RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 PLSCR2Q9NRY7 297 aa13.86□□□□□ -0.19
LSM1-203ENST00000520755 MAN2C1Q9NTJ4 1040 aa13.86□□□□□ -0.19
LSM1-203ENST00000520755 ARMC1Q9NVT9 282 aa13.86□□□□□ -0.19
LSM1-203ENST00000520755 VNN3Q9NY84 501 aa13.86□□□□□ -0.19
LSM1-203ENST00000520755 SLC6A5Q9Y345 797 aa13.86□□□□□ -0.19
LSM1-203ENST00000520755 A0A0B4J2E0 115 aa13.85□□□□□ -0.19
LSM1-203ENST00000520755 A0A1B0GX12 115 aa13.85□□□□□ -0.19
LSM1-203ENST00000520755 HCN1O60741 890 aa13.85□□□□□ -0.19
LSM1-203ENST00000520755 PLA2G2AP14555 144 aa13.85□□□□□ -0.19
LSM1-203ENST00000520755 PRKCAP17252 672 aa13.85□□□□□ -0.19
LSM1-203ENST00000520755 PGCP20142 388 aa13.85□□□□□ -0.19
LSM1-203ENST00000520755 GNLYP22749 145 aa13.85□□□□□ -0.19
LSM1-203ENST00000520755 UQCRFS1P47985 274 aa13.85□□□□□ -0.19
LSM1-203ENST00000520755 IDH2P48735 452 aaKnown RBP13.85□□□□□ -0.19
LSM1-203ENST00000520755 ZNF41P51814 821 aaPredicted RBP13.85□□□□□ -0.19
LSM1-203ENST00000520755 SESN3P58005 492 aa13.85□□□□□ -0.19
LSM1-203ENST00000520755 RBPJQ06330 500 aa13.85□□□□□ -0.19
LSM1-203ENST00000520755 PIN1Q13526 163 aaPredicted RBP13.85□□□□□ -0.19
LSM1-203ENST00000520755 OR1Q1Q15612 314 aa13.85□□□□□ -0.19
LSM1-203ENST00000520755 TMEM44Q2T9K0 475 aa13.85□□□□□ -0.19
LSM1-203ENST00000520755 RAET1LQ5VY80 246 aa13.85□□□□□ -0.19
LSM1-203ENST00000520755 HMBOX1Q6NT76 420 aa13.85□□□□□ -0.19
LSM1-203ENST00000520755 ARHGAP11AQ6P4F7 1023 aa13.85□□□□□ -0.19
LSM1-203ENST00000520755 WDR88Q6ZMY6 472 aa13.85□□□□□ -0.19
LSM1-203ENST00000520755 PLEKHM3Q6ZWE6 761 aa13.85□□□□□ -0.19
LSM1-203ENST00000520755 OFCC1Q8IZS5 231 aa13.85□□□□□ -0.19
LSM1-203ENST00000520755 LILRA2Q8N149 483 aa13.85□□□□□ -0.19
LSM1-203ENST00000520755 OR5M1Q8NGP8 315 aa13.85□□□□□ -0.19
LSM1-203ENST00000520755 NEIL3Q8TAT5 605 aa13.85□□□□□ -0.19
LSM1-203ENST00000520755 ADAMTS16Q8TE57 1224 aa13.85□□□□□ -0.19
LSM1-203ENST00000520755 C3orf49Q96BT1 292 aa13.85□□□□□ -0.19
LSM1-203ENST00000520755 DHRS1Q96LJ7 313 aa13.85□□□□□ -0.19
LSM1-203ENST00000520755 S100A14Q9HCY8 104 aa13.85□□□□□ -0.19
LSM1-203ENST00000520755 SPRR3Q9UBC9 169 aa13.85□□□□□ -0.19
LSM1-203ENST00000520755 RHCGQ9UBD6 479 aa13.85□□□□□ -0.19
LSM1-203ENST00000520755 TNFRSF10DQ9UBN6 386 aa13.85□□□□□ -0.19
LSM1-203ENST00000520755 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.84□□□□□ -0.19
LSM1-203ENST00000520755 A0A1B0GVC2 190 aa13.84□□□□□ -0.19
LSM1-203ENST00000520755 NPIPA2E9PIF3 369 aa13.84□□□□□ -0.19
LSM1-203ENST00000520755 NPIPA3F8WFD2 350 aa13.84□□□□□ -0.19
LSM1-203ENST00000520755 AQP7O14520 342 aa13.84□□□□□ -0.19
LSM1-203ENST00000520755 SUSD5O60279 629 aa13.84□□□□□ -0.19
LSM1-203ENST00000520755 ZIC3O60481 467 aa13.84□□□□□ -0.19
LSM1-203ENST00000520755 OR5F1O95221 314 aa13.84□□□□□ -0.19
LSM1-203ENST00000520755 ABOP16442 354 aa13.84□□□□□ -0.19
LSM1-203ENST00000520755 RHCEP18577 417 aa13.84□□□□□ -0.19
LSM1-203ENST00000520755 PTGS2P35354 604 aa13.84□□□□□ -0.19
LSM1-203ENST00000520755 GCKP35557 465 aa13.84□□□□□ -0.19
LSM1-203ENST00000520755 B3GALT5-AS1P59052 145 aa13.84□□□□□ -0.19
LSM1-203ENST00000520755 SLC25A53Q5H9E4 307 aa13.84□□□□□ -0.19
LSM1-203ENST00000520755 ZNF613Q6PF04 617 aa13.84□□□□□ -0.19
LSM1-203ENST00000520755 GDF7Q7Z4P5 450 aa13.84□□□□□ -0.19
LSM1-203ENST00000520755 FGD2Q7Z6J4 655 aa13.84□□□□□ -0.19
LSM1-203ENST00000520755 CADM2Q8N3J6 435 aa13.84□□□□□ -0.19
LSM1-203ENST00000520755 ST8SIA1Q92185 356 aa13.84□□□□□ -0.19
LSM1-203ENST00000520755 SFXN2Q96NB2 322 aa13.84□□□□□ -0.19
LSM1-203ENST00000520755 PRSS27Q9BQR3 290 aa13.84□□□□□ -0.19
LSM1-203ENST00000520755 TRIM2Q9C040 744 aa13.84□□□□□ -0.19
LSM1-203ENST00000520755 ADAM19Q9H013 955 aa13.84□□□□□ -0.19
LSM1-203ENST00000520755 ACER3Q9NUN7 267 aa13.84□□□□□ -0.19
LSM1-203ENST00000520755 MRPS18CQ9Y3D5 142 aaKnown RBP13.84□□□□□ -0.19
LSM1-203ENST00000520755 AP4S1Q9Y587 144 aa13.84□□□□□ -0.19
LSM1-203ENST00000520755 ZNF462Q96JM2 2506 aa13.83□□□□□ -0.2
LSM1-203ENST00000520755 A0A087WZY1 265 aa13.83□□□□□ -0.2
LSM1-203ENST00000520755 C7orf72A4D263 438 aa13.83□□□□□ -0.2
LSM1-203ENST00000520755 TRAPPC13A5PLN9 417 aa13.83□□□□□ -0.2
LSM1-203ENST00000520755 IL11P20809 199 aa13.83□□□□□ -0.2
LSM1-203ENST00000520755 SLC1A3P43003 542 aa13.83□□□□□ -0.2
LSM1-203ENST00000520755 CDH12P55289 794 aa13.83□□□□□ -0.2
LSM1-203ENST00000520755 TAS2R41P59536 307 aa13.83□□□□□ -0.2
LSM1-203ENST00000520755 EIF2S3LQ2VIR3 472 aaKnown RBP13.83□□□□□ -0.2
LSM1-203ENST00000520755 WBP2NLQ6ICG8 309 aa13.83□□□□□ -0.2
LSM1-203ENST00000520755 ZFP1Q6P2D0 407 aa13.83□□□□□ -0.2
LSM1-203ENST00000520755 ATG4DQ86TL0 474 aaPredicted RBP13.83□□□□□ -0.2
LSM1-203ENST00000520755 CHERPQ8IWX8 916 aaKnown RBP13.83□□□□□ -0.2
LSM1-203ENST00000520755 PIK3C3Q8NEB9 887 aa13.83□□□□□ -0.2
LSM1-203ENST00000520755 ZNF563Q8TA94 476 aa13.83□□□□□ -0.2
LSM1-203ENST00000520755 SLC41A3Q96GZ6 507 aa13.83□□□□□ -0.2
LSM1-203ENST00000520755 PIP5K1AQ99755 562 aa13.83□□□□□ -0.2
LSM1-203ENST00000520755 FUZQ9BT04 418 aa13.83□□□□□ -0.2
LSM1-203ENST00000520755 POLR2J2Q9GZM3 115 aaKnown RBP13.83□□□□□ -0.2
LSM1-203ENST00000520755 POLR2J3Q9H1A7 115 aaKnown RBP13.83□□□□□ -0.2
LSM1-203ENST00000520755 RIMS3Q9UJD0 308 aa13.83□□□□□ -0.2
LSM1-203ENST00000520755 SLC7A7Q9UM01 511 aa13.83□□□□□ -0.2
LSM1-203ENST00000520755 OSGIN2Q9Y236 505 aa13.83□□□□□ -0.2
LSM1-203ENST00000520755 TESMINQ9Y4I5 508 aa13.83□□□□□ -0.2
LSM1-203ENST00000520755 CHP2O43745 196 aa13.82□□□□□ -0.2
LSM1-203ENST00000520755 EFNA2O43921 213 aa13.82□□□□□ -0.2
LSM1-203ENST00000520755 SLC19A2O60779 497 aa13.82□□□□□ -0.2
LSM1-203ENST00000520755 TPOP07202 933 aa13.82□□□□□ -0.2
LSM1-203ENST00000520755 GP1BBP13224 206 aa13.82□□□□□ -0.2
LSM1-203ENST00000520755 UQCRBP14927 111 aa13.82□□□□□ -0.2
LSM1-203ENST00000520755 ITGA2P17301 1181 aa13.82□□□□□ -0.2
LSM1-203ENST00000520755 HOXB6P17509 224 aaKnown RBP13.82□□□□□ -0.2
LSM1-203ENST00000520755 BMP7P18075 431 aa13.82□□□□□ -0.2
LSM1-203ENST00000520755 PTNP21246 168 aa13.82□□□□□ -0.2
LSM1-203ENST00000520755 TACR3P29371 465 aa13.82□□□□□ -0.2
LSM1-203ENST00000520755 RRM2P31350 389 aa13.82□□□□□ -0.2
LSM1-203ENST00000520755 LIMS1P48059 325 aa13.82□□□□□ -0.2
LSM1-203ENST00000520755 SPIBQ01892 262 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms