RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 SPRYD4Q8WW59 207 aaPredicted RBP3.48□□□□□ -1.85
SKP1-208ENST00000521216 RPL3LQ92901 407 aaKnown RBP3.48□□□□□ -1.85
SKP1-208ENST00000521216 RIT2Q99578 217 aa3.48□□□□□ -1.85
SKP1-208ENST00000521216 GAL3ST1Q99999 423 aa3.48□□□□□ -1.85
SKP1-208ENST00000521216 LZTS2Q9BRK4 669 aa3.48□□□□□ -1.85
SKP1-208ENST00000521216 POLR2J2Q9GZM3 115 aaKnown RBP3.48□□□□□ -1.85
SKP1-208ENST00000521216 POLR2J3Q9H1A7 115 aaKnown RBP3.48□□□□□ -1.85
SKP1-208ENST00000521216 SLC35D1Q9NTN3 355 aa3.48□□□□□ -1.85
SKP1-208ENST00000521216 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.48□□□□□ -1.85
SKP1-208ENST00000521216 B3GNT2Q9NY97 397 aa3.48□□□□□ -1.85
SKP1-208ENST00000521216 DCDC2Q9UHG0 476 aa3.48□□□□□ -1.85
SKP1-208ENST00000521216 OR10H1Q9Y4A9 318 aa3.48□□□□□ -1.85
SKP1-208ENST00000521216 A0A1W2PNU3 283 aaPredicted RBP3.47□□□□□ -1.85
SKP1-208ENST00000521216 VSTM2BA6NLU5 285 aa3.47□□□□□ -1.85
SKP1-208ENST00000521216 USP27XA6NNY8 438 aa3.47□□□□□ -1.85
SKP1-208ENST00000521216 TRIM49D1C9J1S8 452 aa3.47□□□□□ -1.85
SKP1-208ENST00000521216 PPIAL4DF5H284 164 aa3.47□□□□□ -1.85
SKP1-208ENST00000521216 PRKYO43930 277 aa3.47□□□□□ -1.85
SKP1-208ENST00000521216 ZNF861PO60384 105 aa3.47□□□□□ -1.85
SKP1-208ENST00000521216 KRT6AP02538 564 aa3.47□□□□□ -1.85
SKP1-208ENST00000521216 TSPY4P0CV99 314 aa3.47□□□□□ -1.85
SKP1-208ENST00000521216 TSPY10P0CW01 314 aa3.47□□□□□ -1.85
SKP1-208ENST00000521216 NT5EP21589 574 aa3.47□□□□□ -1.85
SKP1-208ENST00000521216 ANXA13P27216 316 aa3.47□□□□□ -1.85
SKP1-208ENST00000521216 CD80P33681 288 aa3.47□□□□□ -1.85
SKP1-208ENST00000521216 PRKXP51817 358 aa3.47□□□□□ -1.85
SKP1-208ENST00000521216 PLK1P53350 603 aa3.47□□□□□ -1.85
SKP1-208ENST00000521216 AP3M2P53677 418 aa3.47□□□□□ -1.85
SKP1-208ENST00000521216 APOC4P55056 127 aa3.47□□□□□ -1.85
SKP1-208ENST00000521216 TAF7Q15545 349 aaPredicted RBP3.47□□□□□ -1.85
SKP1-208ENST00000521216 ZSCAN26Q16670 478 aa3.47□□□□□ -1.85
SKP1-208ENST00000521216 ZNF630Q2M218 657 aaPredicted RBP3.47□□□□□ -1.85
SKP1-208ENST00000521216 GGTA1PQ4G0N0 100 aa3.47□□□□□ -1.85
SKP1-208ENST00000521216 IQCF2Q8IXL9 164 aa3.47□□□□□ -1.85
SKP1-208ENST00000521216 FAM184AQ8NB25 1140 aa3.47□□□□□ -1.85
SKP1-208ENST00000521216 C7orf33Q8WU49 177 aa3.47□□□□□ -1.85
SKP1-208ENST00000521216 C17orf50Q8WW18 174 aa3.47□□□□□ -1.85
SKP1-208ENST00000521216 CTNNBL1Q8WYA6 563 aaPredicted RBP3.47□□□□□ -1.85
SKP1-208ENST00000521216 OR1E3Q8WZA6 343 aa3.47□□□□□ -1.85
SKP1-208ENST00000521216 PGLYRP4Q96LB8 373 aa3.47□□□□□ -1.85
SKP1-208ENST00000521216 ZNF396Q96N95 335 aaPredicted RBP3.47□□□□□ -1.85
SKP1-208ENST00000521216 ARHGDIGQ99819 225 aa3.47□□□□□ -1.85
SKP1-208ENST00000521216 EDEM2Q9BV94 578 aa3.47□□□□□ -1.85
SKP1-208ENST00000521216 IQCGQ9H095 443 aaKnown RBP3.47□□□□□ -1.85
SKP1-208ENST00000521216 TMOD2Q9NZR1 351 aa3.47□□□□□ -1.85
SKP1-208ENST00000521216 BTNL2Q9UIR0 455 aa3.47□□□□□ -1.85
SKP1-208ENST00000521216 NEU3Q9UQ49 428 aa3.47□□□□□ -1.85
SKP1-208ENST00000521216 AP1M2Q9Y6Q5 423 aa3.47□□□□□ -1.85
SKP1-208ENST00000521216 HELTA6NFD8 242 aa3.46□□□□□ -1.86
SKP1-208ENST00000521216 BCAS1O75363 584 aaPredicted RBP3.46□□□□□ -1.86
SKP1-208ENST00000521216 ECI2O75521 394 aa3.46□□□□□ -1.86
SKP1-208ENST00000521216 IDH1O75874 414 aaKnown RBP3.46□□□□□ -1.86
SKP1-208ENST00000521216 HEXBP07686 556 aa3.46□□□□□ -1.86
SKP1-208ENST00000521216 DRD5P21918 477 aa3.46□□□□□ -1.86
SKP1-208ENST00000521216 HSPA2P54652 639 aa3.46□□□□□ -1.86
SKP1-208ENST00000521216 ARFRP1Q13795 201 aa3.46□□□□□ -1.86
SKP1-208ENST00000521216 TATDN3Q17R31 274 aa3.46□□□□□ -1.86
SKP1-208ENST00000521216 ZNF530Q6P9A1 599 aaPredicted RBP3.46□□□□□ -1.86
SKP1-208ENST00000521216 IL34Q6ZMJ4 242 aa3.46□□□□□ -1.86
SKP1-208ENST00000521216 SLC38A6Q8IZM9 456 aa3.46□□□□□ -1.86
SKP1-208ENST00000521216 CLDN19Q8N6F1 224 aa3.46□□□□□ -1.86
SKP1-208ENST00000521216 RSPH1Q8WYR4 309 aa3.46□□□□□ -1.86
SKP1-208ENST00000521216 OSTF1Q92882 214 aa3.46□□□□□ -1.86
SKP1-208ENST00000521216 TMEM101Q96IK0 257 aa3.46□□□□□ -1.86
SKP1-208ENST00000521216 RHBGQ9H310 441 aa3.46□□□□□ -1.86
SKP1-208ENST00000521216 ZDHHC11Q9H8X9 412 aa3.46□□□□□ -1.86
SKP1-208ENST00000521216 ELOVL3Q9HB03 270 aa3.46□□□□□ -1.86
SKP1-208ENST00000521216 SH2D2AQ9NP31 389 aa3.46□□□□□ -1.86
SKP1-208ENST00000521216 TREM2Q9NZC2 230 aa3.46□□□□□ -1.86
SKP1-208ENST00000521216 UGT2A1Q9Y4X1 527 aa3.46□□□□□ -1.86
SKP1-208ENST00000521216 PRDM2Q13029 1718 aa3.46□□□□□ -1.86
SKP1-208ENST00000521216 KANK1Q14678 1352 aa3.46□□□□□ -1.86
SKP1-208ENST00000521216 SMARCA2P51531 1590 aa3.46□□□□□ -1.86
SKP1-208ENST00000521216 COL16A1Q07092 1604 aaPredicted RBP3.45□□□□□ -1.86
SKP1-208ENST00000521216 PANO1I0J062 215 aa3.45□□□□□ -1.86
SKP1-208ENST00000521216 RS1O15537 224 aa3.45□□□□□ -1.86
SKP1-208ENST00000521216 TPST2O60704 377 aa3.45□□□□□ -1.86
SKP1-208ENST00000521216 PEX11AO75192 247 aa3.45□□□□□ -1.86
SKP1-208ENST00000521216 SNAPINO95295 136 aa3.45□□□□□ -1.86
SKP1-208ENST00000521216 H2BFMP0C1H6 154 aa3.45□□□□□ -1.86
SKP1-208ENST00000521216 RBMY1CP0DJD4 496 aa3.45□□□□□ -1.86
SKP1-208ENST00000521216 POLR2EP19388 210 aaKnown RBP3.45□□□□□ -1.86
SKP1-208ENST00000521216 UQCRC2P22695 453 aa3.45□□□□□ -1.86
SKP1-208ENST00000521216 FGF9P31371 208 aaPredicted RBP3.45□□□□□ -1.86
SKP1-208ENST00000521216 CA8P35219 290 aa3.45□□□□□ -1.86
SKP1-208ENST00000521216 LEPP41159 167 aa3.45□□□□□ -1.86
SKP1-208ENST00000521216 BIDP55957 195 aa3.45□□□□□ -1.86
SKP1-208ENST00000521216 CSTF1Q05048 431 aaKnown RBP3.45□□□□□ -1.86
SKP1-208ENST00000521216 CAPRIN1Q14444 709 aaKnown RBP3.45□□□□□ -1.86
SKP1-208ENST00000521216 SYPL1Q16563 259 aa3.45□□□□□ -1.86
SKP1-208ENST00000521216 SLC36A3Q495N2 470 aa3.45□□□□□ -1.86
SKP1-208ENST00000521216 DNAJC21Q5F1R6 531 aaKnown RBP3.45□□□□□ -1.86
SKP1-208ENST00000521216 PAGE3Q5JUK9 113 aa3.45□□□□□ -1.86
SKP1-208ENST00000521216 ACOT7LQ6ZUV0 252 aa3.45□□□□□ -1.86
SKP1-208ENST00000521216 Q6ZVH6 145 aa3.45□□□□□ -1.86
SKP1-208ENST00000521216 MYOCDQ8IZQ8 938 aa3.45□□□□□ -1.86
SKP1-208ENST00000521216 PDCL2Q8N4E4 241 aa3.45□□□□□ -1.86
SKP1-208ENST00000521216 DHRSXQ8N5I4 330 aa3.45□□□□□ -1.86
SKP1-208ENST00000521216 CCDC71LQ8N9Z2 235 aa3.45□□□□□ -1.86
SKP1-208ENST00000521216 OR10A7Q8NGE5 316 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms