
ECHDC1-223ENST00000534442 GPRC6AQ5T6X5 926 aa3.8□□□□□ -1.8
ECHDC1-223ENST00000534442 MLIPQ5VWP3 458 aa3.8□□□□□ -1.8
ECHDC1-223ENST00000534442 CNSTQ6PJW8 725 aa3.8□□□□□ -1.8
ECHDC1-223ENST00000534442 PRSS35Q8N3Z0 413 aa3.8□□□□□ -1.8
ECHDC1-223ENST00000534442 SIDT2Q8NBJ9 832 aaKnown RBP3.8□□□□□ -1.8
ECHDC1-223ENST00000534442 OR2A12Q8NGT7 310 aa3.8□□□□□ -1.8
ECHDC1-223ENST00000534442 SLC2A14Q8TDB8 520 aa3.8□□□□□ -1.8
ECHDC1-223ENST00000534442 METTL21AQ8WXB1 218 aa3.8□□□□□ -1.8
ECHDC1-223ENST00000534442 RAB7BQ96AH8 199 aa3.8□□□□□ -1.8
ECHDC1-223ENST00000534442 ART5Q96L15 291 aa3.8□□□□□ -1.8
ECHDC1-223ENST00000534442 PRICKLE1Q96MT3 831 aaPredicted RBP3.8□□□□□ -1.8
ECHDC1-223ENST00000534442 TBC1D10AQ9BXI6 508 aa3.8□□□□□ -1.8
ECHDC1-223ENST00000534442 EGLN3Q9H6Z9 239 aa3.8□□□□□ -1.8
ECHDC1-223ENST00000534442 RNF121Q9H920 327 aa3.8□□□□□ -1.8
ECHDC1-223ENST00000534442 MAGEF1Q9HAY2 307 aa3.8□□□□□ -1.8
ECHDC1-223ENST00000534442 ESM1Q9NQ30 184 aa3.8□□□□□ -1.8
ECHDC1-223ENST00000534442 PDRG1Q9NUG6 133 aa3.8□□□□□ -1.8
ECHDC1-223ENST00000534442 DDX19AQ9NUU7 478 aaKnown RBP3.8□□□□□ -1.8
ECHDC1-223ENST00000534442 IL36AQ9UHA7 158 aa3.8□□□□□ -1.8
ECHDC1-223ENST00000534442 KCNK6Q9Y257 313 aa3.8□□□□□ -1.8
ECHDC1-223ENST00000534442 NSG2Q9Y328 171 aa3.8□□□□□ -1.8
ECHDC1-223ENST00000534442 STYXL1Q9Y6J8 313 aa3.8□□□□□ -1.8
ECHDC1-223ENST00000534442 FSIP2Q5CZC0 6907 aa3.79□□□□□ -1.8
ECHDC1-223ENST00000534442 CCDC88CQ9P219 2028 aa3.79□□□□□ -1.8
ECHDC1-223ENST00000534442 FLG2Q5D862 2391 aaPredicted RBP3.79□□□□□ -1.8
ECHDC1-223ENST00000534442 GOLGA6L7A0A1B0GV03 622 aa3.79□□□□□ -1.8
ECHDC1-223ENST00000534442 MAGEB16A2A368 324 aa3.79□□□□□ -1.8
ECHDC1-223ENST00000534442 DEFB108AA8MXU0 73 aa3.79□□□□□ -1.8
ECHDC1-223ENST00000534442 ANKRD63C9JTQ0 380 aa3.79□□□□□ -1.8
ECHDC1-223ENST00000534442 FGF17O60258 216 aa3.79□□□□□ -1.8
ECHDC1-223ENST00000534442 CDC40O60508 579 aaKnown RBP eCLIP3.79□□□□□ -1.81e-6■□□□□ 9.9
ECHDC1-223ENST00000534442 TNNC2P02585 160 aa3.79□□□□□ -1.8
ECHDC1-223ENST00000534442 UMODP07911 640 aa3.79□□□□□ -1.8
ECHDC1-223ENST00000534442 UQCRHP07919 91 aa3.79□□□□□ -1.8
ECHDC1-223ENST00000534442 YES1P07947 543 aa3.79□□□□□ -1.8
ECHDC1-223ENST00000534442 SLC35E2P0CK97 266 aa3.79□□□□□ -1.8
ECHDC1-223ENST00000534442 ERVK-10P10266 1014 aa3.79□□□□□ -1.8
ECHDC1-223ENST00000534442 KRT3P12035 628 aa3.79□□□□□ -1.8
ECHDC1-223ENST00000534442 ZNF24P17028 368 aa3.79□□□□□ -1.8
ECHDC1-223ENST00000534442 DPP4P27487 766 aa3.79□□□□□ -1.8
ECHDC1-223ENST00000534442 SRD5A2P31213 254 aa3.79□□□□□ -1.8
ECHDC1-223ENST00000534442 CCT6AP40227 531 aaKnown RBP3.79□□□□□ -1.8
ECHDC1-223ENST00000534442 DNA2P51530 1060 aa3.79□□□□□ -1.8
ECHDC1-223ENST00000534442 MTTPP55157 894 aa3.79□□□□□ -1.8
ECHDC1-223ENST00000534442 CLDN17P56750 224 aa3.79□□□□□ -1.8
ECHDC1-223ENST00000534442 YWHAGP61981 247 aaKnown RBP eCLIP3.79□□□□□ -1.8
ECHDC1-223ENST00000534442 RPS4XP62701 263 aaKnown RBP3.79□□□□□ -1.8
ECHDC1-223ENST00000534442 UBA52P62987 128 aaKnown RBP3.79□□□□□ -1.8
ECHDC1-223ENST00000534442 CDR2Q01850 454 aa3.79□□□□□ -1.8
ECHDC1-223ENST00000534442 SLC34A1Q06495 639 aa3.79□□□□□ -1.8
ECHDC1-223ENST00000534442 ZRSR1Q15695 479 aaKnown RBP3.79□□□□□ -1.8
ECHDC1-223ENST00000534442 ZNF718Q3SXZ3 478 aa3.79□□□□□ -1.8
ECHDC1-223ENST00000534442 FAM76BQ5HYJ3 339 aa3.79□□□□□ -1.8
ECHDC1-223ENST00000534442 ASPHD2Q6ICH7 369 aa3.79□□□□□ -1.8
ECHDC1-223ENST00000534442 CERS6Q6ZMG9 384 aa3.79□□□□□ -1.8
ECHDC1-223ENST00000534442 CLEC20AQ6ZU45 233 aa3.79□□□□□ -1.8
ECHDC1-223ENST00000534442 COX8CQ7Z4L0 72 aa3.79□□□□□ -1.8
ECHDC1-223ENST00000534442 LAX1Q8IWV1 398 aa3.79□□□□□ -1.8
ECHDC1-223ENST00000534442 GBP7Q8N8V2 638 aaPredicted RBP3.79□□□□□ -1.8
ECHDC1-223ENST00000534442 SMYD1Q8NB12 490 aa3.79□□□□□ -1.8
ECHDC1-223ENST00000534442 SLC37A3Q8NCC5 494 aa3.79□□□□□ -1.8
ECHDC1-223ENST00000534442 OR2Y1Q8NGV0 311 aa3.79□□□□□ -1.8
ECHDC1-223ENST00000534442 RFT1Q96AA3 541 aa3.79□□□□□ -1.8
ECHDC1-223ENST00000534442 ZNF524Q96C55 264 aa3.79□□□□□ -1.8
ECHDC1-223ENST00000534442 ANKRD36BP1Q96IX9 119 aa3.79□□□□□ -1.8
ECHDC1-223ENST00000534442 ZNF514Q96K75 400 aaPredicted RBP3.79□□□□□ -1.8
ECHDC1-223ENST00000534442 C10orf90Q96M02 699 aa3.79□□□□□ -1.8
ECHDC1-223ENST00000534442 TCEANC2Q96MN5 208 aa3.79□□□□□ -1.8
ECHDC1-223ENST00000534442 FAM213AQ9BRX8 229 aa3.79□□□□□ -1.8
ECHDC1-223ENST00000534442 HES7Q9BYE0 225 aa3.79□□□□□ -1.8
ECHDC1-223ENST00000534442 KRTAP4-2Q9BYR5 136 aa3.79□□□□□ -1.8
ECHDC1-223ENST00000534442 ATP13A3Q9H7F0 1226 aa3.79□□□□□ -1.8
ECHDC1-223ENST00000534442 ANO10Q9NW15 660 aa3.79□□□□□ -1.8
ECHDC1-223ENST00000534442 RBAKQ9NYW8 714 aaPredicted RBP3.79□□□□□ -1.8
ECHDC1-223ENST00000534442 MTRF1LQ9UGC7 380 aaKnown RBP3.79□□□□□ -1.8
ECHDC1-223ENST00000534442 IL19Q9UHD0 177 aa3.79□□□□□ -1.8
ECHDC1-223ENST00000534442 MAN1B1Q9UKM7 699 aa3.79□□□□□ -1.8
ECHDC1-223ENST00000534442 GRID1Q9ULK0 1009 aa3.79□□□□□ -1.8
ECHDC1-223ENST00000534442 PPP2R2CQ9Y2T4 447 aa3.79□□□□□ -1.8
ECHDC1-223ENST00000534442 TDRKHQ9Y2W6 561 aaKnown RBP3.79□□□□□ -1.8
ECHDC1-223ENST00000534442 TMED7Q9Y3B3 224 aa3.79□□□□□ -1.8
ECHDC1-223ENST00000534442 FAM215AQ9Y5M1 114 aa3.79□□□□□ -1.8
ECHDC1-223ENST00000534442 ALPK2Q86TB3 2170 aa3.79□□□□□ -1.8
ECHDC1-223ENST00000534442 MYCBP2O75592 4640 aa3.79□□□□□ -1.8
ECHDC1-223ENST00000534442 CPAMD8Q8IZJ3 1885 aa3.78□□□□□ -1.8
ECHDC1-223ENST00000534442 MSGN1A6NI15 193 aa3.78□□□□□ -1.8
ECHDC1-223ENST00000534442 SMIM1B2RUZ4 78 aa3.78□□□□□ -1.8
ECHDC1-223ENST00000534442 E9PMD0 336 aa3.78□□□□□ -1.8
ECHDC1-223ENST00000534442 BMPR1BO00238 502 aa3.78□□□□□ -1.8
ECHDC1-223ENST00000534442 KIF5CO60282 957 aa3.78□□□□□ -1.8
ECHDC1-223ENST00000534442 SEC22BO75396 215 aa3.78□□□□□ -1.8
ECHDC1-223ENST00000534442 KRT36O76013 467 aa3.78□□□□□ -1.8
ECHDC1-223ENST00000534442 PCCBP05166 539 aa3.78□□□□□ -1.8
ECHDC1-223ENST00000534442 ABHD2P08910 425 aa3.78□□□□□ -1.8
ECHDC1-223ENST00000534442 CCDC130P13994 396 aa3.78□□□□□ -1.8
ECHDC1-223ENST00000534442 MDKP21741 143 aaPredicted RBP3.78□□□□□ -1.8
ECHDC1-223ENST00000534442 TIMP3P35625 211 aa3.78□□□□□ -1.8
ECHDC1-223ENST00000534442 CLK1P49759 484 aaKnown RBP3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms