RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 UQCC2Q9BRT2 126 aa8.95□□□□□ -0.98
VCAN-210ENST00000513960 RHBGQ9H310 441 aa8.95□□□□□ -0.98
VCAN-210ENST00000513960 SYNPO2LQ9H987 977 aa8.95□□□□□ -0.98
VCAN-210ENST00000513960 TM7SF3Q9NS93 570 aa8.95□□□□□ -0.98
VCAN-210ENST00000513960 KLK11Q9UBX7 282 aa8.95□□□□□ -0.98
VCAN-210ENST00000513960 GPR160Q9UJ42 338 aa8.95□□□□□ -0.98
VCAN-210ENST00000513960 CSN2P05814 226 aa8.95□□□□□ -0.98
VCAN-210ENST00000513960 SULT1A3P0DMM9 295 aa8.95□□□□□ -0.98
VCAN-210ENST00000513960 SULT1A4P0DMN0 295 aa8.95□□□□□ -0.98
VCAN-210ENST00000513960 RAB3AP20336 220 aa8.95□□□□□ -0.98
VCAN-210ENST00000513960 S100A11P31949 105 aa8.95□□□□□ -0.98
VCAN-210ENST00000513960 CDK3Q00526 305 aa8.95□□□□□ -0.98
VCAN-210ENST00000513960 SORDQ00796 357 aa8.95□□□□□ -0.98
VCAN-210ENST00000513960 FAM78AQ5JUQ0 283 aa8.95□□□□□ -0.98
VCAN-210ENST00000513960 ADAMTSL4Q6UY14 1074 aa8.95□□□□□ -0.98
VCAN-210ENST00000513960 ANKRD53Q8N9V6 530 aa8.95□□□□□ -0.98
VCAN-210ENST00000513960 C17orf47Q8NEP4 570 aa8.95□□□□□ -0.98
VCAN-210ENST00000513960 ADAMTS15Q8TE58 950 aa8.95□□□□□ -0.98
VCAN-210ENST00000513960 GRHL3Q8TE85 626 aa8.95□□□□□ -0.98
VCAN-210ENST00000513960 ASB6Q9NWX5 421 aa8.95□□□□□ -0.98
VCAN-210ENST00000513960 PCYT1BQ9Y5K3 369 aaPredicted RBP8.95□□□□□ -0.98
VCAN-210ENST00000513960 NOTCH4Q99466 2003 aa8.95□□□□□ -0.98
VCAN-210ENST00000513960 MTCL1Q9Y4B5 1905 aaKnown RBP8.95□□□□□ -0.98
VCAN-210ENST00000513960 FAM74A7A6NL05 159 aa8.95□□□□□ -0.98
VCAN-210ENST00000513960 NDUFS4O43181 175 aa8.95□□□□□ -0.98
VCAN-210ENST00000513960 KRT33AO76009 404 aa8.95□□□□□ -0.98
VCAN-210ENST00000513960 EGFP01133 1207 aa8.95□□□□□ -0.98
VCAN-210ENST00000513960 BTCP35070 178 aa8.95□□□□□ -0.98
VCAN-210ENST00000513960 BSGP35613 385 aa8.95□□□□□ -0.98
VCAN-210ENST00000513960 ADH7P40394 386 aa8.95□□□□□ -0.98
VCAN-210ENST00000513960 TSPAN31Q12999 210 aa8.95□□□□□ -0.98
VCAN-210ENST00000513960 FAM74A3Q4VXF1 159 aa8.95□□□□□ -0.98
VCAN-210ENST00000513960 TMEM69Q5SWH9 247 aa8.95□□□□□ -0.98
VCAN-210ENST00000513960 TMUB2Q71RG4 321 aa8.95□□□□□ -0.98
VCAN-210ENST00000513960 SFTPA1Q8IWL2 248 aa8.95□□□□□ -0.98
VCAN-210ENST00000513960 CDK20Q8IZL9 346 aa8.95□□□□□ -0.98
VCAN-210ENST00000513960 TTLQ8NG68 377 aa8.95□□□□□ -0.98
VCAN-210ENST00000513960 OR52H1Q8NGJ2 320 aa8.95□□□□□ -0.98
VCAN-210ENST00000513960 CNOT9Q92600 299 aaKnown RBP8.95□□□□□ -0.98
VCAN-210ENST00000513960 BADQ92934 168 aa8.95□□□□□ -0.98
VCAN-210ENST00000513960 ZG16BQ96DA0 208 aa8.95□□□□□ -0.98
VCAN-210ENST00000513960 KLHL15Q96M94 604 aa8.95□□□□□ -0.98
VCAN-210ENST00000513960 DERL3Q96Q80 235 aa8.95□□□□□ -0.98
VCAN-210ENST00000513960 ZNF471Q9BX82 626 aaPredicted RBP8.95□□□□□ -0.98
VCAN-210ENST00000513960 MFFQ9GZY8 342 aa8.95□□□□□ -0.98
VCAN-210ENST00000513960 KRCC1Q9NPI7 259 aaPredicted RBP8.95□□□□□ -0.98
VCAN-210ENST00000513960 KCNMB2Q9Y691 235 aa8.95□□□□□ -0.98
VCAN-210ENST00000513960 LOC100509620A0A075B734 347 aa8.94□□□□□ -0.98
VCAN-210ENST00000513960 ANKRD61A6NGH8 418 aa8.94□□□□□ -0.98
VCAN-210ENST00000513960 OTOL1A6NHN0 477 aaPredicted RBP8.94□□□□□ -0.98
VCAN-210ENST00000513960 ACOD1A6NK06 481 aa8.94□□□□□ -0.98
VCAN-210ENST00000513960 RIIAD1A6NNX1 92 aa8.94□□□□□ -0.98
VCAN-210ENST00000513960 CLUP10909 449 aa8.94□□□□□ -0.98
VCAN-210ENST00000513960 ATF1P18846 271 aa8.94□□□□□ -0.98
VCAN-210ENST00000513960 ATP5A1P25705 553 aaKnown RBP8.94□□□□□ -0.98
VCAN-210ENST00000513960 AP3S2P59780 193 aa8.94□□□□□ -0.98
VCAN-210ENST00000513960 ZP1P60852 638 aa8.94□□□□□ -0.98
VCAN-210ENST00000513960 SCRN3Q0VDG4 424 aa8.94□□□□□ -0.98
VCAN-210ENST00000513960 ZNF155Q12901 538 aaPredicted RBP8.94□□□□□ -0.98
VCAN-210ENST00000513960 CAMK1Q14012 370 aa8.94□□□□□ -0.98
VCAN-210ENST00000513960 PDGFRLQ15198 375 aa8.94□□□□□ -0.98
VCAN-210ENST00000513960 METRNLQ641Q3 311 aa8.94□□□□□ -0.98
VCAN-210ENST00000513960 C1orf94Q6P1W5 598 aa8.94□□□□□ -0.98
VCAN-210ENST00000513960 FCRLAQ7L513 359 aa8.94□□□□□ -0.98
VCAN-210ENST00000513960 LINC00518Q8N0U6 118 aa8.94□□□□□ -0.98
VCAN-210ENST00000513960 LINC00471Q8N535 108 aa8.94□□□□□ -0.98
VCAN-210ENST00000513960 TMEM185AQ8NFB2 350 aa8.94□□□□□ -0.98
VCAN-210ENST00000513960 OR6K6Q8NGW6 343 aa8.94□□□□□ -0.98
VCAN-210ENST00000513960 FCAMRQ8WWV6 532 aa8.94□□□□□ -0.98
VCAN-210ENST00000513960 SMARCD2Q92925 531 aa8.94□□□□□ -0.98
VCAN-210ENST00000513960 ZMYND19Q96E35 227 aaPredicted RBP8.94□□□□□ -0.98
VCAN-210ENST00000513960 OR14A2Q96R54 314 aa8.94□□□□□ -0.98
VCAN-210ENST00000513960 SCPEP1Q9HB40 452 aa8.94□□□□□ -0.98
VCAN-210ENST00000513960 A4GALTQ9NPC4 353 aa8.94□□□□□ -0.98
VCAN-210ENST00000513960 KIF25Q9UIL4 384 aa8.94□□□□□ -0.98
VCAN-210ENST00000513960 SLC7A7Q9UM01 511 aa8.94□□□□□ -0.98
VCAN-210ENST00000513960 MKI67P46013 3256 aaKnown RBP8.94□□□□□ -0.98
VCAN-210ENST00000513960 A0A1B0GVT2 93 aa8.94□□□□□ -0.98
VCAN-210ENST00000513960 CDHR4A6H8M9 788 aa8.94□□□□□ -0.98
VCAN-210ENST00000513960 BET1O15155 118 aa8.94□□□□□ -0.98
VCAN-210ENST00000513960 CASC3O15234 703 aaKnown RBP8.94□□□□□ -0.98
VCAN-210ENST00000513960 CHRM4P08173 479 aa8.94□□□□□ -0.98
VCAN-210ENST00000513960 PVALBP20472 110 aaPredicted RBP8.94□□□□□ -0.98
VCAN-210ENST00000513960 WASP42768 502 aa8.94□□□□□ -0.98
VCAN-210ENST00000513960 RIN1Q13671 783 aa8.94□□□□□ -0.98
VCAN-210ENST00000513960 ENTPD8Q5MY95 495 aa8.94□□□□□ -0.98
VCAN-210ENST00000513960 FRRS1Q6ZNA5 592 aa8.94□□□□□ -0.98
VCAN-210ENST00000513960 ARL14Q8N4G2 192 aa8.94□□□□□ -0.98
VCAN-210ENST00000513960 OR5M1Q8NGP8 315 aa8.94□□□□□ -0.98
VCAN-210ENST00000513960 OR10K1Q8NGX5 313 aa8.94□□□□□ -0.98
VCAN-210ENST00000513960 COX14Q96I36 57 aa8.94□□□□□ -0.98
VCAN-210ENST00000513960 SLC38A3Q99624 504 aa8.94□□□□□ -0.98
VCAN-210ENST00000513960 LGR4Q9BXB1 951 aa8.94□□□□□ -0.98
VCAN-210ENST00000513960 HDAC8Q9BY41 377 aa8.94□□□□□ -0.98
VCAN-210ENST00000513960 SLC6A20Q9NP91 592 aa8.94□□□□□ -0.98
VCAN-210ENST00000513960 AKAP7Q9P0M2 348 aaPredicted RBP8.94□□□□□ -0.98
VCAN-210ENST00000513960 GPR55Q9Y2T6 319 aaPredicted RBP8.94□□□□□ -0.98
VCAN-210ENST00000513960 LINC01553A4QN01 128 aa8.94□□□□□ -0.98
VCAN-210ENST00000513960 GLAP06280 429 aa8.94□□□□□ -0.98
VCAN-210ENST00000513960 NMBP08949 121 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms