RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 PRMT9Q6P2P2 845 aa-2.16□□□□□ -2.76
RNU6-539P-201ENST00000516665 ATRAIDQ6UW56 229 aa-2.16□□□□□ -2.76
RNU6-539P-201ENST00000516665 BTNL8Q6UX41 500 aa-2.16□□□□□ -2.76
RNU6-539P-201ENST00000516665 SERPINA9Q86WD7 417 aa-2.16□□□□□ -2.76
RNU6-539P-201ENST00000516665 CCAR1Q8IX12 1150 aaKnown RBP-2.16□□□□□ -2.76
RNU6-539P-201ENST00000516665 GUF1Q8N442 669 aaKnown RBP-2.16□□□□□ -2.76
RNU6-539P-201ENST00000516665 SNX31Q8N9S9 440 aa-2.16□□□□□ -2.76
RNU6-539P-201ENST00000516665 SMYD1Q8NB12 490 aa-2.16□□□□□ -2.76
RNU6-539P-201ENST00000516665 C19orf18Q8NEA5 215 aa-2.16□□□□□ -2.76
RNU6-539P-201ENST00000516665 CCDC54Q8NEL0 328 aa-2.16□□□□□ -2.76
RNU6-539P-201ENST00000516665 STEAP2Q8NFT2 490 aa-2.16□□□□□ -2.76
RNU6-539P-201ENST00000516665 LILRB4Q8NHJ6 448 aa-2.16□□□□□ -2.76
RNU6-539P-201ENST00000516665 DCANP1Q8TF63 244 aa-2.16□□□□□ -2.76
RNU6-539P-201ENST00000516665 GRK7Q8WTQ7 553 aa-2.16□□□□□ -2.76
RNU6-539P-201ENST00000516665 SHC3Q92529 594 aa-2.16□□□□□ -2.76
RNU6-539P-201ENST00000516665 ART4Q93070 314 aa-2.16□□□□□ -2.76
RNU6-539P-201ENST00000516665 HVCN1Q96D96 273 aa-2.16□□□□□ -2.76
RNU6-539P-201ENST00000516665 DNAJC19Q96DA6 116 aa-2.16□□□□□ -2.76
RNU6-539P-201ENST00000516665 FCRL1Q96LA6 429 aa-2.16□□□□□ -2.76
RNU6-539P-201ENST00000516665 ZFP3Q96NJ6 502 aa-2.16□□□□□ -2.76
RNU6-539P-201ENST00000516665 TSSK2Q96PF2 358 aa-2.16□□□□□ -2.76
RNU6-539P-201ENST00000516665 TBL1XR1Q9BZK7 514 aa-2.16□□□□□ -2.76
RNU6-539P-201ENST00000516665 GOLPH3LQ9H4A5 285 aa-2.16□□□□□ -2.76
RNU6-539P-201ENST00000516665 TUBA4BQ9H853 241 aa-2.16□□□□□ -2.76
RNU6-539P-201ENST00000516665 RNPEPL1Q9HAU8 725 aa-2.16□□□□□ -2.76
RNU6-539P-201ENST00000516665 PLCB1Q9NQ66 1216 aa-2.16□□□□□ -2.76
RNU6-539P-201ENST00000516665 PIH1D3Q9NQM4 214 aaKnown RBP-2.16□□□□□ -2.76
RNU6-539P-201ENST00000516665 SEPT11Q9NVA2 429 aaKnown RBP-2.16□□□□□ -2.76
RNU6-539P-201ENST00000516665 ALG6Q9Y672 507 aa-2.16□□□□□ -2.76
RNU6-539P-201ENST00000516665 CNTRLQ7Z7A1 2325 aa-2.16□□□□□ -2.76
RNU6-539P-201ENST00000516665 MAP1AP78559 2803 aaPredicted RBP-2.16□□□□□ -2.76
RNU6-539P-201ENST00000516665 ABCA12Q86UK0 2595 aa-2.16□□□□□ -2.76
RNU6-539P-201ENST00000516665 NBEAL1Q6ZS30 2694 aa-2.16□□□□□ -2.76
RNU6-539P-201ENST00000516665 ADAMTS13Q76LX8 1427 aa-2.17□□□□□ -2.76
RNU6-539P-201ENST00000516665 SETD1AO15047 1707 aaKnown RBP-2.17□□□□□ -2.76
RNU6-539P-201ENST00000516665 LPAP08519 4548 aa-2.17□□□□□ -2.76
RNU6-539P-201ENST00000516665 NPIPA5A0A0B4J1W7 369 aa-2.17□□□□□ -2.76
RNU6-539P-201ENST00000516665 CENPVL3A0A0U1RRI6 287 aa-2.17□□□□□ -2.76
RNU6-539P-201ENST00000516665 ATP6AP2A0A1C7CYW4 349 aa-2.17□□□□□ -2.76
RNU6-539P-201ENST00000516665 TPST2O60704 377 aa-2.17□□□□□ -2.76
RNU6-539P-201ENST00000516665 CXCL14O95715 111 aa-2.17□□□□□ -2.76
RNU6-539P-201ENST00000516665 SETSIPP0DME0 302 aa-2.17□□□□□ -2.76
RNU6-539P-201ENST00000516665 HSPA1AP0DMV8 641 aaKnown RBP-2.17□□□□□ -2.76
RNU6-539P-201ENST00000516665 HSPA1BP0DMV9 641 aaKnown RBP-2.17□□□□□ -2.76
RNU6-539P-201ENST00000516665 IL9P15248 144 aa-2.17□□□□□ -2.76
RNU6-539P-201ENST00000516665 CNR1P21554 472 aa-2.17□□□□□ -2.76
RNU6-539P-201ENST00000516665 DHPSP49366 369 aaPredicted RBP-2.17□□□□□ -2.76
RNU6-539P-201ENST00000516665 ARFIP1P53367 373 aa-2.17□□□□□ -2.76
RNU6-539P-201ENST00000516665 HOXC5Q00444 222 aa-2.17□□□□□ -2.76
RNU6-539P-201ENST00000516665 MC1RQ01726 317 aa-2.17□□□□□ -2.76
RNU6-539P-201ENST00000516665 CD164Q04900 197 aa-2.17□□□□□ -2.76
RNU6-539P-201ENST00000516665 BIKQ13323 160 aa-2.17□□□□□ -2.76
RNU6-539P-201ENST00000516665 MEF2DQ14814 521 aa-2.17□□□□□ -2.76
RNU6-539P-201ENST00000516665 CEBPEQ15744 281 aa-2.17□□□□□ -2.76
RNU6-539P-201ENST00000516665 SLC39A12Q504Y0 691 aa-2.17□□□□□ -2.76
RNU6-539P-201ENST00000516665 SMUG1Q53HV7 270 aa-2.17□□□□□ -2.76
RNU6-539P-201ENST00000516665 IGSF11Q5DX21 431 aa-2.17□□□□□ -2.76
RNU6-539P-201ENST00000516665 TCHHL1Q5QJ38 904 aaPredicted RBP-2.17□□□□□ -2.76
RNU6-539P-201ENST00000516665 FAM222AQ5U5X8 452 aa-2.17□□□□□ -2.76
RNU6-539P-201ENST00000516665 ANKRD22Q5VYY1 191 aa-2.17□□□□□ -2.76
RNU6-539P-201ENST00000516665 C22orf42Q6IC83 251 aa-2.17□□□□□ -2.76
RNU6-539P-201ENST00000516665 PLBD1Q6P4A8 553 aa-2.17□□□□□ -2.76
RNU6-539P-201ENST00000516665 HSDL2Q6YN16 418 aa-2.17□□□□□ -2.76
RNU6-539P-201ENST00000516665 ARCQ7LC44 396 aa-2.17□□□□□ -2.76
RNU6-539P-201ENST00000516665 ZNF101Q8IZC7 436 aa-2.17□□□□□ -2.76
RNU6-539P-201ENST00000516665 SELENOHQ8IZQ5 122 aaKnown RBP-2.17□□□□□ -2.76
RNU6-539P-201ENST00000516665 OR4F15Q8NGB8 312 aa-2.17□□□□□ -2.76
RNU6-539P-201ENST00000516665 OR52J3Q8NH60 311 aa-2.17□□□□□ -2.76
RNU6-539P-201ENST00000516665 LHX4Q969G2 390 aa-2.17□□□□□ -2.76
RNU6-539P-201ENST00000516665 CPXM1Q96SM3 734 aa-2.17□□□□□ -2.76
RNU6-539P-201ENST00000516665 KCTD14Q9BQ13 255 aaPredicted RBP-2.17□□□□□ -2.76
RNU6-539P-201ENST00000516665 ALX4Q9H161 411 aaPredicted RBP-2.17□□□□□ -2.76
RNU6-539P-201ENST00000516665 XAB2Q9HCS7 855 aaKnown RBP-2.17□□□□□ -2.76
RNU6-539P-201ENST00000516665 PLEK2Q9NYT0 353 aa-2.17□□□□□ -2.76
RNU6-539P-201ENST00000516665 TECRQ9NZ01 308 aaKnown RBP-2.17□□□□□ -2.76
RNU6-539P-201ENST00000516665 SLC24A2Q9UI40 661 aa-2.17□□□□□ -2.76
RNU6-539P-201ENST00000516665 TMED7Q9Y3B3 224 aa-2.17□□□□□ -2.76
RNU6-539P-201ENST00000516665 NCOR1O75376 2440 aa-2.18□□□□□ -2.76
RNU6-539P-201ENST00000516665 METP08581 1390 aa-2.18□□□□□ -2.76
RNU6-539P-201ENST00000516665 IGHV3OR16-13A0A075B7E8 117 aa-2.18□□□□□ -2.76
RNU6-539P-201ENST00000516665 GTPBP10A4D1E9 387 aaKnown RBP-2.18□□□□□ -2.76
RNU6-539P-201ENST00000516665 HELTA6NFD8 242 aa-2.18□□□□□ -2.76
RNU6-539P-201ENST00000516665 CEACAM18A8MTB9 384 aa-2.18□□□□□ -2.76
RNU6-539P-201ENST00000516665 IGLL5B9A064 214 aa-2.18□□□□□ -2.76
RNU6-539P-201ENST00000516665 PEX7O00628 323 aa-2.18□□□□□ -2.76
RNU6-539P-201ENST00000516665 CLDN4O14493 209 aa-2.18□□□□□ -2.76
RNU6-539P-201ENST00000516665 MBTPS2O43462 519 aa-2.18□□□□□ -2.76
RNU6-539P-201ENST00000516665 SYNGR2O43760 224 aa-2.18□□□□□ -2.76
RNU6-539P-201ENST00000516665 MYL6BP14649 208 aa-2.18□□□□□ -2.76
RNU6-539P-201ENST00000516665 CHKAP35790 457 aa-2.18□□□□□ -2.76
RNU6-539P-201ENST00000516665 PPP1CBP62140 327 aa-2.18□□□□□ -2.76
RNU6-539P-201ENST00000516665 PRAMEP78395 509 aa-2.18□□□□□ -2.76
RNU6-539P-201ENST00000516665 SLMAPQ14BN4 828 aa-2.18□□□□□ -2.76
RNU6-539P-201ENST00000516665 TBCEQ15813 527 aaPredicted RBP-2.18□□□□□ -2.76
RNU6-539P-201ENST00000516665 ATF7IP2Q5U623 682 aa-2.18□□□□□ -2.76
RNU6-539P-201ENST00000516665 LRRTM4Q86VH4 590 aa-2.18□□□□□ -2.76
RNU6-539P-201ENST00000516665 KDM8Q8N371 416 aa-2.18□□□□□ -2.76
RNU6-539P-201ENST00000516665 OR4K5Q8NGD3 323 aa-2.18□□□□□ -2.76
RNU6-539P-201ENST00000516665 OR6C4Q8NGE1 309 aa-2.18□□□□□ -2.76
RNU6-539P-201ENST00000516665 OR51S1Q8NGJ8 323 aa-2.18□□□□□ -2.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms