RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 DNHD1Q96M86 4753 aa6.4□□□□□ -1.39
USP46-208ENST00000512656 DSCAMO60469 2012 aa6.4□□□□□ -1.39
USP46-208ENST00000512656 TRIM64A6NGJ6 449 aa6.39□□□□□ -1.39
USP46-208ENST00000512656 TRIM64BA6NI03 449 aa6.39□□□□□ -1.39
USP46-208ENST00000512656 SMIM23A6NLE4 172 aa6.39□□□□□ -1.39
USP46-208ENST00000512656 ZNF195O14628 629 aa6.39□□□□□ -1.39
USP46-208ENST00000512656 LSM1O15116 133 aaKnown RBP6.39□□□□□ -1.39
USP46-208ENST00000512656 SCAMP2O15127 329 aaKnown RBP6.39□□□□□ -1.39
USP46-208ENST00000512656 NPHS1O60500 1241 aa6.39□□□□□ -1.39
USP46-208ENST00000512656 PRKD3O94806 890 aa6.39□□□□□ -1.39
USP46-208ENST00000512656 OPN1LWP04000 364 aa6.39□□□□□ -1.39
USP46-208ENST00000512656 HMGN2P05204 90 aaKnown RBP6.39□□□□□ -1.39
USP46-208ENST00000512656 YES1P07947 543 aa6.39□□□□□ -1.39
USP46-208ENST00000512656 LINGO3P0C6S8 592 aa6.39□□□□□ -1.39
USP46-208ENST00000512656 HOXA5P20719 270 aa6.39□□□□□ -1.39
USP46-208ENST00000512656 PCSK6P29122 969 aa6.39□□□□□ -1.39
USP46-208ENST00000512656 AGTR1P30556 359 aa6.39□□□□□ -1.39
USP46-208ENST00000512656 SLC7A1P30825 629 aa6.39□□□□□ -1.39
USP46-208ENST00000512656 SFTPDP35247 375 aa6.39□□□□□ -1.39
USP46-208ENST00000512656 CCT3P49368 545 aaKnown RBP6.39□□□□□ -1.39
USP46-208ENST00000512656 P2RX1P51575 399 aa6.39□□□□□ -1.39
USP46-208ENST00000512656 RPS4XP62701 263 aaKnown RBP6.39□□□□□ -1.39
USP46-208ENST00000512656 TP53BP2Q13625 1128 aa6.39□□□□□ -1.39
USP46-208ENST00000512656 LASP1Q14847 261 aaKnown RBP6.39□□□□□ -1.39
USP46-208ENST00000512656 P2RY6Q15077 328 aa6.39□□□□□ -1.39
USP46-208ENST00000512656 ZNF239Q16600 458 aaKnown RBP6.39□□□□□ -1.39
USP46-208ENST00000512656 CCNJQ5T5M9 372 aa6.39□□□□□ -1.39
USP46-208ENST00000512656 KANK2Q63ZY3 851 aa6.39□□□□□ -1.39
USP46-208ENST00000512656 ADAM5Q6NVV9 412 aa6.39□□□□□ -1.39
USP46-208ENST00000512656 CDC73Q6P1J9 531 aa6.39□□□□□ -1.39
USP46-208ENST00000512656 FCRLAQ7L513 359 aa6.39□□□□□ -1.39
USP46-208ENST00000512656 SSX8Q7RTT4 187 aa6.39□□□□□ -1.39
USP46-208ENST00000512656 CIARTQ8N365 385 aaPredicted RBP6.39□□□□□ -1.39
USP46-208ENST00000512656 OR2T11Q8NH01 316 aa6.39□□□□□ -1.39
USP46-208ENST00000512656 SFXN5Q8TD22 340 aa6.39□□□□□ -1.39
USP46-208ENST00000512656 RNF128Q8TEB7 428 aa6.39□□□□□ -1.39
USP46-208ENST00000512656 TWIST2Q8WVJ9 160 aa6.39□□□□□ -1.39
USP46-208ENST00000512656 IGFBPL1Q8WX77 278 aa6.39□□□□□ -1.39
USP46-208ENST00000512656 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.39□□□□□ -1.39
USP46-208ENST00000512656 AKAP1Q92667 903 aaKnown RBP eCLIP6.39□□□□□ -1.39
USP46-208ENST00000512656 KISS1RQ969F8 398 aaPredicted RBP6.39□□□□□ -1.39
USP46-208ENST00000512656 TRMT61AQ96FX7 289 aaKnown RBP6.39□□□□□ -1.39
USP46-208ENST00000512656 C16orf58Q96GQ5 468 aa6.39□□□□□ -1.39
USP46-208ENST00000512656 MRGPRX4Q96LA9 322 aa6.39□□□□□ -1.39
USP46-208ENST00000512656 TMEM204Q9BSN7 226 aa6.39□□□□□ -1.39
USP46-208ENST00000512656 ACTRT3Q9BYD9 372 aa6.39□□□□□ -1.39
USP46-208ENST00000512656 PIGUQ9H490 435 aa6.39□□□□□ -1.39
USP46-208ENST00000512656 TUBB1Q9H4B7 451 aa6.39□□□□□ -1.39
USP46-208ENST00000512656 KLHL13Q9P2N7 655 aa6.39□□□□□ -1.39
USP46-208ENST00000512656 RNF115Q9Y4L5 304 aa6.39□□□□□ -1.39
USP46-208ENST00000512656 DNAJC15Q9Y5T4 150 aa6.39□□□□□ -1.39
USP46-208ENST00000512656 PTGDR2Q9Y5Y4 395 aa6.39□□□□□ -1.39
USP46-208ENST00000512656 DUXAA6NLW8 204 aa6.38□□□□□ -1.39
USP46-208ENST00000512656 PIP5K1BO14986 540 aa6.38□□□□□ -1.39
USP46-208ENST00000512656 CLOCKO15516 846 aa6.38□□□□□ -1.39
USP46-208ENST00000512656 EIF4E2O60573 245 aaKnown RBP6.38□□□□□ -1.39
USP46-208ENST00000512656 AK1P00568 194 aa6.38□□□□□ -1.39
USP46-208ENST00000512656 PLAUP00749 431 aa6.38□□□□□ -1.39
USP46-208ENST00000512656 SHBGP04278 402 aa6.38□□□□□ -1.39
USP46-208ENST00000512656 GSNP06396 782 aa6.38□□□□□ -1.39
USP46-208ENST00000512656 CD3EP07766 207 aa6.38□□□□□ -1.39
USP46-208ENST00000512656 LAMP1P11279 417 aa6.38□□□□□ -1.39
USP46-208ENST00000512656 EFNA1P20827 205 aaPredicted RBP6.38□□□□□ -1.39
USP46-208ENST00000512656 PRPS1L1P21108 318 aa6.38□□□□□ -1.39
USP46-208ENST00000512656 IDUAP35475 653 aa6.38□□□□□ -1.39
USP46-208ENST00000512656 SERPINB5P36952 375 aa6.38□□□□□ -1.39
USP46-208ENST00000512656 ATP12AP54707 1039 aa6.38□□□□□ -1.39
USP46-208ENST00000512656 RAC3P60763 192 aa6.38□□□□□ -1.39
USP46-208ENST00000512656 ZNF117Q03924 483 aa6.38□□□□□ -1.39
USP46-208ENST00000512656 FOXF1Q12946 379 aa6.38□□□□□ -1.39
USP46-208ENST00000512656 SELENBP1Q13228 472 aa6.38□□□□□ -1.39
USP46-208ENST00000512656 MAD2L1Q13257 205 aaPredicted RBP6.38□□□□□ -1.39
USP46-208ENST00000512656 ITGADQ13349 1161 aa6.38□□□□□ -1.39
USP46-208ENST00000512656 CAPRIN1Q14444 709 aaKnown RBP6.38□□□□□ -1.39
USP46-208ENST00000512656 PCLAFQ15004 111 aa6.38□□□□□ -1.39
USP46-208ENST00000512656 CD226Q15762 336 aa6.38□□□□□ -1.39
USP46-208ENST00000512656 TMEM176BQ3YBM2 270 aaPredicted RBP6.38□□□□□ -1.39
USP46-208ENST00000512656 ATP6AP1LQ52LC2 224 aa6.38□□□□□ -1.39
USP46-208ENST00000512656 KLHL26Q53HC5 615 aa6.38□□□□□ -1.39
USP46-208ENST00000512656 ARL13AQ5H913 290 aaPredicted RBP6.38□□□□□ -1.39
USP46-208ENST00000512656 DCST2Q5T1A1 773 aa6.38□□□□□ -1.39
USP46-208ENST00000512656 TFAP2EQ6VUC0 442 aa6.38□□□□□ -1.39
USP46-208ENST00000512656 TUSC5Q8IXB3 177 aa6.38□□□□□ -1.39
USP46-208ENST00000512656 C4orf33Q8N1A6 199 aa6.38□□□□□ -1.39
USP46-208ENST00000512656 GABRG1Q8N1C3 465 aa6.38□□□□□ -1.39
USP46-208ENST00000512656 RIBC1Q8N443 379 aaPredicted RBP6.38□□□□□ -1.39
USP46-208ENST00000512656 TMCO5AQ8N6Q1 288 aa6.38□□□□□ -1.39
USP46-208ENST00000512656 TOR1AIP2Q8NFQ8 470 aa6.38□□□□□ -1.39
USP46-208ENST00000512656 OR7A2PQ8NGA2 310 aa6.38□□□□□ -1.39
USP46-208ENST00000512656 PSMA8Q8TAA3 256 aa6.38□□□□□ -1.39
USP46-208ENST00000512656 POC1BQ8TC44 478 aa6.38□□□□□ -1.39
USP46-208ENST00000512656 ZFP90Q8TF47 636 aa6.38□□□□□ -1.39
USP46-208ENST00000512656 ABHD3Q8WU67 409 aa6.38□□□□□ -1.39
USP46-208ENST00000512656 ROBO4Q8WZ75 1007 aa6.38□□□□□ -1.39
USP46-208ENST00000512656 CDS1Q92903 461 aa6.38□□□□□ -1.39
USP46-208ENST00000512656 FBXW5Q969U6 566 aa6.38□□□□□ -1.39
USP46-208ENST00000512656 S100PBPQ96BU1 408 aa6.38□□□□□ -1.39
USP46-208ENST00000512656 MUCL1Q96DR8 90 aa6.38□□□□□ -1.39
USP46-208ENST00000512656 OTUB1Q96FW1 271 aaPredicted RBP6.38□□□□□ -1.39
USP46-208ENST00000512656 POTEKPQ9BYX7 375 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms