RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 REP15Q6BDI9 236 aa18.32■□□□□ 0.52
CCS-208ENST00000533244 SPATA21Q7Z572 469 aa18.32■□□□□ 0.52
CCS-208ENST00000533244 SNX32Q86XE0 403 aa18.32■□□□□ 0.52
CCS-208ENST00000533244 SLC25A43Q8WUT9 341 aaPredicted RBP18.32■□□□□ 0.52
CCS-208ENST00000533244 RNASE6Q93091 150 aaKnown RBP18.32■□□□□ 0.52
CCS-208ENST00000533244 SLC35B4Q969S0 331 aa18.32■□□□□ 0.52
CCS-208ENST00000533244 CPNE4Q96A23 557 aaPredicted RBP18.32■□□□□ 0.52
CCS-208ENST00000533244 SRXN1Q9BYN0 137 aa18.32■□□□□ 0.52
CCS-208ENST00000533244 CTPS2Q9NRF8 586 aa18.32■□□□□ 0.52
CCS-208ENST00000533244 SERINC1Q9NRX5 453 aa18.32■□□□□ 0.52
CCS-208ENST00000533244 FOXD3Q9UJU5 478 aaPredicted RBP18.32■□□□□ 0.52
CCS-208ENST00000533244 MCTS1Q9ULC4 181 aaKnown RBP18.32■□□□□ 0.52
CCS-208ENST00000533244 NOTCH2Q04721 2471 aa18.31■□□□□ 0.52
CCS-208ENST00000533244 ANKHD1Q8IWZ3 2542 aaKnown RBP18.31■□□□□ 0.52
CCS-208ENST00000533244 NPPAP01160 153 aa18.31■□□□□ 0.52
CCS-208ENST00000533244 PRF1P14222 555 aa18.31■□□□□ 0.52
CCS-208ENST00000533244 RBBP4Q09028 425 aa18.31■□□□□ 0.52
CCS-208ENST00000533244 CAPRIN1Q14444 709 aaKnown RBP18.31■□□□□ 0.52
CCS-208ENST00000533244 ZNF311Q5JNZ3 666 aa18.31■□□□□ 0.52
CCS-208ENST00000533244 ADGRG3Q86Y34 549 aa18.31■□□□□ 0.52
CCS-208ENST00000533244 RNF128Q8TEB7 428 aa18.31■□□□□ 0.52
CCS-208ENST00000533244 STARD4Q96DR4 205 aa18.31■□□□□ 0.52
CCS-208ENST00000533244 CACYBPQ9HB71 228 aaKnown RBP18.31■□□□□ 0.52
CCS-208ENST00000533244 ARMCX1Q9P291 453 aa18.31■□□□□ 0.52
CCS-208ENST00000533244 PACSIN3Q9UKS6 424 aa18.31■□□□□ 0.52
CCS-208ENST00000533244 FBN2P35556 2912 aa18.3■□□□□ 0.52
CCS-208ENST00000533244 DCHS2Q6V1P9 2916 aa18.3■□□□□ 0.52
CCS-208ENST00000533244 EEF1E1-BLOC1S5C9J1V9 151 aa18.3■□□□□ 0.52
CCS-208ENST00000533244 MRASO14807 208 aa18.3■□□□□ 0.52
CCS-208ENST00000533244 EEF1E1O43324 174 aaKnown RBP18.3■□□□□ 0.52
CCS-208ENST00000533244 SYNGR4O95473 234 aa18.3■□□□□ 0.52
CCS-208ENST00000533244 GKN3PP0CG01 181 aa18.3■□□□□ 0.52
CCS-208ENST00000533244 DRD4P21917 467 aa18.3■□□□□ 0.52
CCS-208ENST00000533244 SLC6A2P23975 617 aa18.3■□□□□ 0.52
CCS-208ENST00000533244 PRKAR1BP31321 381 aa18.3■□□□□ 0.52
CCS-208ENST00000533244 SLC1A3P43003 542 aa18.3■□□□□ 0.52
CCS-208ENST00000533244 HTR3AP46098 478 aa18.3■□□□□ 0.52
CCS-208ENST00000533244 GZMMP51124 257 aa18.3■□□□□ 0.52
CCS-208ENST00000533244 GYS2P54840 703 aa18.3■□□□□ 0.52
CCS-208ENST00000533244 PCBP3P57721 371 aaKnown RBP18.3■□□□□ 0.52
CCS-208ENST00000533244 SYT14P1Q58G82 188 aa18.3■□□□□ 0.52
CCS-208ENST00000533244 NANOGP8Q6NSW7 305 aa18.3■□□□□ 0.52
CCS-208ENST00000533244 VWA1Q6PCB0 445 aa18.3■□□□□ 0.52
CCS-208ENST00000533244 DHRS4L2Q6PKH6 230 aa18.3■□□□□ 0.52
CCS-208ENST00000533244 ZNF550Q7Z398 422 aa18.3■□□□□ 0.52
CCS-208ENST00000533244 SERPINA11Q86U17 422 aa18.3■□□□□ 0.52
CCS-208ENST00000533244 ZNF295-AS1Q8N0V1 137 aa18.3■□□□□ 0.52
CCS-208ENST00000533244 C11orf65Q8NCR3 313 aa18.3■□□□□ 0.52
CCS-208ENST00000533244 HIPK4Q8NE63 616 aa18.3■□□□□ 0.52
CCS-208ENST00000533244 ATP6V1C2Q8NEY4 427 aa18.3■□□□□ 0.52
CCS-208ENST00000533244 LRRC58Q96CX6 371 aa18.3■□□□□ 0.52
CCS-208ENST00000533244 ELAC2Q9BQ52 826 aaKnown RBP18.3■□□□□ 0.52
CCS-208ENST00000533244 SLC39A3Q9BRY0 314 aa18.3■□□□□ 0.52
CCS-208ENST00000533244 ADAM19Q9H013 955 aa18.3■□□□□ 0.52
CCS-208ENST00000533244 ARMC7Q9H6L4 198 aa18.3■□□□□ 0.52
CCS-208ENST00000533244 NANOGQ9H9S0 305 aa18.3■□□□□ 0.52
CCS-208ENST00000533244 TIGARQ9NQ88 270 aa18.3■□□□□ 0.52
CCS-208ENST00000533244 CHRNA9Q9UGM1 479 aa18.3■□□□□ 0.52
CCS-208ENST00000533244 ABCA12Q86UK0 2595 aa18.3■□□□□ 0.52
CCS-208ENST00000533244 CACNA1DQ01668 2161 aa18.29■□□□□ 0.52
CCS-208ENST00000533244 LOC100653049A0A140TA62 436 aa18.29■□□□□ 0.52
CCS-208ENST00000533244 A0A1W2PNR3 127 aa18.29■□□□□ 0.52
CCS-208ENST00000533244 A8MXE2 369 aa18.29■□□□□ 0.52
CCS-208ENST00000533244 CCDC22O60826 627 aa18.29■□□□□ 0.52
CCS-208ENST00000533244 SS18L1O75177 396 aaPredicted RBP18.29■□□□□ 0.52
CCS-208ENST00000533244 KRT34O76011 436 aa18.29■□□□□ 0.52
CCS-208ENST00000533244 CGAP01215 116 aa18.29■□□□□ 0.52
CCS-208ENST00000533244 UQCRBP14927 111 aa18.29■□□□□ 0.52
CCS-208ENST00000533244 FKBP2P26885 142 aaKnown RBP18.29■□□□□ 0.52
CCS-208ENST00000533244 SLC7A1P30825 629 aa18.29■□□□□ 0.52
CCS-208ENST00000533244 RAC3P60763 192 aa18.29■□□□□ 0.52
CCS-208ENST00000533244 CYLC2Q14093 348 aaPredicted RBP18.29■□□□□ 0.52
CCS-208ENST00000533244 FAM214BQ7L5A3 538 aa18.29■□□□□ 0.52
CCS-208ENST00000533244 KRT73Q86Y46 540 aa18.29■□□□□ 0.52
CCS-208ENST00000533244 MCEMP1Q8IX19 187 aa18.29■□□□□ 0.52
CCS-208ENST00000533244 ZZZ3Q8IYH5 903 aa18.29■□□□□ 0.52
CCS-208ENST00000533244 OR8J3Q8NGG0 315 aa18.29■□□□□ 0.52
CCS-208ENST00000533244 LRRC46Q96FV0 321 aa18.29■□□□□ 0.52
CCS-208ENST00000533244 GMPPAQ96IJ6 420 aaPredicted RBP18.29■□□□□ 0.52
CCS-208ENST00000533244 PRRG4Q9BZD6 226 aa18.29■□□□□ 0.52
CCS-208ENST00000533244 GLRX2Q9NS18 164 aa18.29■□□□□ 0.52
CCS-208ENST00000533244 OSGIN1Q9UJX0 560 aa18.29■□□□□ 0.52
CCS-208ENST00000533244 SPIN1Q9Y657 262 aaPredicted RBP18.29■□□□□ 0.52
CCS-208ENST00000533244 APCP25054 2843 aa18.28■□□□□ 0.52
CCS-208ENST00000533244 GMNCA6NCL1 334 aa18.28■□□□□ 0.52
CCS-208ENST00000533244 MSTNO14793 375 aa18.28■□□□□ 0.52
CCS-208ENST00000533244 SNX3O60493 162 aa18.28■□□□□ 0.52
CCS-208ENST00000533244 CD8BP10966 210 aa18.28■□□□□ 0.52
CCS-208ENST00000533244 PRG2P13727 222 aa18.28■□□□□ 0.52
CCS-208ENST00000533244 CLK1P49759 484 aaKnown RBP18.28■□□□□ 0.52
CCS-208ENST00000533244 POLR2HP52434 150 aaKnown RBP18.28■□□□□ 0.52
CCS-208ENST00000533244 CYP51A1Q16850 503 aa18.28■□□□□ 0.52
CCS-208ENST00000533244 MMEL1Q495T6 779 aa18.28■□□□□ 0.52
CCS-208ENST00000533244 BTLAQ7Z6A9 289 aa18.28■□□□□ 0.52
CCS-208ENST00000533244 COMTD1Q86VU5 262 aa18.28■□□□□ 0.52
CCS-208ENST00000533244 CNEP1R1Q8N9A8 125 aa18.28■□□□□ 0.52
CCS-208ENST00000533244 RP9Q8TA86 221 aaKnown RBP18.28■□□□□ 0.52
CCS-208ENST00000533244 C14orf79Q96F83 325 aa18.28■□□□□ 0.52
CCS-208ENST00000533244 SPATA5L1Q9BVQ7 753 aa18.28■□□□□ 0.52
CCS-208ENST00000533244 NSRP1Q9H0G5 558 aaKnown RBP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms