RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 VPS33AQ96AX1 596 aa16.62■□□□□ 0.25
SPIDR-220ENST00000522900 PSD2Q9BQI7 771 aa16.62■□□□□ 0.25
SPIDR-220ENST00000522900 ACTR6Q9GZN1 396 aa16.62■□□□□ 0.25
SPIDR-220ENST00000522900 ZIM2Q9NZV7 527 aa16.62■□□□□ 0.25
SPIDR-220ENST00000522900 LIPT1Q9Y234 373 aa16.62■□□□□ 0.25
SPIDR-220ENST00000522900 GCM2O75603 506 aaPredicted RBP16.61■□□□□ 0.25
SPIDR-220ENST00000522900 NR2F1P10589 423 aa16.61■□□□□ 0.25
SPIDR-220ENST00000522900 ETFAP13804 333 aa16.61■□□□□ 0.25
SPIDR-220ENST00000522900 CCNA2P20248 432 aa16.61■□□□□ 0.25
SPIDR-220ENST00000522900 EDNRAP25101 427 aa16.61■□□□□ 0.25
SPIDR-220ENST00000522900 IDH2P48735 452 aaKnown RBP16.61■□□□□ 0.25
SPIDR-220ENST00000522900 DIO1P49895 249 aa16.61■□□□□ 0.25
SPIDR-220ENST00000522900 POLR2JP52435 117 aaKnown RBP16.61■□□□□ 0.25
SPIDR-220ENST00000522900 FOXD4Q12950 439 aaPredicted RBP16.61■□□□□ 0.25
SPIDR-220ENST00000522900 SYT14P1Q58G82 188 aa16.61■□□□□ 0.25
SPIDR-220ENST00000522900 TTMPQ5BVD1 217 aa16.61■□□□□ 0.25
SPIDR-220ENST00000522900 TMPPEQ6ZT21 453 aa16.61■□□□□ 0.25
SPIDR-220ENST00000522900 ADGRG3Q86Y34 549 aa16.61■□□□□ 0.25
SPIDR-220ENST00000522900 SLC43A2Q8N370 569 aa16.61■□□□□ 0.25
SPIDR-220ENST00000522900 AURKBQ96GD4 344 aaPredicted RBP16.61■□□□□ 0.25
SPIDR-220ENST00000522900 ARL5BQ96KC2 179 aa16.61■□□□□ 0.25
SPIDR-220ENST00000522900 ZNF300Q96RE9 604 aaPredicted RBP16.61■□□□□ 0.25
SPIDR-220ENST00000522900 MTHFD2LQ9H903 347 aaPredicted RBP16.61■□□□□ 0.25
SPIDR-220ENST00000522900 GP6Q9HCN6 339 aa16.61■□□□□ 0.25
SPIDR-220ENST00000522900 SLCO1B3Q9NPD5 702 aa16.61■□□□□ 0.25
SPIDR-220ENST00000522900 EXOSC3Q9NQT5 275 aaKnown RBP16.61■□□□□ 0.25
SPIDR-220ENST00000522900 GPR52Q9Y2T5 361 aa16.61■□□□□ 0.25
SPIDR-220ENST00000522900 HEATR5AQ86XA9 2040 aa16.6■□□□□ 0.25
SPIDR-220ENST00000522900 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.6■□□□□ 0.25
SPIDR-220ENST00000522900 ZNF814B7Z6K7 855 aa16.6■□□□□ 0.25
SPIDR-220ENST00000522900 CYTIPO60759 359 aa16.6■□□□□ 0.25
SPIDR-220ENST00000522900 KRT75O95678 551 aa16.6■□□□□ 0.25
SPIDR-220ENST00000522900 FESP07332 822 aa16.6■□□□□ 0.25
SPIDR-220ENST00000522900 TFPIP10646 304 aa16.6■□□□□ 0.25
SPIDR-220ENST00000522900 PPP3CBP16298 524 aa16.6■□□□□ 0.25
SPIDR-220ENST00000522900 PSMB1P20618 241 aaKnown RBP16.6■□□□□ 0.25
SPIDR-220ENST00000522900 RPS4Y1P22090 263 aaKnown RBP16.6■□□□□ 0.25
SPIDR-220ENST00000522900 APOBEC1P41238 236 aaKnown RBP16.6■□□□□ 0.25
SPIDR-220ENST00000522900 RASGEF1BQ0VAM2 473 aa16.6■□□□□ 0.25
SPIDR-220ENST00000522900 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.6■□□□□ 0.25
SPIDR-220ENST00000522900 WFDC8Q8IUA0 241 aa16.6■□□□□ 0.25
SPIDR-220ENST00000522900 WFDC11Q8NEX6 87 aa16.6■□□□□ 0.25
SPIDR-220ENST00000522900 ATP6V1G3Q96LB4 118 aa16.6■□□□□ 0.25
SPIDR-220ENST00000522900 OR11A1Q9GZK7 315 aa16.6■□□□□ 0.25
SPIDR-220ENST00000522900 UBTD1Q9HAC8 227 aa16.6■□□□□ 0.25
SPIDR-220ENST00000522900 BCO1Q9HAY6 547 aa16.6■□□□□ 0.25
SPIDR-220ENST00000522900 CHRNA9Q9UGM1 479 aa16.6■□□□□ 0.25
SPIDR-220ENST00000522900 MED13LQ71F56 2210 aa16.6■□□□□ 0.25
SPIDR-220ENST00000522900 SULT2B1O00204 365 aa16.59■□□□□ 0.25
SPIDR-220ENST00000522900 PLAUP00749 431 aa16.59■□□□□ 0.25
SPIDR-220ENST00000522900 ADAP00813 363 aa16.59■□□□□ 0.25
SPIDR-220ENST00000522900 ZCCHC18P0CG32 403 aa16.59■□□□□ 0.25
SPIDR-220ENST00000522900 HOXC12P31275 282 aa16.59■□□□□ 0.25
SPIDR-220ENST00000522900 CRATP43155 626 aa16.59■□□□□ 0.25
SPIDR-220ENST00000522900 IDH3AP50213 366 aa16.59■□□□□ 0.25
SPIDR-220ENST00000522900 ANXA11P50995 505 aaKnown RBP16.59■□□□□ 0.25
SPIDR-220ENST00000522900 PPP2R2AP63151 447 aa16.59■□□□□ 0.25
SPIDR-220ENST00000522900 TXNL4AP83876 142 aaKnown RBP16.59■□□□□ 0.25
SPIDR-220ENST00000522900 ACKR1Q16570 336 aa16.59■□□□□ 0.25
SPIDR-220ENST00000522900 ALKBH2Q6NS38 261 aa16.59■□□□□ 0.25
SPIDR-220ENST00000522900 GRINAQ7Z429 371 aa16.59■□□□□ 0.25
SPIDR-220ENST00000522900 KRTAP1-3Q8IUG1 177 aa16.59■□□□□ 0.25
SPIDR-220ENST00000522900 MIER2Q8N344 545 aa16.59■□□□□ 0.25
SPIDR-220ENST00000522900 WDR60Q8WVS4 1066 aa16.59■□□□□ 0.25
SPIDR-220ENST00000522900 S100PBPQ96BU1 408 aa16.59■□□□□ 0.25
SPIDR-220ENST00000522900 C7orf26Q96N11 449 aa16.59■□□□□ 0.25
SPIDR-220ENST00000522900 EBF4Q9BQW3 602 aa16.59■□□□□ 0.25
SPIDR-220ENST00000522900 TPT1P8Q9HAU6 139 aa16.59■□□□□ 0.25
SPIDR-220ENST00000522900 RLIMQ9NVW2 624 aa16.59■□□□□ 0.25
SPIDR-220ENST00000522900 KLHL9Q9P2J3 617 aa16.59■□□□□ 0.25
SPIDR-220ENST00000522900 PRSS50Q9UI38 385 aa16.59■□□□□ 0.25
SPIDR-220ENST00000522900 FAM234BA2RU67 622 aa16.58■□□□□ 0.24
SPIDR-220ENST00000522900 ANP32DO95626 131 aa16.58■□□□□ 0.24
SPIDR-220ENST00000522900 TFPTP0C1Z6 253 aa16.58■□□□□ 0.24
SPIDR-220ENST00000522900 IL7RP16871 459 aa16.58■□□□□ 0.24
SPIDR-220ENST00000522900 SFRP5Q5T4F7 317 aa16.58■□□□□ 0.24
SPIDR-220ENST00000522900 MRPL2Q5T653 305 aaKnown RBP16.58■□□□□ 0.24
SPIDR-220ENST00000522900 SLC2A7Q6PXP3 512 aa16.58■□□□□ 0.24
SPIDR-220ENST00000522900 MTDHQ86UE4 582 aaKnown RBP16.58■□□□□ 0.24
SPIDR-220ENST00000522900 VRK2Q86Y07 508 aa16.58■□□□□ 0.24
SPIDR-220ENST00000522900 CMIPQ8IY22 773 aa16.58■□□□□ 0.24
SPIDR-220ENST00000522900 STEAP2Q8NFT2 490 aa16.58■□□□□ 0.24
SPIDR-220ENST00000522900 SLC25A43Q8WUT9 341 aaPredicted RBP16.58■□□□□ 0.24
SPIDR-220ENST00000522900 GTF2H4Q92759 462 aa16.58■□□□□ 0.24
SPIDR-220ENST00000522900 ITCHQ96J02 903 aa16.58■□□□□ 0.24
SPIDR-220ENST00000522900 PAIP1Q9H074 479 aaKnown RBP16.58■□□□□ 0.24
SPIDR-220ENST00000522900 OR10A4Q9H209 315 aa16.58■□□□□ 0.24
SPIDR-220ENST00000522900 RMND5AQ9H871 391 aa16.58■□□□□ 0.24
SPIDR-220ENST00000522900 FANCFQ9NPI8 374 aa16.58■□□□□ 0.24
SPIDR-220ENST00000522900 BEX4Q9NWD9 120 aaPredicted RBP16.58■□□□□ 0.24
SPIDR-220ENST00000522900 TMED7-TICAM2A0A0A6YYA0 188 aa16.57■□□□□ 0.24
SPIDR-220ENST00000522900 DBIP07108 87 aaKnown RBP16.57■□□□□ 0.24
SPIDR-220ENST00000522900 OR3A2P47893 321 aa16.57■□□□□ 0.24
SPIDR-220ENST00000522900 DSTNP60981 165 aa16.57■□□□□ 0.24
SPIDR-220ENST00000522900 CSNK2A1P68400 391 aaPredicted RBP16.57■□□□□ 0.24
SPIDR-220ENST00000522900 BEX5Q5H9J7 111 aa16.57■□□□□ 0.24
SPIDR-220ENST00000522900 RPS26P11Q5JNZ5 115 aaPredicted RBP16.57■□□□□ 0.24
SPIDR-220ENST00000522900 C6orf10Q5SRN2 563 aa16.57■□□□□ 0.24
SPIDR-220ENST00000522900 MSANTD1Q6ZTZ1 278 aa16.57■□□□□ 0.24
SPIDR-220ENST00000522900 FUNDC1Q8IVP5 155 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms