RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 APOBEC1P41238 236 aaKnown RBP9.69□□□□□ -0.86
NEDD8-205ENST00000527046 EIF1P41567 113 aaKnown RBP9.69□□□□□ -0.86
NEDD8-205ENST00000527046 CCR4P51679 360 aa9.69□□□□□ -0.86
NEDD8-205ENST00000527046 ZNF41P51814 821 aaPredicted RBP9.69□□□□□ -0.86
NEDD8-205ENST00000527046 CDH12P55289 794 aa9.69□□□□□ -0.86
NEDD8-205ENST00000527046 LSM11P83369 360 aaKnown RBP eCLIP9.69□□□□□ -0.86
NEDD8-205ENST00000527046 VLDLRP98155 873 aa9.69□□□□□ -0.86
NEDD8-205ENST00000527046 TRAP1Q12931 704 aaKnown RBP9.69□□□□□ -0.86
NEDD8-205ENST00000527046 ESPL1Q14674 2120 aa9.69□□□□□ -0.86
NEDD8-205ENST00000527046 ENTPD8Q5MY95 495 aa9.69□□□□□ -0.86
NEDD8-205ENST00000527046 RAET1LQ5VY80 246 aa9.69□□□□□ -0.86
NEDD8-205ENST00000527046 WBP2NLQ6ICG8 309 aa9.69□□□□□ -0.86
NEDD8-205ENST00000527046 TMCO5AQ8N6Q1 288 aa9.69□□□□□ -0.86
NEDD8-205ENST00000527046 TNIP2Q8NFZ5 429 aa9.69□□□□□ -0.86
NEDD8-205ENST00000527046 OR5M9Q8NGP3 310 aa9.69□□□□□ -0.86
NEDD8-205ENST00000527046 VANGL1Q8TAA9 524 aaPredicted RBP9.69□□□□□ -0.86
NEDD8-205ENST00000527046 SLC26A7Q8TE54 656 aa9.69□□□□□ -0.86
NEDD8-205ENST00000527046 RASSF5Q8WWW0 418 aa9.69□□□□□ -0.86
NEDD8-205ENST00000527046 SLC38A4Q969I6 547 aa9.69□□□□□ -0.86
NEDD8-205ENST00000527046 RELTQ969Z4 430 aa9.69□□□□□ -0.86
NEDD8-205ENST00000527046 FAM162AQ96A26 154 aa9.69□□□□□ -0.86
NEDD8-205ENST00000527046 ASB9Q96DX5 294 aa9.69□□□□□ -0.86
NEDD8-205ENST00000527046 PYURFQ96I23 114 aa9.69□□□□□ -0.86
NEDD8-205ENST00000527046 TPD52L3Q96J77 140 aa9.69□□□□□ -0.86
NEDD8-205ENST00000527046 HSH2DQ96JZ2 352 aa9.69□□□□□ -0.86
NEDD8-205ENST00000527046 ARL5BQ96KC2 179 aa9.69□□□□□ -0.86
NEDD8-205ENST00000527046 SFXN2Q96NB2 322 aa9.69□□□□□ -0.86
NEDD8-205ENST00000527046 PIGQQ9BRB3 760 aa9.69□□□□□ -0.86
NEDD8-205ENST00000527046 LDAHQ9H6V9 325 aa9.69□□□□□ -0.86
NEDD8-205ENST00000527046 COQ10BQ9H8M1 238 aa9.69□□□□□ -0.86
NEDD8-205ENST00000527046 NDUFAF4Q9P032 175 aa9.69□□□□□ -0.86
NEDD8-205ENST00000527046 MAGEL2Q9UJ55 1249 aa9.69□□□□□ -0.86
NEDD8-205ENST00000527046 TINAGQ9UJW2 476 aa9.69□□□□□ -0.86
NEDD8-205ENST00000527046 ACAD8Q9UKU7 415 aa9.69□□□□□ -0.86
NEDD8-205ENST00000527046 BAG5Q9UL15 447 aa9.69□□□□□ -0.86
NEDD8-205ENST00000527046 MPDZO75970 2070 aa9.68□□□□□ -0.86
NEDD8-205ENST00000527046 TMED7-TICAM2A0A0A6YYA0 188 aa9.68□□□□□ -0.86
NEDD8-205ENST00000527046 H3BML4 177 aa9.68□□□□□ -0.86
NEDD8-205ENST00000527046 LINC01387J3KSC0 135 aa9.68□□□□□ -0.86
NEDD8-205ENST00000527046 FZD7O75084 574 aa9.68□□□□□ -0.86
NEDD8-205ENST00000527046 ZNF682O95780 498 aa9.68□□□□□ -0.86
NEDD8-205ENST00000527046 IMPDH2P12268 514 aa9.68□□□□□ -0.86
NEDD8-205ENST00000527046 GP1BBP13224 206 aa9.68□□□□□ -0.86
NEDD8-205ENST00000527046 ELK4P28324 431 aa9.68□□□□□ -0.86
NEDD8-205ENST00000527046 CA7P43166 264 aa9.68□□□□□ -0.86
NEDD8-205ENST00000527046 YAP1P46937 504 aaKnown RBP9.68□□□□□ -0.86
NEDD8-205ENST00000527046 RGS8P57771 180 aaPredicted RBP9.68□□□□□ -0.86
NEDD8-205ENST00000527046 LTBQ06643 244 aa9.68□□□□□ -0.86
NEDD8-205ENST00000527046 MERTKQ12866 999 aa9.68□□□□□ -0.86
NEDD8-205ENST00000527046 PIN1Q13526 163 aaPredicted RBP9.68□□□□□ -0.86
NEDD8-205ENST00000527046 CCDC121Q6ZUS5 278 aa9.68□□□□□ -0.86
NEDD8-205ENST00000527046 NCCRP1Q6ZVX7 275 aaPredicted RBP9.68□□□□□ -0.86
NEDD8-205ENST00000527046 YTHDF3Q7Z739 585 aaKnown RBP9.68□□□□□ -0.86
NEDD8-205ENST00000527046 ZNF605Q86T29 641 aa9.68□□□□□ -0.86
NEDD8-205ENST00000527046 DHFR2Q86XF0 187 aa9.68□□□□□ -0.86
NEDD8-205ENST00000527046 EID3Q8N140 333 aa9.68□□□□□ -0.86
NEDD8-205ENST00000527046 LILRA2Q8N149 483 aa9.68□□□□□ -0.86
NEDD8-205ENST00000527046 CADM2Q8N3J6 435 aa9.68□□□□□ -0.86
NEDD8-205ENST00000527046 ZNF563Q8TA94 476 aa9.68□□□□□ -0.86
NEDD8-205ENST00000527046 ZPLD1Q8TCW7 415 aa9.68□□□□□ -0.86
NEDD8-205ENST00000527046 ADAMTS16Q8TE57 1224 aa9.68□□□□□ -0.86
NEDD8-205ENST00000527046 TMEM234Q8WY98 164 aa9.68□□□□□ -0.86
NEDD8-205ENST00000527046 SARAFQ96BY9 339 aa9.68□□□□□ -0.86
NEDD8-205ENST00000527046 ZNF845Q96IR2 970 aaPredicted RBP9.68□□□□□ -0.86
NEDD8-205ENST00000527046 NSMCE2Q96MF7 247 aa9.68□□□□□ -0.86
NEDD8-205ENST00000527046 UCN2Q96RP3 112 aa9.68□□□□□ -0.86
NEDD8-205ENST00000527046 DMRTA2Q96SC8 542 aa9.68□□□□□ -0.86
NEDD8-205ENST00000527046 TUBA1CQ9BQE3 449 aa9.68□□□□□ -0.86
NEDD8-205ENST00000527046 ZNF559Q9BR84 538 aa9.68□□□□□ -0.86
NEDD8-205ENST00000527046 FUZQ9BT04 418 aa9.68□□□□□ -0.86
NEDD8-205ENST00000527046 ZNF426Q9BUY5 554 aa9.68□□□□□ -0.86
NEDD8-205ENST00000527046 TRIM2Q9C040 744 aa9.68□□□□□ -0.86
NEDD8-205ENST00000527046 OR11A1Q9GZK7 315 aa9.68□□□□□ -0.86
NEDD8-205ENST00000527046 ARMC7Q9H6L4 198 aa9.68□□□□□ -0.86
NEDD8-205ENST00000527046 TMEM185BQ9H7F4 350 aa9.68□□□□□ -0.86
NEDD8-205ENST00000527046 EVA1AQ9H8M9 152 aa9.68□□□□□ -0.86
NEDD8-205ENST00000527046 MAN2C1Q9NTJ4 1040 aa9.68□□□□□ -0.86
NEDD8-205ENST00000527046 ADPRHL2Q9NX46 363 aa9.68□□□□□ -0.86
NEDD8-205ENST00000527046 TESQ9UGI8 421 aaKnown RBP9.68□□□□□ -0.86
NEDD8-205ENST00000527046 OSGIN2Q9Y236 505 aa9.68□□□□□ -0.86
NEDD8-205ENST00000527046 TMED7Q9Y3B3 224 aa9.68□□□□□ -0.86
NEDD8-205ENST00000527046 ARHGAP21Q5T5U3 1957 aa9.68□□□□□ -0.86
NEDD8-205ENST00000527046 PHF3Q92576 2039 aaKnown RBP9.67□□□□□ -0.86
NEDD8-205ENST00000527046 A0A087WUJ7 227 aa9.67□□□□□ -0.86
NEDD8-205ENST00000527046 A0A1W2PNR3 127 aa9.67□□□□□ -0.86
NEDD8-205ENST00000527046 TCRBV3S1A0A5B6 114 aa9.67□□□□□ -0.86
NEDD8-205ENST00000527046 CLEC18AA5D8T8 446 aa9.67□□□□□ -0.86
NEDD8-205ENST00000527046 CPSF4LA6NMK7 179 aaKnown RBP9.67□□□□□ -0.86
NEDD8-205ENST00000527046 AHRRA9YTQ3 701 aa9.67□□□□□ -0.86
NEDD8-205ENST00000527046 BCKDKO14874 412 aa9.67□□□□□ -0.86
NEDD8-205ENST00000527046 PEPDP12955 493 aa9.67□□□□□ -0.86
NEDD8-205ENST00000527046 CCNA2P20248 432 aa9.67□□□□□ -0.86
NEDD8-205ENST00000527046 RASSF2P50749 326 aa9.67□□□□□ -0.86
NEDD8-205ENST00000527046 POLR2HP52434 150 aaKnown RBP9.67□□□□□ -0.86
NEDD8-205ENST00000527046 TMEM176BQ3YBM2 270 aaPredicted RBP9.67□□□□□ -0.86
NEDD8-205ENST00000527046 IFI44LQ53G44 452 aa9.67□□□□□ -0.86
NEDD8-205ENST00000527046 AAGABQ6PD74 315 aa9.67□□□□□ -0.86
NEDD8-205ENST00000527046 ZNF613Q6PF04 617 aa9.67□□□□□ -0.86
NEDD8-205ENST00000527046 ULK3Q6PHR2 472 aa9.67□□□□□ -0.86
NEDD8-205ENST00000527046 POMZP3Q6PJE2 187 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms