RNA–Protein interactions for RNA: ENST00000522121.5

TOP1MT-216, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 874 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-216ENST00000522121 PLAUP00749 431 aa16.39■□□□□ 0.21
TOP1MT-216ENST00000522121 FKBP2P26885 142 aaKnown RBP16.39■□□□□ 0.21
TOP1MT-216ENST00000522121 OR3A2P47893 321 aa16.39■□□□□ 0.21
TOP1MT-216ENST00000522121 UFM1P61960 85 aa16.39■□□□□ 0.21
TOP1MT-216ENST00000522121 KCNJ10P78508 379 aa16.39■□□□□ 0.21
TOP1MT-216ENST00000522121 FUT5Q11128 374 aa16.39■□□□□ 0.21
TOP1MT-216ENST00000522121 CAPRIN1Q14444 709 aaKnown RBP16.39■□□□□ 0.21
TOP1MT-216ENST00000522121 TSC22D1Q15714 1073 aa16.39■□□□□ 0.21
TOP1MT-216ENST00000522121 CLEC9AQ6UXN8 241 aa16.39■□□□□ 0.21
TOP1MT-216ENST00000522121 FRRS1Q6ZNA5 592 aa16.39■□□□□ 0.21
TOP1MT-216ENST00000522121 Q6ZT83 130 aa16.39■□□□□ 0.21
TOP1MT-216ENST00000522121 ARFGAP2Q8N6H7 521 aa16.39■□□□□ 0.21
TOP1MT-216ENST00000522121 ZNF611Q8N823 705 aa16.39■□□□□ 0.21
TOP1MT-216ENST00000522121 FAM71CQ8NEG0 241 aa16.39■□□□□ 0.21
TOP1MT-216ENST00000522121 ZHX1-C8orf76Q96EF9 292 aa16.39■□□□□ 0.21
TOP1MT-216ENST00000522121 TRNT1Q96Q11 434 aaKnown RBP16.39■□□□□ 0.21
TOP1MT-216ENST00000522121 OR52E6Q96RD3 313 aa16.39■□□□□ 0.21
TOP1MT-216ENST00000522121 SMR3AQ99954 134 aa16.39■□□□□ 0.21
TOP1MT-216ENST00000522121 TMEM204Q9BSN7 226 aa16.39■□□□□ 0.21
TOP1MT-216ENST00000522121 ESRP2Q9H6T0 727 aaKnown RBP16.39■□□□□ 0.21
TOP1MT-216ENST00000522121 EXOSC3Q9NQT5 275 aaKnown RBP16.39■□□□□ 0.21
TOP1MT-216ENST00000522121 THAP1Q9NVV9 213 aa16.39■□□□□ 0.21
TOP1MT-216ENST00000522121 LIPT1Q9Y234 373 aa16.39■□□□□ 0.21
TOP1MT-216ENST00000522121 NUP214P35658 2090 aaPredicted RBP16.39■□□□□ 0.21
TOP1MT-216ENST00000522121 ZNF814B7Z6K7 855 aa16.38■□□□□ 0.21
TOP1MT-216ENST00000522121 C9JVG2 144 aa16.38■□□□□ 0.21
TOP1MT-216ENST00000522121 HMGN4O00479 90 aa16.38■□□□□ 0.21
TOP1MT-216ENST00000522121 HDAC3O15379 428 aa16.38■□□□□ 0.21
TOP1MT-216ENST00000522121 PGRP06401 933 aa16.38■□□□□ 0.21
TOP1MT-216ENST00000522121 FESP07332 822 aa16.38■□□□□ 0.21
TOP1MT-216ENST00000522121 ALDOCP09972 364 aaKnown RBP16.38■□□□□ 0.21
TOP1MT-216ENST00000522121 PTH2RP49190 550 aa16.38■□□□□ 0.21
TOP1MT-216ENST00000522121 CHRNEQ04844 493 aa16.38■□□□□ 0.21
TOP1MT-216ENST00000522121 LTBQ06643 244 aa16.38■□□□□ 0.21
TOP1MT-216ENST00000522121 TAB1Q15750 504 aa16.38■□□□□ 0.21
TOP1MT-216ENST00000522121 ZNF621Q6ZSS3 439 aa16.38■□□□□ 0.21
TOP1MT-216ENST00000522121 BHLHA15Q7RTS1 189 aaPredicted RBP16.38■□□□□ 0.21
TOP1MT-216ENST00000522121 GRINAQ7Z429 371 aa16.38■□□□□ 0.21
TOP1MT-216ENST00000522121 GALNT5Q7Z7M9 940 aa16.38■□□□□ 0.21
TOP1MT-216ENST00000522121 MTDHQ86UE4 582 aaKnown RBP16.38■□□□□ 0.21
TOP1MT-216ENST00000522121 RNF130Q86XS8 419 aa16.38■□□□□ 0.21
TOP1MT-216ENST00000522121 CMIPQ8IY22 773 aa16.38■□□□□ 0.21
TOP1MT-216ENST00000522121 ZNF100Q8IYN0 542 aa16.38■□□□□ 0.21
TOP1MT-216ENST00000522121 AKAP1Q92667 903 aaKnown RBP eCLIP16.38■□□□□ 0.21
TOP1MT-216ENST00000522121 ZNF775Q96BV0 537 aaPredicted RBP16.38■□□□□ 0.21
TOP1MT-216ENST00000522121 TEX37Q96LM6 180 aa16.38■□□□□ 0.21
TOP1MT-216ENST00000522121 CCDC106Q9BWC9 280 aa16.38■□□□□ 0.21
TOP1MT-216ENST00000522121 POTEKPQ9BYX7 375 aa16.38■□□□□ 0.21
TOP1MT-216ENST00000522121 CTPS2Q9NRF8 586 aa16.38■□□□□ 0.21
TOP1MT-216ENST00000522121 EMC3Q9P0I2 261 aa16.38■□□□□ 0.21
TOP1MT-216ENST00000522121 CHRNA9Q9UGM1 479 aa16.38■□□□□ 0.21
TOP1MT-216ENST00000522121 ING1Q9UK53 422 aaPredicted RBP16.38■□□□□ 0.21
TOP1MT-216ENST00000522121 RNF115Q9Y4L5 304 aa16.38■□□□□ 0.21
TOP1MT-216ENST00000522121 ZNF469Q96JG9 3925 aaPredicted RBP16.38■□□□□ 0.21
TOP1MT-216ENST00000522121 TMEM120BA0PK00 339 aa16.37■□□□□ 0.21
TOP1MT-216ENST00000522121 SLCO1B7G3V0H7 640 aa16.37■□□□□ 0.21
TOP1MT-216ENST00000522121 H7C1Q1 480 aa16.37■□□□□ 0.21
TOP1MT-216ENST00000522121 CD3EP07766 207 aa16.37■□□□□ 0.21
TOP1MT-216ENST00000522121 EPHA3P29320 983 aa16.37■□□□□ 0.21
TOP1MT-216ENST00000522121 HTR3AP46098 478 aa16.37■□□□□ 0.21
TOP1MT-216ENST00000522121 GNA13Q14344 377 aa16.37■□□□□ 0.21
TOP1MT-216ENST00000522121 ATG16L1Q676U5 607 aa16.37■□□□□ 0.21
TOP1MT-216ENST00000522121 Q71RC1 249 aaPredicted RBP16.37■□□□□ 0.21
TOP1MT-216ENST00000522121 GLB1L3Q8NCI6 653 aaPredicted RBP16.37■□□□□ 0.21
TOP1MT-216ENST00000522121 MGARPQ8TDB4 240 aa16.37■□□□□ 0.21
TOP1MT-216ENST00000522121 ZG16BQ96DA0 208 aa16.37■□□□□ 0.21
TOP1MT-216ENST00000522121 COX4I2Q96KJ9 171 aa16.37■□□□□ 0.21
TOP1MT-216ENST00000522121 ZNF300Q96RE9 604 aaPredicted RBP16.37■□□□□ 0.21
TOP1MT-216ENST00000522121 WDR55Q9H6Y2 383 aaPredicted RBP16.37■□□□□ 0.21
TOP1MT-216ENST00000522121 NIPBLQ6KC79 2804 aaeCLIP16.37■□□□□ 0.21
TOP1MT-216ENST00000522121 GOLGA8QA0A0J9YX86 632 aa16.36■□□□□ 0.21
TOP1MT-216ENST00000522121 GOLGA8OA6NCC3 632 aa16.36■□□□□ 0.21
TOP1MT-216ENST00000522121 GOLGA8NF8WBI6 632 aa16.36■□□□□ 0.21
TOP1MT-216ENST00000522121 CLOCKO15516 846 aa16.36■□□□□ 0.21
TOP1MT-216ENST00000522121 BCAS1O75363 584 aaPredicted RBP16.36■□□□□ 0.21
TOP1MT-216ENST00000522121 CNOT4O95628 575 aaKnown RBP16.36■□□□□ 0.21
TOP1MT-216ENST00000522121 PMS2P2O95744 297 aa16.36■□□□□ 0.21
TOP1MT-216ENST00000522121 KITP10721 976 aa16.36■□□□□ 0.21
TOP1MT-216ENST00000522121 PAX1P15863 534 aa16.36■□□□□ 0.21
TOP1MT-216ENST00000522121 IDH2P48735 452 aaKnown RBP16.36■□□□□ 0.21
TOP1MT-216ENST00000522121 CLK1P49759 484 aaKnown RBP16.36■□□□□ 0.21
TOP1MT-216ENST00000522121 WDR4P57081 412 aaKnown RBP16.36■□□□□ 0.21
TOP1MT-216ENST00000522121 PDK3Q15120 406 aa16.36■□□□□ 0.21
TOP1MT-216ENST00000522121 SYPL1Q16563 259 aa16.36■□□□□ 0.21
TOP1MT-216ENST00000522121 NCMAPQ5T1S8 102 aa16.36■□□□□ 0.21
TOP1MT-216ENST00000522121 NXNQ6DKJ4 435 aa16.36■□□□□ 0.21
TOP1MT-216ENST00000522121 ADAM5Q6NVV9 412 aa16.36■□□□□ 0.21
TOP1MT-216ENST00000522121 LRRC74BQ6ZQY2 392 aa16.36■□□□□ 0.21
TOP1MT-216ENST00000522121 SSX8Q7RTT4 187 aa16.36■□□□□ 0.21
TOP1MT-216ENST00000522121 HMGN2P46Q86SG4 172 aa16.36■□□□□ 0.21
TOP1MT-216ENST00000522121 ANKFN1Q8N957 763 aa16.36■□□□□ 0.21
TOP1MT-216ENST00000522121 RAB3IL1Q8TBN0 382 aa16.36■□□□□ 0.21
TOP1MT-216ENST00000522121 IGFBPL1Q8WX77 278 aa16.36■□□□□ 0.21
TOP1MT-216ENST00000522121 ZNF75CPQ92670 426 aaPredicted RBP16.36■□□□□ 0.21
TOP1MT-216ENST00000522121 PMM1Q92871 262 aa16.36■□□□□ 0.21
TOP1MT-216ENST00000522121 MUCL1Q96DR8 90 aa16.36■□□□□ 0.21
TOP1MT-216ENST00000522121 INPP5KQ9BT40 448 aa16.36■□□□□ 0.21
TOP1MT-216ENST00000522121 MTHFD2LQ9H903 347 aaPredicted RBP16.36■□□□□ 0.21
TOP1MT-216ENST00000522121 NKIRAS1Q9NYS0 192 aa16.36■□□□□ 0.21
TOP1MT-216ENST00000522121 PRSS50Q9UI38 385 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms