RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 SLC38A4Q969I6 547 aa7.53□□□□□ -1.2
NEDD8-207ENST00000533242 IL4I1Q96RQ9 567 aa7.53□□□□□ -1.2
NEDD8-207ENST00000533242 NEURL2Q9BR09 285 aa7.53□□□□□ -1.2
NEDD8-207ENST00000533242 CENPOQ9BU64 300 aa7.53□□□□□ -1.2
NEDD8-207ENST00000533242 UCK2Q9BZX2 261 aa7.53□□□□□ -1.2
NEDD8-207ENST00000533242 ROGDIQ9GZN7 287 aa7.53□□□□□ -1.2
NEDD8-207ENST00000533242 DCSTAMPQ9H295 470 aa7.53□□□□□ -1.2
NEDD8-207ENST00000533242 PALMDQ9NP74 551 aa7.53□□□□□ -1.2
NEDD8-207ENST00000533242 QPCTLQ9NXS2 382 aa7.53□□□□□ -1.2
NEDD8-207ENST00000533242 ANGPT4Q9Y264 503 aa7.53□□□□□ -1.2
NEDD8-207ENST00000533242 HRH3Q9Y5N1 445 aa7.53□□□□□ -1.2
NEDD8-207ENST00000533242 DSPPQ9NZW4 1301 aa7.52□□□□□ -1.2
NEDD8-207ENST00000533242 CLDN24A6NM45 220 aa7.52□□□□□ -1.2
NEDD8-207ENST00000533242 M0R3H8 397 aa7.52□□□□□ -1.2
NEDD8-207ENST00000533242 TFECO14948 347 aaPredicted RBP7.52□□□□□ -1.2
NEDD8-207ENST00000533242 PGRMC2O15173 223 aa7.52□□□□□ -1.2
NEDD8-207ENST00000533242 AIREO43918 545 aa7.52□□□□□ -1.2
NEDD8-207ENST00000533242 TPST2O60704 377 aa7.52□□□□□ -1.2
NEDD8-207ENST00000533242 IFNW1P05000 195 aa7.52□□□□□ -1.2
NEDD8-207ENST00000533242 OR12D1P0DN82 309 aa7.52□□□□□ -1.2
NEDD8-207ENST00000533242 RHCEP18577 417 aa7.52□□□□□ -1.2
NEDD8-207ENST00000533242 RPL3P39023 403 aaKnown RBP7.52□□□□□ -1.2
NEDD8-207ENST00000533242 CYB561P49447 251 aa7.52□□□□□ -1.2
NEDD8-207ENST00000533242 BCAP31P51572 246 aa7.52□□□□□ -1.2
NEDD8-207ENST00000533242 CCR8P51685 355 aa7.52□□□□□ -1.2
NEDD8-207ENST00000533242 MLF1P58340 268 aa7.52□□□□□ -1.2
NEDD8-207ENST00000533242 RPS15AP62244 130 aaKnown RBP7.52□□□□□ -1.2
NEDD8-207ENST00000533242 FUT5Q11128 374 aa7.52□□□□□ -1.2
NEDD8-207ENST00000533242 HYAL2Q12891 473 aa7.52□□□□□ -1.2
NEDD8-207ENST00000533242 MYBPHQ13203 477 aa7.52□□□□□ -1.2
NEDD8-207ENST00000533242 PIN1Q13526 163 aaPredicted RBP7.52□□□□□ -1.2
NEDD8-207ENST00000533242 IRF3Q14653 427 aa7.52□□□□□ -1.2
NEDD8-207ENST00000533242 ZNF846Q147U1 533 aa7.52□□□□□ -1.2
NEDD8-207ENST00000533242 OXA1LQ15070 435 aa7.52□□□□□ -1.2
NEDD8-207ENST00000533242 ZNF468Q5VIY5 522 aaPredicted RBP7.52□□□□□ -1.2
NEDD8-207ENST00000533242 PRSS41Q7RTY9 318 aa7.52□□□□□ -1.2
NEDD8-207ENST00000533242 SLC46A3Q7Z3Q1 461 aa7.52□□□□□ -1.2
NEDD8-207ENST00000533242 SZRD1Q7Z422 152 aa7.52□□□□□ -1.2
NEDD8-207ENST00000533242 VN1R4Q7Z5H5 301 aa7.52□□□□□ -1.2
NEDD8-207ENST00000533242 ADCK1Q86TW2 530 aa7.52□□□□□ -1.2
NEDD8-207ENST00000533242 ZNF227Q86WZ6 799 aa7.52□□□□□ -1.2
NEDD8-207ENST00000533242 OR5P2Q8WZ92 322 aa7.52□□□□□ -1.2
NEDD8-207ENST00000533242 UBE2E3Q969T4 207 aa7.52□□□□□ -1.2
NEDD8-207ENST00000533242 ZHX1-C8orf76Q96EF9 292 aa7.52□□□□□ -1.2
NEDD8-207ENST00000533242 OR1F2PQ96R84 312 aa7.52□□□□□ -1.2
NEDD8-207ENST00000533242 AIF1LQ9BQI0 150 aa7.52□□□□□ -1.2
NEDD8-207ENST00000533242 YIPF4Q9BSR8 244 aa7.52□□□□□ -1.2
NEDD8-207ENST00000533242 QRSL1Q9H0R6 528 aaKnown RBP7.52□□□□□ -1.2
NEDD8-207ENST00000533242 GLIPR2Q9H4G4 154 aa7.52□□□□□ -1.2
NEDD8-207ENST00000533242 ANKHQ9HCJ1 492 aa7.52□□□□□ -1.2
NEDD8-207ENST00000533242 A4GALTQ9NPC4 353 aa7.52□□□□□ -1.2
NEDD8-207ENST00000533242 DLL4Q9NR61 685 aa7.52□□□□□ -1.2
NEDD8-207ENST00000533242 CTPS2Q9NRF8 586 aa7.52□□□□□ -1.2
NEDD8-207ENST00000533242 DNAJB12Q9NXW2 375 aaKnown RBP7.52□□□□□ -1.2
NEDD8-207ENST00000533242 INTS1Q8N201 2190 aaKnown RBP7.52□□□□□ -1.21
NEDD8-207ENST00000533242 CSMD2Q7Z408 3487 aa7.52□□□□□ -1.21
NEDD8-207ENST00000533242 PRRC2AP48634 2157 aaKnown RBP7.52□□□□□ -1.21
NEDD8-207ENST00000533242 A0A0A6YYD5 115 aa7.52□□□□□ -1.21
NEDD8-207ENST00000533242 LOC100506127A0A0U1RQW1 187 aa7.52□□□□□ -1.21
NEDD8-207ENST00000533242 KLRC4-KLRK1H3BQV0 150 aa7.52□□□□□ -1.21
NEDD8-207ENST00000533242 SGK494L7N484 410 aa7.52□□□□□ -1.21
NEDD8-207ENST00000533242 SEMA3DO95025 777 aa7.52□□□□□ -1.21
NEDD8-207ENST00000533242 TP53P04637 393 aaPredicted RBP7.52□□□□□ -1.21
NEDD8-207ENST00000533242 HSMCR30P0CW71 290 aa7.52□□□□□ -1.21
NEDD8-207ENST00000533242 NSDHLQ15738 373 aa7.52□□□□□ -1.21
NEDD8-207ENST00000533242 DGUOKQ16854 277 aa7.52□□□□□ -1.21
NEDD8-207ENST00000533242 NDUFAF5Q5TEU4 345 aa7.52□□□□□ -1.21
NEDD8-207ENST00000533242 DEF8Q6ZN54 512 aa7.52□□□□□ -1.21
NEDD8-207ENST00000533242 CLIP4Q8N3C7 705 aa7.52□□□□□ -1.21
NEDD8-207ENST00000533242 C16orf52Q8NHV5 167 aa7.52□□□□□ -1.21
NEDD8-207ENST00000533242 SLC7A13Q8TCU3 470 aa7.52□□□□□ -1.21
NEDD8-207ENST00000533242 NRGNQ92686 78 aa7.52□□□□□ -1.21
NEDD8-207ENST00000533242 Q96MT0 163 aa7.52□□□□□ -1.21
NEDD8-207ENST00000533242 COL21A1Q96P44 957 aa7.52□□□□□ -1.21
NEDD8-207ENST00000533242 GPA33Q99795 319 aa7.52□□□□□ -1.21
NEDD8-207ENST00000533242 BCL7BQ9BQE9 202 aa7.52□□□□□ -1.21
NEDD8-207ENST00000533242 PRR14Q9BWN1 585 aa7.52□□□□□ -1.21
NEDD8-207ENST00000533242 MROQ9BYG7 248 aa7.52□□□□□ -1.21
NEDD8-207ENST00000533242 DSN1Q9H410 356 aa7.52□□□□□ -1.21
NEDD8-207ENST00000533242 PELI2Q9HAT8 420 aa7.52□□□□□ -1.21
NEDD8-207ENST00000533242 HMG20AQ9NP66 347 aa7.52□□□□□ -1.21
NEDD8-207ENST00000533242 PLSCR2Q9NRY7 297 aa7.52□□□□□ -1.21
NEDD8-207ENST00000533242 LANCL2Q9NS86 450 aa7.52□□□□□ -1.21
NEDD8-207ENST00000533242 DAPK2Q9UIK4 370 aa7.52□□□□□ -1.21
NEDD8-207ENST00000533242 KCNE3Q9Y6H6 103 aa7.52□□□□□ -1.21
NEDD8-207ENST00000533242 LRIT2A6NDA9 550 aa7.51□□□□□ -1.21
NEDD8-207ENST00000533242 OR2W5A6NFC9 320 aa7.51□□□□□ -1.21
NEDD8-207ENST00000533242 TMEM200CA6NKL6 621 aa7.51□□□□□ -1.21
NEDD8-207ENST00000533242 MRPS14O60783 128 aaKnown RBP7.51□□□□□ -1.21
NEDD8-207ENST00000533242 ENTPD6O75354 484 aa7.51□□□□□ -1.21
NEDD8-207ENST00000533242 DBTP11182 482 aaKnown RBP7.51□□□□□ -1.21
NEDD8-207ENST00000533242 ITGA2P17301 1181 aa7.51□□□□□ -1.21
NEDD8-207ENST00000533242 CCT3P49368 545 aaKnown RBP7.51□□□□□ -1.21
NEDD8-207ENST00000533242 CRISP1P54107 249 aa7.51□□□□□ -1.21
NEDD8-207ENST00000533242 RPS3AP61247 264 aaKnown RBP7.51□□□□□ -1.21
NEDD8-207ENST00000533242 HEPACAMQ14CZ8 416 aa7.51□□□□□ -1.21
NEDD8-207ENST00000533242 SPDYE7PQ495Y7 208 aa7.51□□□□□ -1.21
NEDD8-207ENST00000533242 ARMCX4Q5H9R4 360 aa7.51□□□□□ -1.21
NEDD8-207ENST00000533242 SULF2Q8IWU5 870 aa7.51□□□□□ -1.21
NEDD8-207ENST00000533242 ARMC10Q8N2F6 343 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms