RNA–Protein interactions for RNA: ENST00000526696.6

SSRP1-203, Transcript of structure specific recognition protein 1, humanhuman

TSL 3

Gene SSRP1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-203ENST00000526696 LRRC39Q96DD0 335 aa11.6□□□□□ -0.55
SSRP1-203ENST00000526696 PBKQ96KB5 322 aa11.6□□□□□ -0.55
SSRP1-203ENST00000526696 KCNS3Q9BQ31 491 aa11.6□□□□□ -0.55
SSRP1-203ENST00000526696 GLIPR2Q9H4G4 154 aa11.6□□□□□ -0.55
SSRP1-203ENST00000526696 ELOVL6Q9H5J4 265 aa11.6□□□□□ -0.55
SSRP1-203ENST00000526696 HHATLQ9HCP6 504 aa11.6□□□□□ -0.55
SSRP1-203ENST00000526696 ZNF69Q9UC07 566 aa11.6□□□□□ -0.55
SSRP1-203ENST00000526696 ACTL7BQ9Y614 415 aa11.6□□□□□ -0.55
SSRP1-203ENST00000526696 ETV2O00321 342 aaPredicted RBP11.59□□□□□ -0.55
SSRP1-203ENST00000526696 PPP6CO00743 305 aa11.59□□□□□ -0.55
SSRP1-203ENST00000526696 RP2O75695 350 aa11.59□□□□□ -0.55
SSRP1-203ENST00000526696 KCNK2O95069 426 aa11.59□□□□□ -0.55
SSRP1-203ENST00000526696 NUDT14O95848 222 aa11.59□□□□□ -0.55
SSRP1-203ENST00000526696 ACP2P11117 423 aa11.59□□□□□ -0.55
SSRP1-203ENST00000526696 ACHEP22303 614 aa11.59□□□□□ -0.55
SSRP1-203ENST00000526696 FNTAP49354 379 aa11.59□□□□□ -0.55
SSRP1-203ENST00000526696 SLC16A1P53985 500 aa11.59□□□□□ -0.55
SSRP1-203ENST00000526696 GGTA1PQ4G0N0 100 aa11.59□□□□□ -0.55
SSRP1-203ENST00000526696 VAX1Q5SQQ9 334 aa11.59□□□□□ -0.55
SSRP1-203ENST00000526696 DCAF12L2Q5VW00 463 aa11.59□□□□□ -0.55
SSRP1-203ENST00000526696 GALNT18Q6P9A2 607 aa11.59□□□□□ -0.55
SSRP1-203ENST00000526696 TMPPEQ6ZT21 453 aa11.59□□□□□ -0.55
SSRP1-203ENST00000526696 RPS27LQ71UM5 84 aaKnown RBP11.59□□□□□ -0.55
SSRP1-203ENST00000526696 CEP70Q8NHQ1 597 aa11.59□□□□□ -0.55
SSRP1-203ENST00000526696 RHEBL1Q8TAI7 183 aa11.59□□□□□ -0.55
SSRP1-203ENST00000526696 FBXO30Q8TB52 745 aa11.59□□□□□ -0.55
SSRP1-203ENST00000526696 ATP6V1E2Q96A05 226 aa11.59□□□□□ -0.55
SSRP1-203ENST00000526696 BOD1Q96IK1 185 aa11.59□□□□□ -0.55
SSRP1-203ENST00000526696 QRSL1Q9H0R6 528 aaKnown RBP11.59□□□□□ -0.55
SSRP1-203ENST00000526696 C7orf69Q9H7B7 122 aa11.59□□□□□ -0.55
SSRP1-203ENST00000526696 ZNF665Q9H7R5 613 aa11.59□□□□□ -0.55
SSRP1-203ENST00000526696 BRF2Q9HAW0 419 aa11.59□□□□□ -0.55
SSRP1-203ENST00000526696 UBQLN4Q9NRR5 601 aa11.59□□□□□ -0.55
SSRP1-203ENST00000526696 CRNNQ9UBG3 495 aaPredicted RBP11.59□□□□□ -0.55
SSRP1-203ENST00000526696 CARD8Q9Y2G2 431 aa11.59□□□□□ -0.55
SSRP1-203ENST00000526696 JRKLQ9Y4A0 524 aa11.59□□□□□ -0.55
SSRP1-203ENST00000526696 SYCE1LA8MT33 242 aa11.58□□□□□ -0.56
SSRP1-203ENST00000526696 G3V4G9 280 aa11.58□□□□□ -0.56
SSRP1-203ENST00000526696 CLDN34H7C241 214 aa11.58□□□□□ -0.56
SSRP1-203ENST00000526696 PGRMC1O00264 195 aaKnown RBP11.58□□□□□ -0.56
SSRP1-203ENST00000526696 SCDO00767 359 aa11.58□□□□□ -0.56
SSRP1-203ENST00000526696 TP73O15350 636 aa11.58□□□□□ -0.56
SSRP1-203ENST00000526696 PPIHO43447 177 aaKnown RBP11.58□□□□□ -0.56
SSRP1-203ENST00000526696 PCDH7O60245 1069 aa11.58□□□□□ -0.56
SSRP1-203ENST00000526696 KNG1P01042 644 aa11.58□□□□□ -0.56
SSRP1-203ENST00000526696 IGLV1-44P01699 117 aa11.58□□□□□ -0.56
SSRP1-203ENST00000526696 CELA3BP08861 270 aa11.58□□□□□ -0.56
SSRP1-203ENST00000526696 CDH2P19022 906 aaPredicted RBP11.58□□□□□ -0.56
SSRP1-203ENST00000526696 TCN1P20061 433 aaPredicted RBP11.58□□□□□ -0.56
SSRP1-203ENST00000526696 MPGP29372 298 aa11.58□□□□□ -0.56
SSRP1-203ENST00000526696 GPC1P35052 558 aa11.58□□□□□ -0.56
SSRP1-203ENST00000526696 P2RX1P51575 399 aa11.58□□□□□ -0.56
SSRP1-203ENST00000526696 TUBA1BP68363 451 aa11.58□□□□□ -0.56
SSRP1-203ENST00000526696 TUBA4AP68366 448 aa11.58□□□□□ -0.56
SSRP1-203ENST00000526696 PPP1R7Q15435 360 aa11.58□□□□□ -0.56
SSRP1-203ENST00000526696 ZNF311Q5JNZ3 666 aa11.58□□□□□ -0.56
SSRP1-203ENST00000526696 CCNJQ5T5M9 372 aa11.58□□□□□ -0.56
SSRP1-203ENST00000526696 C1QTNF12Q5T7M4 302 aa11.58□□□□□ -0.56
SSRP1-203ENST00000526696 CASP12Q6UXS9 341 aa11.58□□□□□ -0.56
SSRP1-203ENST00000526696 TUBA1AQ71U36 451 aa11.58□□□□□ -0.56
SSRP1-203ENST00000526696 CCDC103Q8IW40 242 aa11.58□□□□□ -0.56
SSRP1-203ENST00000526696 OR4F15Q8NGB8 312 aa11.58□□□□□ -0.56
SSRP1-203ENST00000526696 PHOSPHO1Q8TCT1 267 aa11.58□□□□□ -0.56
SSRP1-203ENST00000526696 SELENOMQ8WWX9 145 aa11.58□□□□□ -0.56
SSRP1-203ENST00000526696 RDH5Q92781 318 aa11.58□□□□□ -0.56
SSRP1-203ENST00000526696 UBE2FQ969M7 185 aa11.58□□□□□ -0.56
SSRP1-203ENST00000526696 SLC25A28Q96A46 364 aa11.58□□□□□ -0.56
SSRP1-203ENST00000526696 DNAJA3Q96EY1 480 aa11.58□□□□□ -0.56
SSRP1-203ENST00000526696 AMDHD1Q96NU7 426 aa11.58□□□□□ -0.56
SSRP1-203ENST00000526696 MID2Q9UJV3 735 aa11.58□□□□□ -0.56
SSRP1-203ENST00000526696 PCTPQ9UKL6 214 aa11.58□□□□□ -0.56
SSRP1-203ENST00000526696 SACSQ9NZJ4 4579 aa11.58□□□□□ -0.56
SSRP1-203ENST00000526696 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.57□□□□□ -0.56
SSRP1-203ENST00000526696 TTC36A6NLP5 189 aa11.57□□□□□ -0.56
SSRP1-203ENST00000526696 SULT2B1O00204 365 aa11.57□□□□□ -0.56
SSRP1-203ENST00000526696 SCAMP2O15127 329 aaKnown RBP11.57□□□□□ -0.56
SSRP1-203ENST00000526696 NCR1O76036 304 aa11.57□□□□□ -0.56
SSRP1-203ENST00000526696 SLITRK5O94991 958 aa11.57□□□□□ -0.56
SSRP1-203ENST00000526696 ANPEPP15144 967 aa11.57□□□□□ -0.56
SSRP1-203ENST00000526696 HPGDP15428 266 aa11.57□□□□□ -0.56
SSRP1-203ENST00000526696 PCGF2P35227 344 aa11.57□□□□□ -0.56
SSRP1-203ENST00000526696 ASMTP46597 345 aa11.57□□□□□ -0.56
SSRP1-203ENST00000526696 TMEM33P57088 247 aa11.57□□□□□ -0.56
SSRP1-203ENST00000526696 POU3F1Q03052 451 aaPredicted RBP11.57□□□□□ -0.56
SSRP1-203ENST00000526696 ILF2Q12905 390 aaKnown RBP11.57□□□□□ -0.56
SSRP1-203ENST00000526696 HEPACAMQ14CZ8 416 aa11.57□□□□□ -0.56
SSRP1-203ENST00000526696 DUSP5Q16690 384 aa11.57□□□□□ -0.56
SSRP1-203ENST00000526696 TBRG1Q3YBR2 411 aa11.57□□□□□ -0.56
SSRP1-203ENST00000526696 SLC9B1Q4ZJI4 515 aa11.57□□□□□ -0.56
SSRP1-203ENST00000526696 KLF17Q5JT82 389 aaPredicted RBP11.57□□□□□ -0.56
SSRP1-203ENST00000526696 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.57□□□□□ -0.56
SSRP1-203ENST00000526696 LETMD1Q6P1Q0 360 aa11.57□□□□□ -0.56
SSRP1-203ENST00000526696 C3orf33Q6P1S2 294 aa11.57□□□□□ -0.56
SSRP1-203ENST00000526696 BRICD5Q6PL45 260 aa11.57□□□□□ -0.56
SSRP1-203ENST00000526696 KLHL24Q6TFL4 600 aa11.57□□□□□ -0.56
SSRP1-203ENST00000526696 C17orf107Q6ZR85 190 aa11.57□□□□□ -0.56
SSRP1-203ENST00000526696 RAPH1Q70E73 1250 aa11.57□□□□□ -0.56
SSRP1-203ENST00000526696 GIMAP5Q96F15 307 aa11.57□□□□□ -0.56
SSRP1-203ENST00000526696 OTUB1Q96FW1 271 aaPredicted RBP11.57□□□□□ -0.56
SSRP1-203ENST00000526696 CPNE1Q99829 537 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms