RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 EURLQ9NYK6 297 aa1.3□□□□□ -2.2
CD44-212ENST00000524922 HACD3Q9P035 362 aa1.3□□□□□ -2.2
CD44-212ENST00000524922 ADAM22Q9P0K1 906 aa1.3□□□□□ -2.2
CD44-212ENST00000524922 RHCGQ9UBD6 479 aa1.3□□□□□ -2.2
CD44-212ENST00000524922 NOL12Q9UGY1 213 aaKnown RBP eCLIP1.3□□□□□ -2.2
CD44-212ENST00000524922 KLHL21Q9UJP4 597 aa1.3□□□□□ -2.2
CD44-212ENST00000524922 FBXO2Q9UK22 296 aaPredicted RBP1.3□□□□□ -2.2
CD44-212ENST00000524922 MAN1B1Q9UKM7 699 aa1.3□□□□□ -2.2
CD44-212ENST00000524922 KCNE2Q9Y6J6 123 aa1.3□□□□□ -2.2
CD44-212ENST00000524922 FAM169AQ9Y6X4 670 aa1.3□□□□□ -2.2
CD44-212ENST00000524922 HERC1Q15751 4861 aa1.3□□□□□ -2.2
CD44-212ENST00000524922 DOCK4Q8N1I0 1966 aa1.3□□□□□ -2.2
CD44-212ENST00000524922 PHF3Q92576 2039 aaKnown RBP1.3□□□□□ -2.2
CD44-212ENST00000524922 PIKFYVEQ9Y2I7 2098 aa1.3□□□□□ -2.2
CD44-212ENST00000524922 DOCK10Q96BY6 2186 aa1.3□□□□□ -2.2
CD44-212ENST00000524922 CPAMD8Q8IZJ3 1885 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 RAI1Q7Z5J4 1906 aaPredicted RBP1.29□□□□□ -2.2
CD44-212ENST00000524922 IGLV3-16A0A075B6K0 115 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 PPIAL4EA0A075B759 164 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 KCNE1BA0A087WTH5 132 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 PPIAL4CA0A0B4J2A2 164 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 A0A1W2PRB8 838 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 FEZF1A0PJY2 475 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 ELOVL7A1L3X0 281 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 C5orf63A6NC05 138 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 NKX2-6A6NCS4 301 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 TRIM64A6NGJ6 449 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 FRG2CA6NGY1 282 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 TRIM64BA6NI03 449 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 GABRR3A8MPY1 467 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 A8MU76 341 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 PDZK1P1A8MUH7 402 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 A8MXE2 369 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 NPIPA5E9PKD4 350 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 PPIAL4DF5H284 164 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 C3orf84H3BNL1 204 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 H7C0S8 307 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 LIN7AO14910 233 aaPredicted RBP1.29□□□□□ -2.2
CD44-212ENST00000524922 CASKO14936 926 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 TFECO14948 347 aaPredicted RBP1.29□□□□□ -2.2
CD44-212ENST00000524922 NDUFS4O43181 175 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 IDH3BO43837 385 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 PRPSAP2O60256 369 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 ALOX12BO75342 701 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 VPS26AO75436 327 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 DFFBO76075 338 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 CDK14O94921 469 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 RCBTB2O95199 551 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 NSA2O95478 260 aaKnown RBP1.29□□□□□ -2.2
CD44-212ENST00000524922 AP2A1O95782 977 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 IGKV3-15P01624 115 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 EIF2S1P05198 315 aaKnown RBP1.29□□□□□ -2.2
CD44-212ENST00000524922 RHOXF2BP0C7M4 288 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 SLC35G4P0C7Q5 338 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 DANCRP0C864 163 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 C8orf89P0DMQ9 161 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 PPIAL4FP0DN26 164 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 IGHV4-31P0DP07 118 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 RALBP11234 206 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 ERGP11308 486 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 PVRP15151 417 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 CPN1P15169 458 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 CYP11B1P15538 503 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 ADRA2CP18825 462 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 IL11P20809 199 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 CDH3P22223 829 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 CA6P23280 308 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 JAK1P23458 1154 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 LOXP28300 417 aaPredicted RBP1.29□□□□□ -2.2
CD44-212ENST00000524922 ATP5DP30049 168 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 SDC4P31431 198 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 PCK1P35558 622 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 HSD17B2P37059 387 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 GCLMP48507 274 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 CCT5P48643 541 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 CASP4P49662 377 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 DNA2P51530 1060 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 ATP5J2P56134 94 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 MLF1P58340 268 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 CSNK2BP67870 215 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 DLK1P80370 383 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 GBE1Q04446 702 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 KLC1Q07866 573 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 TNK1Q13470 666 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 ARHGAP19Q14CB8 494 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 CYTH1Q15438 398 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 SIX1Q15475 284 aaPredicted RBP1.29□□□□□ -2.2
CD44-212ENST00000524922 TAF13Q15543 124 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 ZNHIT3Q15649 155 aaPredicted RBP1.29□□□□□ -2.2
CD44-212ENST00000524922 TBCEQ15813 527 aaPredicted RBP1.29□□□□□ -2.2
CD44-212ENST00000524922 BCL2A1Q16548 175 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 DPYSL2Q16555 572 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 CLEC12BQ2HXU8 276 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 GPR33Q49SQ1 333 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 ACSF3Q4G176 576 aaPredicted RBP1.29□□□□□ -2.2
CD44-212ENST00000524922 FILIP1LQ4L180 1135 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 SLC25A53Q5H9E4 307 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 WLSQ5T9L3 541 aa1.29□□□□□ -2.2
CD44-212ENST00000524922 INTS11Q5TA45 600 aaKnown RBP1.29□□□□□ -2.2
CD44-212ENST00000524922 SAXO2Q658L1 398 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms