RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 CGAP01215 116 aa18.47■□□□□ 0.55
TRIM35-203ENST00000521253 THBS1P07996 1170 aa18.47■□□□□ 0.55
TRIM35-203ENST00000521253 ARAFP10398 606 aa18.47■□□□□ 0.55
TRIM35-203ENST00000521253 GPX2P18283 190 aa18.47■□□□□ 0.55
TRIM35-203ENST00000521253 PEX19P40855 299 aa18.47■□□□□ 0.55
TRIM35-203ENST00000521253 APOBEC1P41238 236 aaKnown RBP18.47■□□□□ 0.55
TRIM35-203ENST00000521253 KIR2DL3P43628 341 aa18.47■□□□□ 0.55
TRIM35-203ENST00000521253 RUNDC3AQ59EK9 446 aa18.47■□□□□ 0.55
TRIM35-203ENST00000521253 FAM214BQ7L5A3 538 aa18.47■□□□□ 0.55
TRIM35-203ENST00000521253 KIF18BQ86Y91 864 aa18.47■□□□□ 0.55
TRIM35-203ENST00000521253 BBS10Q8TAM1 723 aa18.47■□□□□ 0.55
TRIM35-203ENST00000521253 CPNE4Q96A23 557 aaPredicted RBP18.47■□□□□ 0.55
TRIM35-203ENST00000521253 GMPPAQ96IJ6 420 aaPredicted RBP18.47■□□□□ 0.55
TRIM35-203ENST00000521253 ZNF317Q96PQ6 595 aaPredicted RBP18.47■□□□□ 0.55
TRIM35-203ENST00000521253 ZNF559Q9BR84 538 aa18.47■□□□□ 0.55
TRIM35-203ENST00000521253 OPN3Q9H1Y3 402 aaPredicted RBP18.47■□□□□ 0.55
TRIM35-203ENST00000521253 CRIM1Q9NZV1 1036 aa18.47■□□□□ 0.55
TRIM35-203ENST00000521253 CORO2BQ9UQ03 480 aa18.47■□□□□ 0.55
TRIM35-203ENST00000521253 CHST2Q9Y4C5 530 aa18.47■□□□□ 0.55
TRIM35-203ENST00000521253 POLQO75417 2590 aa18.46■□□□□ 0.55
TRIM35-203ENST00000521253 SS18L1O75177 396 aaPredicted RBP18.46■□□□□ 0.55
TRIM35-203ENST00000521253 CPOXP36551 454 aa18.46■□□□□ 0.55
TRIM35-203ENST00000521253 KRTAP10-9P60411 292 aa18.46■□□□□ 0.55
TRIM35-203ENST00000521253 SORDQ00796 357 aa18.46■□□□□ 0.55
TRIM35-203ENST00000521253 EPS8Q12929 822 aa18.46■□□□□ 0.55
TRIM35-203ENST00000521253 LARS2Q15031 903 aaKnown RBP18.46■□□□□ 0.55
TRIM35-203ENST00000521253 RNF220Q5VTB9 566 aa18.46■□□□□ 0.55
TRIM35-203ENST00000521253 ZZZ3Q8IYH5 903 aa18.46■□□□□ 0.55
TRIM35-203ENST00000521253 ZNF440Q8IYI8 595 aa18.46■□□□□ 0.55
TRIM35-203ENST00000521253 CLIP4Q8N3C7 705 aa18.46■□□□□ 0.55
TRIM35-203ENST00000521253 NFKBIDQ8NI38 313 aa18.46■□□□□ 0.55
TRIM35-203ENST00000521253 RNF128Q8TEB7 428 aa18.46■□□□□ 0.55
TRIM35-203ENST00000521253 OR5B2Q96R09 309 aa18.46■□□□□ 0.55
TRIM35-203ENST00000521253 CGREF1Q99674 301 aa18.46■□□□□ 0.55
TRIM35-203ENST00000521253 CACYBPQ9HB71 228 aaKnown RBP18.46■□□□□ 0.55
TRIM35-203ENST00000521253 MCCC2Q9HCC0 563 aa18.46■□□□□ 0.55
TRIM35-203ENST00000521253 SAR1AQ9NR31 198 aa18.46■□□□□ 0.55
TRIM35-203ENST00000521253 KLHL14Q9P2G3 628 aa18.46■□□□□ 0.55
TRIM35-203ENST00000521253 ZNF232Q9UNY5 417 aa18.46■□□□□ 0.55
TRIM35-203ENST00000521253 EMC9Q9Y3B6 208 aa18.46■□□□□ 0.55
TRIM35-203ENST00000521253 CSMD2Q7Z408 3487 aa18.46■□□□□ 0.55
TRIM35-203ENST00000521253 FAAHO00519 579 aa18.45■□□□□ 0.54
TRIM35-203ENST00000521253 GKN3PP0CG01 181 aa18.45■□□□□ 0.54
TRIM35-203ENST00000521253 CD8BP10966 210 aa18.45■□□□□ 0.54
TRIM35-203ENST00000521253 UQCRBP14927 111 aa18.45■□□□□ 0.54
TRIM35-203ENST00000521253 ACAA2P42765 397 aaKnown RBP18.45■□□□□ 0.54
TRIM35-203ENST00000521253 RAC3P60763 192 aa18.45■□□□□ 0.54
TRIM35-203ENST00000521253 CDK6Q00534 326 aa18.45■□□□□ 0.54
TRIM35-203ENST00000521253 NFYCQ13952 458 aa18.45■□□□□ 0.54
TRIM35-203ENST00000521253 ADRM1Q16186 407 aa18.45■□□□□ 0.54
TRIM35-203ENST00000521253 SYT14P1Q58G82 188 aa18.45■□□□□ 0.54
TRIM35-203ENST00000521253 ZNF474Q6S9Z5 364 aaPredicted RBP18.45■□□□□ 0.54
TRIM35-203ENST00000521253 LSRQ86X29 649 aaPredicted RBP18.45■□□□□ 0.54
TRIM35-203ENST00000521253 ADGRG3Q86Y34 549 aa18.45■□□□□ 0.54
TRIM35-203ENST00000521253 ABHD3Q8WU67 409 aa18.45■□□□□ 0.54
TRIM35-203ENST00000521253 SLC25A43Q8WUT9 341 aaPredicted RBP18.45■□□□□ 0.54
TRIM35-203ENST00000521253 REXO5Q96IC2 774 aaKnown RBP18.45■□□□□ 0.54
TRIM35-203ENST00000521253 ANKRD27Q96NW4 1050 aa18.45■□□□□ 0.54
TRIM35-203ENST00000521253 SPATA9Q9BWV2 254 aa18.45■□□□□ 0.54
TRIM35-203ENST00000521253 GLRX2Q9NS18 164 aa18.45■□□□□ 0.54
TRIM35-203ENST00000521253 MRGBPQ9NV56 204 aa18.45■□□□□ 0.54
TRIM35-203ENST00000521253 CHRNA9Q9UGM1 479 aa18.45■□□□□ 0.54
TRIM35-203ENST00000521253 PROCRQ9UNN8 238 aa18.45■□□□□ 0.54
TRIM35-203ENST00000521253 IFT52Q9Y366 437 aa18.45■□□□□ 0.54
TRIM35-203ENST00000521253 PDZD2O15018 2839 aa18.44■□□□□ 0.54
TRIM35-203ENST00000521253 TUBAL3A6NHL2 446 aa18.44■□□□□ 0.54
TRIM35-203ENST00000521253 FBP2O00757 339 aa18.44■□□□□ 0.54
TRIM35-203ENST00000521253 PABPC4LP0CB38 370 aaKnown RBP18.44■□□□□ 0.54
TRIM35-203ENST00000521253 ETS2P15036 469 aa18.44■□□□□ 0.54
TRIM35-203ENST00000521253 ENPP1P22413 925 aa18.44■□□□□ 0.54
TRIM35-203ENST00000521253 SLC1A3P43003 542 aa18.44■□□□□ 0.54
TRIM35-203ENST00000521253 HTR3AP46098 478 aa18.44■□□□□ 0.54
TRIM35-203ENST00000521253 CTBP2P56545 445 aa18.44■□□□□ 0.54
TRIM35-203ENST00000521253 MTPNP58546 118 aa18.44■□□□□ 0.54
TRIM35-203ENST00000521253 KLF10Q13118 480 aa18.44■□□□□ 0.54
TRIM35-203ENST00000521253 SELPLGQ14242 412 aa18.44■□□□□ 0.54
TRIM35-203ENST00000521253 ZSWIM7Q19AV6 140 aa18.44■□□□□ 0.54
TRIM35-203ENST00000521253 ZNF311Q5JNZ3 666 aa18.44■□□□□ 0.54
TRIM35-203ENST00000521253 GTF2IRD2BQ6EKJ0 949 aa18.44■□□□□ 0.54
TRIM35-203ENST00000521253 REEP3Q6NUK4 255 aa18.44■□□□□ 0.54
TRIM35-203ENST00000521253 FCRLAQ7L513 359 aa18.44■□□□□ 0.54
TRIM35-203ENST00000521253 GTF2IRD2Q86UP8 949 aa18.44■□□□□ 0.54
TRIM35-203ENST00000521253 ZNF610Q8N9Z0 462 aa18.44■□□□□ 0.54
TRIM35-203ENST00000521253 OR6K3Q8NGY3 331 aa18.44■□□□□ 0.54
TRIM35-203ENST00000521253 LINC01560Q8TB33 94 aa18.44■□□□□ 0.54
TRIM35-203ENST00000521253 C10orf82Q8WW14 230 aa18.44■□□□□ 0.54
TRIM35-203ENST00000521253 LURAP1Q96LR2 239 aa18.44■□□□□ 0.54
TRIM35-203ENST00000521253 TMEM38AQ9H6F2 299 aa18.44■□□□□ 0.54
TRIM35-203ENST00000521253 OSGIN1Q9UJX0 560 aa18.44■□□□□ 0.54
TRIM35-203ENST00000521253 SPIN1Q9Y657 262 aaPredicted RBP18.44■□□□□ 0.54
TRIM35-203ENST00000521253 TMED7-TICAM2A0A0A6YYA0 188 aa18.43■□□□□ 0.54
TRIM35-203ENST00000521253 IGHV3-15A0A0B4J1V0 119 aa18.43■□□□□ 0.54
TRIM35-203ENST00000521253 TFPIP10646 304 aa18.43■□□□□ 0.54
TRIM35-203ENST00000521253 PRG2P13727 222 aa18.43■□□□□ 0.54
TRIM35-203ENST00000521253 CCNA2P20248 432 aa18.43■□□□□ 0.54
TRIM35-203ENST00000521253 TACR3P29371 465 aa18.43■□□□□ 0.54
TRIM35-203ENST00000521253 DIO1P49895 249 aa18.43■□□□□ 0.54
TRIM35-203ENST00000521253 POLR2HP52434 150 aaKnown RBP18.43■□□□□ 0.54
TRIM35-203ENST00000521253 FAM27E3Q08E93 113 aa18.43■□□□□ 0.54
TRIM35-203ENST00000521253 SCARB2Q14108 478 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms