RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 NMUR2Q9GZQ4 415 aa16.25■□□□□ 0.19
SSSCA1-206ENST00000531405 ZDHHC2Q9UIJ5 367 aa16.25■□□□□ 0.19
SSSCA1-206ENST00000531405 MKLN1Q9UL63 735 aa16.25■□□□□ 0.19
SSSCA1-206ENST00000531405 A0A1W2PR80 420 aa16.24■□□□□ 0.19
SSSCA1-206ENST00000531405 TLDC2A0PJX2 215 aa16.24■□□□□ 0.19
SSSCA1-206ENST00000531405 OR5H1A6NKK0 313 aa16.24■□□□□ 0.19
SSSCA1-206ENST00000531405 E7EQL1 145 aa16.24■□□□□ 0.19
SSSCA1-206ENST00000531405 SULT2B1O00204 365 aa16.24■□□□□ 0.19
SSSCA1-206ENST00000531405 DNAJA2O60884 412 aa16.24■□□□□ 0.19
SSSCA1-206ENST00000531405 BCAS1O75363 584 aaPredicted RBP16.24■□□□□ 0.19
SSSCA1-206ENST00000531405 SPAG7O75391 227 aa16.24■□□□□ 0.19
SSSCA1-206ENST00000531405 UGT2B17O75795 530 aa16.24■□□□□ 0.19
SSSCA1-206ENST00000531405 PGM3O95394 542 aa16.24■□□□□ 0.19
SSSCA1-206ENST00000531405 CSTAP01040 98 aa16.24■□□□□ 0.19
SSSCA1-206ENST00000531405 PRPS1L1P21108 318 aa16.24■□□□□ 0.19
SSSCA1-206ENST00000531405 MATN1P21941 496 aa16.24■□□□□ 0.19
SSSCA1-206ENST00000531405 ZNF83P51522 516 aa16.24■□□□□ 0.19
SSSCA1-206ENST00000531405 NUDT6P53370 316 aa16.24■□□□□ 0.19
SSSCA1-206ENST00000531405 ZNF141Q15928 474 aa16.24■□□□□ 0.19
SSSCA1-206ENST00000531405 PGS1Q32NB8 556 aa16.24■□□□□ 0.19
SSSCA1-206ENST00000531405 SYT14P1Q58G82 188 aa16.24■□□□□ 0.19
SSSCA1-206ENST00000531405 PODNL1Q6PEZ8 512 aa16.24■□□□□ 0.19
SSSCA1-206ENST00000531405 TMPPEQ6ZT21 453 aa16.24■□□□□ 0.19
SSSCA1-206ENST00000531405 C6orf120Q7Z4R8 191 aa16.24■□□□□ 0.19
SSSCA1-206ENST00000531405 UBE2J2Q8N2K1 259 aa16.24■□□□□ 0.19
SSSCA1-206ENST00000531405 NATD1Q8N6N6 113 aa16.24■□□□□ 0.19
SSSCA1-206ENST00000531405 ST8SIA1Q92185 356 aa16.24■□□□□ 0.19
SSSCA1-206ENST00000531405 ARL8AQ96BM9 186 aa16.24■□□□□ 0.19
SSSCA1-206ENST00000531405 PRPF18Q99633 342 aaKnown RBP16.24■□□□□ 0.19
SSSCA1-206ENST00000531405 RHNO1Q9BSD3 238 aa16.24■□□□□ 0.19
SSSCA1-206ENST00000531405 GRIP2Q9C0E4 1043 aa16.24■□□□□ 0.19
SSSCA1-206ENST00000531405 MKS1Q9NXB0 559 aa16.24■□□□□ 0.19
SSSCA1-206ENST00000531405 A0A096LNT2 108 aa16.23■□□□□ 0.19
SSSCA1-206ENST00000531405 GOLGA8QA0A0J9YX86 632 aa16.23■□□□□ 0.19
SSSCA1-206ENST00000531405 FAM234BA2RU67 622 aa16.23■□□□□ 0.19
SSSCA1-206ENST00000531405 GOLGA8OA6NCC3 632 aa16.23■□□□□ 0.19
SSSCA1-206ENST00000531405 A8MV72 311 aaPredicted RBP16.23■□□□□ 0.19
SSSCA1-206ENST00000531405 GOLGA8NF8WBI6 632 aa16.23■□□□□ 0.19
SSSCA1-206ENST00000531405 STX11O75558 287 aa16.23■□□□□ 0.19
SSSCA1-206ENST00000531405 TFPIP10646 304 aa16.23■□□□□ 0.19
SSSCA1-206ENST00000531405 G6PDP11413 515 aa16.23■□□□□ 0.19
SSSCA1-206ENST00000531405 CHRNEQ04844 493 aa16.23■□□□□ 0.19
SSSCA1-206ENST00000531405 MAPK14Q16539 360 aa16.23■□□□□ 0.19
SSSCA1-206ENST00000531405 NRF1Q16656 503 aa16.23■□□□□ 0.19
SSSCA1-206ENST00000531405 AGAP6Q5VW22 663 aa16.23■□□□□ 0.19
SSSCA1-206ENST00000531405 C11orf71Q6IPW1 123 aa16.23■□□□□ 0.19
SSSCA1-206ENST00000531405 P2RY8Q86VZ1 359 aa16.23■□□□□ 0.19
SSSCA1-206ENST00000531405 TUBGCP3Q96CW5 907 aa16.23■□□□□ 0.19
SSSCA1-206ENST00000531405 SLC35G5Q96KT7 338 aa16.23■□□□□ 0.19
SSSCA1-206ENST00000531405 SERINC1Q9NRX5 453 aa16.23■□□□□ 0.19
SSSCA1-206ENST00000531405 ACER3Q9NUN7 267 aa16.23■□□□□ 0.19
SSSCA1-206ENST00000531405 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.23■□□□□ 0.19
SSSCA1-206ENST00000531405 RNF103-CHMP3A0A140T963 221 aa16.22■□□□□ 0.19
SSSCA1-206ENST00000531405 CIB4A0PJX0 185 aa16.22■□□□□ 0.19
SSSCA1-206ENST00000531405 ZNF716A6NP11 495 aa16.22■□□□□ 0.19
SSSCA1-206ENST00000531405 IFNA2P01563 188 aa16.22■□□□□ 0.19
SSSCA1-206ENST00000531405 PGCP20142 388 aa16.22■□□□□ 0.19
SSSCA1-206ENST00000531405 TTKP33981 857 aa16.22■□□□□ 0.19
SSSCA1-206ENST00000531405 NTF4P34130 210 aa16.22■□□□□ 0.19
SSSCA1-206ENST00000531405 FOXG1P55316 489 aaPredicted RBP16.22■□□□□ 0.19
SSSCA1-206ENST00000531405 CSNK2A1P68400 391 aaPredicted RBP16.22■□□□□ 0.19
SSSCA1-206ENST00000531405 ARHGAP11BQ3KRB8 267 aa16.22■□□□□ 0.19
SSSCA1-206ENST00000531405 CHRFAM7AQ494W8 412 aa16.22■□□□□ 0.19
SSSCA1-206ENST00000531405 FBXW9Q5XUX1 488 aa16.22■□□□□ 0.19
SSSCA1-206ENST00000531405 OR4F3Q6IEY1 312 aa16.22■□□□□ 0.19
SSSCA1-206ENST00000531405 BHLHB9Q6PI77 547 aa16.22■□□□□ 0.19
SSSCA1-206ENST00000531405 SLC22A25Q6T423 547 aa16.22■□□□□ 0.19
SSSCA1-206ENST00000531405 B3GLCTQ6Y288 498 aa16.22■□□□□ 0.19
SSSCA1-206ENST00000531405 C16orf62Q7Z3J2 963 aa16.22■□□□□ 0.19
SSSCA1-206ENST00000531405 HMGN2P46Q86SG4 172 aa16.22■□□□□ 0.19
SSSCA1-206ENST00000531405 MTDHQ86UE4 582 aaKnown RBP16.22■□□□□ 0.19
SSSCA1-206ENST00000531405 TMEM234Q8WY98 164 aa16.22■□□□□ 0.19
SSSCA1-206ENST00000531405 ADAD1Q96M93 576 aaKnown RBP16.22■□□□□ 0.19
SSSCA1-206ENST00000531405 ZNF350Q9GZX5 532 aa16.22■□□□□ 0.19
SSSCA1-206ENST00000531405 OR51I1Q9H343 314 aa16.22■□□□□ 0.19
SSSCA1-206ENST00000531405 CTPS2Q9NRF8 586 aa16.22■□□□□ 0.19
SSSCA1-206ENST00000531405 EMC3Q9P0I2 261 aa16.22■□□□□ 0.19
SSSCA1-206ENST00000531405 POU2F3Q9UKI9 436 aa16.22■□□□□ 0.19
SSSCA1-206ENST00000531405 NOSIPQ9Y314 301 aaKnown RBP16.22■□□□□ 0.19
SSSCA1-206ENST00000531405 SLC25A15Q9Y619 301 aa16.22■□□□□ 0.19
SSSCA1-206ENST00000531405 IGKV3D-15A0A087WSY6 115 aa16.21■□□□□ 0.19
SSSCA1-206ENST00000531405 CCT8L1PA6NM43 557 aa16.21■□□□□ 0.19
SSSCA1-206ENST00000531405 RYKP34925 604 aa16.21■□□□□ 0.19
SSSCA1-206ENST00000531405 PGM1P36871 562 aa16.21■□□□□ 0.19
SSSCA1-206ENST00000531405 C6orf52Q5T4I8 152 aa16.21■□□□□ 0.19
SSSCA1-206ENST00000531405 TMEM108Q6UXF1 575 aa16.21■□□□□ 0.19
SSSCA1-206ENST00000531405 EIF3MQ7L2H7 374 aaKnown RBP16.21■□□□□ 0.19
SSSCA1-206ENST00000531405 HOMEZQ8IX15 550 aa16.21■□□□□ 0.19
SSSCA1-206ENST00000531405 OR10H5Q8NGA6 315 aa16.21■□□□□ 0.19
SSSCA1-206ENST00000531405 TCP10LQ8TDR4 215 aa16.21■□□□□ 0.19
SSSCA1-206ENST00000531405 SLC25A43Q8WUT9 341 aaPredicted RBP16.21■□□□□ 0.19
SSSCA1-206ENST00000531405 APH1AQ96BI3 265 aa16.21■□□□□ 0.19
SSSCA1-206ENST00000531405 ARL5BQ96KC2 179 aa16.21■□□□□ 0.19
SSSCA1-206ENST00000531405 DHRS9Q9BPW9 319 aa16.21■□□□□ 0.19
SSSCA1-206ENST00000531405 CCDC106Q9BWC9 280 aa16.21■□□□□ 0.19
SSSCA1-206ENST00000531405 C1QTNF6Q9BXI9 259 aa16.21■□□□□ 0.19
SSSCA1-206ENST00000531405 OR11A1Q9GZK7 315 aa16.21■□□□□ 0.19
SSSCA1-206ENST00000531405 CBLN4Q9NTU7 201 aa16.21■□□□□ 0.19
SSSCA1-206ENST00000531405 DUXAA6NLW8 204 aa16.2■□□□□ 0.18
SSSCA1-206ENST00000531405 M0R1B8 84 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms