RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 RGS16O15492 202 aaPredicted RBP2.26□□□□□ -2.05
CD44-234ENST00000531873 OR10H3O60404 316 aa2.26□□□□□ -2.05
CD44-234ENST00000531873 ZNF254O75437 659 aa2.26□□□□□ -2.05
CD44-234ENST00000531873 UPK3AO75631 287 aa2.26□□□□□ -2.05
CD44-234ENST00000531873 UGT2B17O75795 530 aa2.26□□□□□ -2.05
CD44-234ENST00000531873 CABYRO75952 493 aa2.26□□□□□ -2.05
CD44-234ENST00000531873 CLDN9O95484 217 aa2.26□□□□□ -2.05
CD44-234ENST00000531873 TBX6O95947 436 aaPredicted RBP2.26□□□□□ -2.05
CD44-234ENST00000531873 SLC2A3P11169 496 aa2.26□□□□□ -2.05
CD44-234ENST00000531873 SFTPCP11686 197 aa2.26□□□□□ -2.05
CD44-234ENST00000531873 MX1P20591 662 aa2.26□□□□□ -2.05
CD44-234ENST00000531873 FASP25445 335 aa2.26□□□□□ -2.05
CD44-234ENST00000531873 HMGB2P26583 209 aaKnown RBP2.26□□□□□ -2.05
CD44-234ENST00000531873 ADORA2BP29275 332 aa2.26□□□□□ -2.05
CD44-234ENST00000531873 SHC1P29353 583 aa2.26□□□□□ -2.05
CD44-234ENST00000531873 NMT1P30419 496 aaKnown RBP2.26□□□□□ -2.05
CD44-234ENST00000531873 FGF9P31371 208 aaPredicted RBP2.26□□□□□ -2.05
CD44-234ENST00000531873 PTGDSP41222 190 aa2.26□□□□□ -2.05
CD44-234ENST00000531873 MAGEA9P43362 315 aa2.26□□□□□ -2.05
CD44-234ENST00000531873 RPL29P47914 159 aaKnown RBP2.26□□□□□ -2.05
CD44-234ENST00000531873 TDO2P48775 406 aa2.26□□□□□ -2.05
CD44-234ENST00000531873 FNTAP49354 379 aa2.26□□□□□ -2.05
CD44-234ENST00000531873 DAP3P51398 398 aaKnown RBP2.26□□□□□ -2.05
CD44-234ENST00000531873 TPMTP51580 245 aa2.26□□□□□ -2.05
CD44-234ENST00000531873 EFNA3P52797 238 aa2.26□□□□□ -2.05
CD44-234ENST00000531873 CRYBB1P53674 252 aaPredicted RBP2.26□□□□□ -2.05
CD44-234ENST00000531873 CDH4P55283 916 aa2.26□□□□□ -2.05
CD44-234ENST00000531873 RIPK4P57078 832 aa2.26□□□□□ -2.05
CD44-234ENST00000531873 CDK16Q00536 496 aa2.26□□□□□ -2.05
CD44-234ENST00000531873 GK3PQ14409 553 aa2.26□□□□□ -2.05
CD44-234ENST00000531873 ISXQ2M1V0 245 aa2.26□□□□□ -2.05
CD44-234ENST00000531873 TRIM16LQ309B1 348 aa2.26□□□□□ -2.05
CD44-234ENST00000531873 EIPR1Q53HC9 387 aa2.26□□□□□ -2.05
CD44-234ENST00000531873 PAN3Q58A45 887 aaKnown RBP2.26□□□□□ -2.05
CD44-234ENST00000531873 C6orf226Q5I0X4 101 aa2.26□□□□□ -2.05
CD44-234ENST00000531873 GPRC6AQ5T6X5 926 aa2.26□□□□□ -2.05
CD44-234ENST00000531873 PRAMEF5Q5TYX0 476 aa2.26□□□□□ -2.05
CD44-234ENST00000531873 PRAMEF6Q5VXH4 476 aa2.26□□□□□ -2.05
CD44-234ENST00000531873 CGB2Q6NT52 195 aa2.26□□□□□ -2.05
CD44-234ENST00000531873 H2BFWTQ7Z2G1 175 aa2.26□□□□□ -2.05
CD44-234ENST00000531873 C17orf82Q86X59 251 aaPredicted RBP2.26□□□□□ -2.05
CD44-234ENST00000531873 ECHDC2Q86YB7 292 aa2.26□□□□□ -2.05
CD44-234ENST00000531873 EGFL6Q8IUX8 553 aa2.26□□□□□ -2.05
CD44-234ENST00000531873 UBE2J2Q8N2K1 259 aa2.26□□□□□ -2.05
CD44-234ENST00000531873 SVOPLQ8N434 492 aa2.26□□□□□ -2.05
CD44-234ENST00000531873 ATP6V0D2Q8N8Y2 350 aa2.26□□□□□ -2.05
CD44-234ENST00000531873 FAM83FQ8NEG4 500 aaPredicted RBP2.26□□□□□ -2.05
CD44-234ENST00000531873 TRPV1Q8NER1 839 aa2.26□□□□□ -2.05
CD44-234ENST00000531873 OR9K2Q8NGE7 335 aa2.26□□□□□ -2.05
CD44-234ENST00000531873 OR56B4Q8NH76 319 aa2.26□□□□□ -2.05
CD44-234ENST00000531873 CCDC26Q8TAB7 109 aa2.26□□□□□ -2.05
CD44-234ENST00000531873 RAB3IL1Q8TBN0 382 aa2.26□□□□□ -2.05
CD44-234ENST00000531873 MAGEE2Q8TD90 523 aaPredicted RBP2.26□□□□□ -2.05
CD44-234ENST00000531873 ST8SIA1Q92185 356 aa2.26□□□□□ -2.05
CD44-234ENST00000531873 RASD2Q96D21 266 aa2.26□□□□□ -2.05
CD44-234ENST00000531873 HAVCR1Q96D42 359 aa2.26□□□□□ -2.05
CD44-234ENST00000531873 VSIG2Q96IQ7 327 aa2.26□□□□□ -2.05
CD44-234ENST00000531873 RBM14Q96PK6 669 aaKnown RBP2.26□□□□□ -2.05
CD44-234ENST00000531873 CCT8L2Q96SF2 557 aa2.26□□□□□ -2.05
CD44-234ENST00000531873 APOL2Q9BQE5 337 aa2.26□□□□□ -2.05
CD44-234ENST00000531873 CHIAQ9BZP6 476 aa2.26□□□□□ -2.05
CD44-234ENST00000531873 NAT10Q9H0A0 1025 aaKnown RBP2.26□□□□□ -2.05
CD44-234ENST00000531873 ZNF385DQ9H6B1 395 aa2.26□□□□□ -2.05
CD44-234ENST00000531873 VPS37BQ9H9H4 285 aa2.26□□□□□ -2.05
CD44-234ENST00000531873 CUTCQ9NTM9 273 aa2.26□□□□□ -2.05
CD44-234ENST00000531873 NUDT15Q9NV35 164 aa2.26□□□□□ -2.05
CD44-234ENST00000531873 KANK1Q14678 1352 aa2.25□□□□□ -2.05
CD44-234ENST00000531873 RPAP1Q9BWH6 1393 aaPredicted RBP2.25□□□□□ -2.05
CD44-234ENST00000531873 ANKRD30BQ9BXX2 1392 aa2.25□□□□□ -2.05
CD44-234ENST00000531873 A0A1B0GUS0 222 aa2.25□□□□□ -2.05
CD44-234ENST00000531873 SGK1O00141 431 aa2.25□□□□□ -2.05
CD44-234ENST00000531873 HAS3O00219 553 aa2.25□□□□□ -2.05
CD44-234ENST00000531873 KLHL41O60662 606 aa2.25□□□□□ -2.05
CD44-234ENST00000531873 CRLF1O75462 422 aa2.25□□□□□ -2.05
CD44-234ENST00000531873 ATP5LO75964 103 aa2.25□□□□□ -2.05
CD44-234ENST00000531873 AP2A1O95782 977 aa2.25□□□□□ -2.05
CD44-234ENST00000531873 LGALS2P05162 132 aa2.25□□□□□ -2.05
CD44-234ENST00000531873 STSP08842 583 aa2.25□□□□□ -2.05
CD44-234ENST00000531873 GIG44P09565 113 aaPredicted RBP2.25□□□□□ -2.05
CD44-234ENST00000531873 HSMCR30P0CW71 290 aa2.25□□□□□ -2.05
CD44-234ENST00000531873 TOP1P11387 765 aaKnown RBP2.25□□□□□ -2.05
CD44-234ENST00000531873 ATP1B2P14415 290 aaPredicted RBP2.25□□□□□ -2.05
CD44-234ENST00000531873 PGAM2P15259 253 aa2.25□□□□□ -2.05
CD44-234ENST00000531873 IGLL1P15814 213 aa2.25□□□□□ -2.05
CD44-234ENST00000531873 NPR2P20594 1047 aa2.25□□□□□ -2.05
CD44-234ENST00000531873 CCR1P32246 355 aa2.25□□□□□ -2.05
CD44-234ENST00000531873 SLC8A3P57103 927 aa2.25□□□□□ -2.05
CD44-234ENST00000531873 RPL32P62910 135 aaKnown RBP2.25□□□□□ -2.05
CD44-234ENST00000531873 ENPEPQ07075 957 aa2.25□□□□□ -2.05
CD44-234ENST00000531873 SRSF5Q13243 272 aaKnown RBP2.25□□□□□ -2.05
CD44-234ENST00000531873 SERTAD2Q14140 314 aa2.25□□□□□ -2.05
CD44-234ENST00000531873 DPYSL2Q16555 572 aa2.25□□□□□ -2.05
CD44-234ENST00000531873 TIMM50Q3ZCQ8 353 aa2.25□□□□□ -2.05
CD44-234ENST00000531873 SBK1Q52WX2 424 aa2.25□□□□□ -2.05
CD44-234ENST00000531873 HSP90AB3PQ58FF7 597 aa2.25□□□□□ -2.05
CD44-234ENST00000531873 DMRTC1Q5HYR2 192 aa2.25□□□□□ -2.05
CD44-234ENST00000531873 TCTEX1D4Q5JR98 221 aa2.25□□□□□ -2.05
CD44-234ENST00000531873 OR2G6Q5TZ20 316 aa2.25□□□□□ -2.05
CD44-234ENST00000531873 SLC22A10Q63ZE4 541 aa2.25□□□□□ -2.05
CD44-234ENST00000531873 METAP1DQ6UB28 335 aaPredicted RBP2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms