RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 SLC7A7Q9UM01 511 aa16.1■□□□□ 0.17
SDC2-205ENST00000520233 TRGV5A0A0B4J1U4 118 aa16.09■□□□□ 0.17
SDC2-205ENST00000520233 OR2M5A3KFT3 312 aa16.09■□□□□ 0.17
SDC2-205ENST00000520233 SHISA8B8ZZ34 492 aa16.09■□□□□ 0.17
SDC2-205ENST00000520233 NPIPA5E9PKD4 350 aa16.09■□□□□ 0.17
SDC2-205ENST00000520233 HNRNPRO43390 633 aaKnown RBP16.09■□□□□ 0.17
SDC2-205ENST00000520233 SUSD5O60279 629 aa16.09■□□□□ 0.17
SDC2-205ENST00000520233 PNMTP11086 282 aa16.09■□□□□ 0.17
SDC2-205ENST00000520233 CHMP24386 653 aa16.09■□□□□ 0.17
SDC2-205ENST00000520233 CXCR1P25024 350 aa16.09■□□□□ 0.17
SDC2-205ENST00000520233 GCKP35557 465 aa16.09■□□□□ 0.17
SDC2-205ENST00000520233 MAP2K6P52564 334 aa16.09■□□□□ 0.17
SDC2-205ENST00000520233 SMIM11AP58511 58 aa16.09■□□□□ 0.17
SDC2-205ENST00000520233 ELF3P78545 371 aaPredicted RBP16.09■□□□□ 0.17
SDC2-205ENST00000520233 TRILQ7L0X0 811 aa16.09■□□□□ 0.17
SDC2-205ENST00000520233 ADGRG3Q86Y34 549 aa16.09■□□□□ 0.17
SDC2-205ENST00000520233 OR5M1Q8NGP8 315 aa16.09■□□□□ 0.17
SDC2-205ENST00000520233 NEIL3Q8TAT5 605 aa16.09■□□□□ 0.17
SDC2-205ENST00000520233 SNRNP40Q96DI7 357 aaKnown RBP16.09■□□□□ 0.17
SDC2-205ENST00000520233 MPP4Q96JB8 637 aa16.09■□□□□ 0.17
SDC2-205ENST00000520233 SFXN2Q96NB2 322 aa16.09■□□□□ 0.17
SDC2-205ENST00000520233 LDAHQ9H6V9 325 aa16.09■□□□□ 0.17
SDC2-205ENST00000520233 NMNAT1Q9HAN9 279 aaPredicted RBP16.09■□□□□ 0.17
SDC2-205ENST00000520233 SERINC1Q9NRX5 453 aa16.09■□□□□ 0.17
SDC2-205ENST00000520233 PLSCR2Q9NRY7 297 aa16.09■□□□□ 0.17
SDC2-205ENST00000520233 RHCGQ9UBD6 479 aa16.09■□□□□ 0.17
SDC2-205ENST00000520233 NPIPA1Q9UND3 350 aa16.09■□□□□ 0.17
SDC2-205ENST00000520233 LIPGQ9Y5X9 500 aa16.09■□□□□ 0.17
SDC2-205ENST00000520233 PKD1L2Q7Z442 2459 aa16.09■□□□□ 0.17
SDC2-205ENST00000520233 HEATR5AQ86XA9 2040 aa16.09■□□□□ 0.17
SDC2-205ENST00000520233 PCNX3Q9H6A9 2034 aa16.08■□□□□ 0.16
SDC2-205ENST00000520233 A0A087WUJ7 227 aa16.08■□□□□ 0.16
SDC2-205ENST00000520233 TMED7-TICAM2A0A0A6YYA0 188 aa16.08■□□□□ 0.16
SDC2-205ENST00000520233 A0A1B0GVC2 190 aa16.08■□□□□ 0.16
SDC2-205ENST00000520233 ELOA3DA6NLF2 546 aaPredicted RBP16.08■□□□□ 0.16
SDC2-205ENST00000520233 EFNA2O43921 213 aa16.08■□□□□ 0.16
SDC2-205ENST00000520233 TIPRLO75663 272 aa16.08■□□□□ 0.16
SDC2-205ENST00000520233 CST1P01037 141 aa16.08■□□□□ 0.16
SDC2-205ENST00000520233 H1F0P07305 194 aaKnown RBP16.08■□□□□ 0.16
SDC2-205ENST00000520233 NFATC3Q12968 1075 aa16.08■□□□□ 0.16
SDC2-205ENST00000520233 TRAM2Q15035 370 aa16.08■□□□□ 0.16
SDC2-205ENST00000520233 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.08■□□□□ 0.16
SDC2-205ENST00000520233 ELOA3BQ3SY89 546 aa16.08■□□□□ 0.16
SDC2-205ENST00000520233 KRTCAP3Q53RY4 240 aa16.08■□□□□ 0.16
SDC2-205ENST00000520233 OR2T5Q6IEZ7 315 aa16.08■□□□□ 0.16
SDC2-205ENST00000520233 AAGABQ6PD74 315 aa16.08■□□□□ 0.16
SDC2-205ENST00000520233 LINC00114Q6XXX2 140 aa16.08■□□□□ 0.16
SDC2-205ENST00000520233 ELOA3Q8NG57 546 aa16.08■□□□□ 0.16
SDC2-205ENST00000520233 OR2T29Q8NH02 315 aa16.08■□□□□ 0.16
SDC2-205ENST00000520233 RNF217Q8TC41 542 aa16.08■□□□□ 0.16
SDC2-205ENST00000520233 STMN2Q93045 179 aa16.08■□□□□ 0.16
SDC2-205ENST00000520233 DHRS1Q96LJ7 313 aa16.08■□□□□ 0.16
SDC2-205ENST00000520233 GPR137Q96N19 417 aa16.08■□□□□ 0.16
SDC2-205ENST00000520233 BARD1Q99728 777 aaKnown RBP16.08■□□□□ 0.16
SDC2-205ENST00000520233 PRSS27Q9BQR3 290 aa16.08■□□□□ 0.16
SDC2-205ENST00000520233 TSPAN10Q9H1Z9 355 aaPredicted RBP16.08■□□□□ 0.16
SDC2-205ENST00000520233 ANKRD19PQ9H560 264 aa16.08■□□□□ 0.16
SDC2-205ENST00000520233 S100A14Q9HCY8 104 aa16.08■□□□□ 0.16
SDC2-205ENST00000520233 AGPAT4Q9NRZ5 378 aa16.08■□□□□ 0.16
SDC2-205ENST00000520233 CHRNA9Q9UGM1 479 aa16.08■□□□□ 0.16
SDC2-205ENST00000520233 SLC6A5Q9Y345 797 aa16.08■□□□□ 0.16
SDC2-205ENST00000520233 TMED7Q9Y3B3 224 aa16.08■□□□□ 0.16
SDC2-205ENST00000520233 ZNF337Q9Y3M9 751 aa16.08■□□□□ 0.16
SDC2-205ENST00000520233 TESMINQ9Y4I5 508 aa16.08■□□□□ 0.16
SDC2-205ENST00000520233 SPIN1Q9Y657 262 aaPredicted RBP16.08■□□□□ 0.16
SDC2-205ENST00000520233 NCKAP5O14513 1909 aa16.07■□□□□ 0.16
SDC2-205ENST00000520233 A0A1W2PRQ8 180 aa16.07■□□□□ 0.16
SDC2-205ENST00000520233 TMEM72A0PK05 275 aa16.07■□□□□ 0.16
SDC2-205ENST00000520233 TTLL8A6PVC2 850 aa16.07■□□□□ 0.16
SDC2-205ENST00000520233 H3BNX3 289 aa16.07■□□□□ 0.16
SDC2-205ENST00000520233 ADAMDEC1O15204 470 aa16.07■□□□□ 0.16
SDC2-205ENST00000520233 KRT36O76013 467 aa16.07■□□□□ 0.16
SDC2-205ENST00000520233 ACTL6AO96019 429 aa16.07■□□□□ 0.16
SDC2-205ENST00000520233 FCGR1AP12314 374 aa16.07■□□□□ 0.16
SDC2-205ENST00000520233 FKBP2P26885 142 aaKnown RBP16.07■□□□□ 0.16
SDC2-205ENST00000520233 RRM2P31350 389 aa16.07■□□□□ 0.16
SDC2-205ENST00000520233 RAC1P63000 192 aa16.07■□□□□ 0.16
SDC2-205ENST00000520233 SPIBQ01892 262 aa16.07■□□□□ 0.16
SDC2-205ENST00000520233 SELENBP1Q13228 472 aa16.07■□□□□ 0.16
SDC2-205ENST00000520233 DGCR6Q14129 220 aa16.07■□□□□ 0.16
SDC2-205ENST00000520233 NHSL2Q5HYW2 709 aa16.07■□□□□ 0.16
SDC2-205ENST00000520233 C3orf33Q6P1S2 294 aa16.07■□□□□ 0.16
SDC2-205ENST00000520233 POMZP3Q6PJE2 187 aa16.07■□□□□ 0.16
SDC2-205ENST00000520233 EXO5Q9H790 373 aa16.07■□□□□ 0.16
SDC2-205ENST00000520233 MAN2C1Q9NTJ4 1040 aa16.07■□□□□ 0.16
SDC2-205ENST00000520233 ASF1BQ9NVP2 202 aa16.07■□□□□ 0.16
SDC2-205ENST00000520233 AP4B1Q9Y6B7 739 aa16.07■□□□□ 0.16
SDC2-205ENST00000520233 EPG5Q9HCE0 2579 aa16.07■□□□□ 0.16
SDC2-205ENST00000520233 USP24Q9UPU5 2620 aa16.06■□□□□ 0.16
SDC2-205ENST00000520233 H0YHG0 523 aa16.06■□□□□ 0.16
SDC2-205ENST00000520233 AQP7O14520 342 aa16.06■□□□□ 0.16
SDC2-205ENST00000520233 ZNF208O43345 1280 aa16.06■□□□□ 0.16
SDC2-205ENST00000520233 WISP2O76076 250 aa16.06■□□□□ 0.16
SDC2-205ENST00000520233 GADD45GO95257 159 aa16.06■□□□□ 0.16
SDC2-205ENST00000520233 BMP7P18075 431 aa16.06■□□□□ 0.16
SDC2-205ENST00000520233 IL11P20809 199 aa16.06■□□□□ 0.16
SDC2-205ENST00000520233 FUT4P22083 530 aa16.06■□□□□ 0.16
SDC2-205ENST00000520233 FASP25445 335 aa16.06■□□□□ 0.16
SDC2-205ENST00000520233 RBM34P42696 430 aaKnown RBP16.06■□□□□ 0.16
SDC2-205ENST00000520233 PRR30Q53SZ7 412 aaPredicted RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms