RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 EFNA3P52797 238 aa3.42□□□□□ -1.86
C11orf88-204ENST00000529661 RPL23AP62750 156 aaKnown RBP3.42□□□□□ -1.86
C11orf88-204ENST00000529661 PLD1Q13393 1074 aa3.42□□□□□ -1.86
C11orf88-204ENST00000529661 C1orf61Q13536 156 aa3.42□□□□□ -1.86
C11orf88-204ENST00000529661 ELAVL3Q14576 367 aaKnown RBP3.42□□□□□ -1.86
C11orf88-204ENST00000529661 ATAD3CQ5T2N8 411 aa3.42□□□□□ -1.86
C11orf88-204ENST00000529661 LCE3EQ5T5B0 92 aa3.42□□□□□ -1.86
C11orf88-204ENST00000529661 KCNIP4Q6PIL6 250 aa3.42□□□□□ -1.86
C11orf88-204ENST00000529661 PAMR1Q6UXH9 720 aa3.42□□□□□ -1.86
C11orf88-204ENST00000529661 EFL1Q7Z2Z2 1120 aaKnown RBP3.42□□□□□ -1.86
C11orf88-204ENST00000529661 NANOGNBQ7Z5D8 188 aa3.42□□□□□ -1.86
C11orf88-204ENST00000529661 C11orf53Q8IXP5 236 aa3.42□□□□□ -1.86
C11orf88-204ENST00000529661 TYMSOSQ8TAI1 123 aa3.42□□□□□ -1.86
C11orf88-204ENST00000529661 GTSF1Q8WW33 167 aa3.42□□□□□ -1.86
C11orf88-204ENST00000529661 RASD2Q96D21 266 aa3.42□□□□□ -1.86
C11orf88-204ENST00000529661 CELF6Q96J87 481 aaKnown RBP3.42□□□□□ -1.86
C11orf88-204ENST00000529661 CYP2S1Q96SQ9 504 aa3.42□□□□□ -1.86
C11orf88-204ENST00000529661 ZNF670Q9BS34 389 aa3.42□□□□□ -1.86
C11orf88-204ENST00000529661 NIPSNAP3BQ9BS92 247 aa3.42□□□□□ -1.86
C11orf88-204ENST00000529661 TSSK1BQ9BXA7 367 aa3.42□□□□□ -1.86
C11orf88-204ENST00000529661 NXF5Q9H1B4 397 aaKnown RBP3.42□□□□□ -1.86
C11orf88-204ENST00000529661 SLC17A5Q9NRA2 495 aa3.42□□□□□ -1.86
C11orf88-204ENST00000529661 UFSP2Q9NUQ7 469 aa3.42□□□□□ -1.86
C11orf88-204ENST00000529661 B3GNT2Q9NY97 397 aa3.42□□□□□ -1.86
C11orf88-204ENST00000529661 IL36GQ9NZH8 169 aa3.42□□□□□ -1.86
C11orf88-204ENST00000529661 CLEC4AQ9UMR7 237 aa3.42□□□□□ -1.86
C11orf88-204ENST00000529661 POLDIP2Q9Y2S7 368 aa3.42□□□□□ -1.86
C11orf88-204ENST00000529661 FAM240BA0A1B0GVZ2 78 aa3.41□□□□□ -1.86
C11orf88-204ENST00000529661 LRP5LA4QPB2 252 aa3.41□□□□□ -1.86
C11orf88-204ENST00000529661 NCF1BA6NI72 391 aaPredicted RBP3.41□□□□□ -1.86
C11orf88-204ENST00000529661 NCF1CA8MVU1 366 aaPredicted RBP3.41□□□□□ -1.86
C11orf88-204ENST00000529661 G3V4G9 280 aa3.41□□□□□ -1.86
C11orf88-204ENST00000529661 GPX5O75715 221 aa3.41□□□□□ -1.86
C11orf88-204ENST00000529661 SCGNO76038 276 aa3.41□□□□□ -1.86
C11orf88-204ENST00000529661 LRATO95237 230 aa3.41□□□□□ -1.86
C11orf88-204ENST00000529661 IGHG4P01861 327 aa3.41□□□□□ -1.86
C11orf88-204ENST00000529661 FGF4P08620 206 aa3.41□□□□□ -1.86
C11orf88-204ENST00000529661 RHOXF2BP0C7M4 288 aa3.41□□□□□ -1.86
C11orf88-204ENST00000529661 DNAH10OSP0CZ25 163 aa3.41□□□□□ -1.86
C11orf88-204ENST00000529661 PCMT1P22061 227 aa3.41□□□□□ -1.86
C11orf88-204ENST00000529661 KRTAP5-9P26371 169 aa3.41□□□□□ -1.86
C11orf88-204ENST00000529661 ADORA2BP29275 332 aa3.41□□□□□ -1.86
C11orf88-204ENST00000529661 HNRNPA3P51991 378 aaKnown RBP3.41□□□□□ -1.86
C11orf88-204ENST00000529661 SUCLG1P53597 346 aaKnown RBP3.41□□□□□ -1.86
C11orf88-204ENST00000529661 RPS8P62241 208 aaKnown RBP3.41□□□□□ -1.86
C11orf88-204ENST00000529661 CD47Q08722 323 aa3.41□□□□□ -1.86
C11orf88-204ENST00000529661 NCBP1Q09161 790 aaKnown RBP3.41□□□□□ -1.86
C11orf88-204ENST00000529661 ARHGAP19Q14CB8 494 aa3.41□□□□□ -1.86
C11orf88-204ENST00000529661 RCN1Q15293 331 aa3.41□□□□□ -1.86
C11orf88-204ENST00000529661 PRR4Q16378 134 aa3.41□□□□□ -1.86
C11orf88-204ENST00000529661 QRICH1Q2TAL8 776 aa3.41□□□□□ -1.86
C11orf88-204ENST00000529661 SLC25A52Q3SY17 297 aa3.41□□□□□ -1.86
C11orf88-204ENST00000529661 TP53I3Q53FA7 332 aa3.41□□□□□ -1.86
C11orf88-204ENST00000529661 C1orf185Q5T7R7 199 aa3.41□□□□□ -1.86
C11orf88-204ENST00000529661 PRAMEF20Q5VT98 475 aa3.41□□□□□ -1.86
C11orf88-204ENST00000529661 METTL11BQ5VVY1 283 aa3.41□□□□□ -1.86
C11orf88-204ENST00000529661 ZSCAN25Q6NSZ9 544 aa3.41□□□□□ -1.86
C11orf88-204ENST00000529661 FAM199XQ6PEV8 388 aaPredicted RBP3.41□□□□□ -1.86
C11orf88-204ENST00000529661 C17orf82Q86X59 251 aaPredicted RBP3.41□□□□□ -1.86
C11orf88-204ENST00000529661 LRRC75A-AS1Q8N1F1 130 aa3.41□□□□□ -1.86
C11orf88-204ENST00000529661 CLEC4FQ8N1N0 589 aa3.41□□□□□ -1.86
C11orf88-204ENST00000529661 DHRSXQ8N5I4 330 aa3.41□□□□□ -1.86
C11orf88-204ENST00000529661 FAM184AQ8NB25 1140 aa3.41□□□□□ -1.86
C11orf88-204ENST00000529661 KLHL30-AS1Q8NEE0 82 aa3.41□□□□□ -1.86
C11orf88-204ENST00000529661 OR5L2Q8NGL0 311 aa3.41□□□□□ -1.86
C11orf88-204ENST00000529661 OR5D13Q8NGL4 314 aa3.41□□□□□ -1.86
C11orf88-204ENST00000529661 RHOXF2Q9BQY4 288 aa3.41□□□□□ -1.86
C11orf88-204ENST00000529661 MTG1Q9BT17 334 aaPredicted RBP3.41□□□□□ -1.86
C11orf88-204ENST00000529661 SPATA16Q9BXB7 569 aa3.41□□□□□ -1.86
C11orf88-204ENST00000529661 NAT10Q9H0A0 1025 aaKnown RBP3.41□□□□□ -1.86
C11orf88-204ENST00000529661 MAGT1Q9H0U3 335 aa3.41□□□□□ -1.86
C11orf88-204ENST00000529661 RHBGQ9H310 441 aa3.41□□□□□ -1.86
C11orf88-204ENST00000529661 LRRN3Q9H3W5 708 aa3.41□□□□□ -1.86
C11orf88-204ENST00000529661 SMYD3Q9H7B4 428 aa3.41□□□□□ -1.86
C11orf88-204ENST00000529661 MIEF1Q9NQG6 463 aa3.41□□□□□ -1.86
C11orf88-204ENST00000529661 ETNK2Q9NVF9 386 aa3.41□□□□□ -1.86
C11orf88-204ENST00000529661 RSPH14Q9UHP6 348 aa3.41□□□□□ -1.86
C11orf88-204ENST00000529661 CFAP45Q9UL16 551 aa3.41□□□□□ -1.86
C11orf88-204ENST00000529661 PLEKHG2Q9H7P9 1386 aa3.4□□□□□ -1.86
C11orf88-204ENST00000529661 A0A1B0GWB2 263 aa3.4□□□□□ -1.87
C11orf88-204ENST00000529661 SULT2B1O00204 365 aa3.4□□□□□ -1.87
C11orf88-204ENST00000529661 ZNF208O43345 1280 aa3.4□□□□□ -1.87
C11orf88-204ENST00000529661 SPOPO43791 374 aa3.4□□□□□ -1.87
C11orf88-204ENST00000529661 CTAG2O75638 210 aa3.4□□□□□ -1.87
C11orf88-204ENST00000529661 AGTP01019 485 aa3.4□□□□□ -1.87
C11orf88-204ENST00000529661 THY1P04216 161 aa3.4□□□□□ -1.87
C11orf88-204ENST00000529661 POLR2MP0CAP2 368 aa3.4□□□□□ -1.87
C11orf88-204ENST00000529661 ANXA8P13928 327 aa3.4□□□□□ -1.87
C11orf88-204ENST00000529661 POLR2EP19388 210 aaKnown RBP3.4□□□□□ -1.87
C11orf88-204ENST00000529661 NMT1P30419 496 aaKnown RBP3.4□□□□□ -1.87
C11orf88-204ENST00000529661 ANP32AP39687 249 aaKnown RBP3.4□□□□□ -1.87
C11orf88-204ENST00000529661 MDH2P40926 338 aaKnown RBP3.4□□□□□ -1.87
C11orf88-204ENST00000529661 CASP4P49662 377 aa3.4□□□□□ -1.87
C11orf88-204ENST00000529661 ETV1P50549 477 aa3.4□□□□□ -1.87
C11orf88-204ENST00000529661 PRMT2P55345 433 aa3.4□□□□□ -1.87
C11orf88-204ENST00000529661 DMTNQ08495 405 aa3.4□□□□□ -1.87
C11orf88-204ENST00000529661 SFT2D3Q587I9 215 aa3.4□□□□□ -1.87
C11orf88-204ENST00000529661 HSP90B2PQ58FF3 399 aa3.4□□□□□ -1.87
C11orf88-204ENST00000529661 UTF1Q5T230 341 aa3.4□□□□□ -1.87
C11orf88-204ENST00000529661 BEND3Q5T5X7 828 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms