RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 OSBPL11Q9BXB4 747 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 GON7Q9BXV9 100 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 SHCBP1LQ9BZQ2 653 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 SLC39A8Q9C0K1 460 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 C20orf27Q9GZN8 174 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 LHX5Q9H2C1 402 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 Q9H521 79 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 ZNF385DQ9H6B1 395 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 DHX33Q9H6R0 707 aaKnown RBP2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 XPNPEP1Q9NQW7 623 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 PXMP2Q9NR77 195 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 PNPLA3Q9NST1 481 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 GDAP2Q9NXN4 497 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 GTSE1Q9NYZ3 720 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 CNIH4Q9P003 139 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 SLC17A7Q9P2U7 560 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 EPS15L1Q9UBC2 864 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 ENPP5Q9UJA9 477 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 APPL1Q9UKG1 709 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 EIF3LQ9Y262 564 aaKnown RBP2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 CFL2Q9Y281 166 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 NAALAD2Q9Y3Q0 740 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 A0A087WXM4 84 aa2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 IGKV6-21A0A0C4DH24 114 aa2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 TCRBV3S1A0A5B6 114 aa2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 BCLAF3A2AJT9 711 aaKnown RBP2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 SHISA7A6NL88 538 aa2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 ARHGEF33A8MVX0 844 aa2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 PDHXO00330 501 aa2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 TRDMT1O14717 391 aaKnown RBP2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 MCF2LO15068 1137 aa2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 CLDN3O15551 220 aa2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 SYT7O43581 403 aa2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 CHMP2AO43633 222 aa2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 PI15O43692 258 aa2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 ZNF254O75437 659 aa2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 KCNK2O95069 426 aa2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 BAG2O95816 211 aa2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 OLFM2O95897 454 aa2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 KRT6AP02538 564 aa2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 KRT6BP04259 564 aa2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 CALB1P05937 261 aa2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 ADORA3P0DMS8 318 aa2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 ICAM2P13598 275 aa2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 CCDC130P13994 396 aa2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 CD1EP15812 388 aa2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 GATA1P15976 413 aaPredicted RBP2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 CFL1P23528 166 aaKnown RBP2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 IL32P24001 234 aa2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 IL4RP24394 825 aa2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 RPS12P25398 132 aaKnown RBP2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 CCND2P30279 289 aa2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 POLR2IP36954 125 aaKnown RBP2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 SLC26A3P40879 764 aa2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 PTGER3P43115 390 aa2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 NSFP46459 744 aaKnown RBP2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 TUFMP49411 452 aaKnown RBP2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 KHKP50053 298 aa2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 NDST1P52848 882 aa2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 AP2S1P53680 142 aaPredicted RBP2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 IST1P53990 364 aa2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 KRTAP10-3P60369 221 aa2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 RPS6P62753 249 aaKnown RBP2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 PRKCEQ02156 737 aa2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 FCHO2Q0JRZ9 810 aa2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 BST1Q10588 318 aa2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 PMS2P3Q13401 168 aa2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 AQP6Q13520 282 aa2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 CUL2Q13617 745 aa2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 PIGHQ14442 188 aaPredicted RBP2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 TMED2Q15363 201 aa2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 TRIP13Q15645 432 aaPredicted RBP2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 STXBP2Q15833 593 aa2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 LRRC36Q1X8D7 754 aa2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 KLHL38Q2WGJ6 581 aa2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 PPM1LQ5SGD2 360 aa2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 LCE1FQ5T754 118 aa2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 LIN9Q5TKA1 542 aa2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 LYPLAL1Q5VWZ2 237 aa2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 KDM4DQ6B0I6 523 aa2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 SIGLEC15Q6ZMC9 328 aa2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 PLEKHG7Q6ZR37 379 aa2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 GPRIN3Q6ZVF9 776 aa2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 Q71RC1 249 aaPredicted RBP2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 HPS6Q86YV9 775 aa2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 C4orf33Q8N1A6 199 aa2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 ABHD12Q8N2K0 398 aa2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 PARP8Q8N3A8 854 aa2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 SPEM1Q8N4L4 309 aa2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 ANKFN1Q8N957 763 aa2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 TCP10LQ8TDR4 215 aa2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 C1orf54Q8WWF1 131 aa2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 ZNF606Q8WXB4 792 aa2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 ANKRD9Q96BM1 317 aaPredicted RBP2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 PDLIM5Q96HC4 596 aaKnown RBP2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 SERAC1Q96JX3 654 aa2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 C9orf72Q96LT7 481 aa2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 RPRD1AQ96P16 312 aaPredicted RBP2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 ZNF559Q9BR84 538 aa2.67□□□□□ -1.98
HMGB1P41-201ENST00000520234 TMEM121Q9BTD3 319 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms