RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 C1orf146Q5VVC0 180 aa5.67□□□□□ -1.5
TRAPPC11-209ENST00000512476 ULK3Q6PHR2 472 aa5.67□□□□□ -1.5
TRAPPC11-209ENST00000512476 LRRC31Q6UY01 552 aa5.67□□□□□ -1.5
TRAPPC11-209ENST00000512476 CDHR3Q6ZTQ4 885 aa5.67□□□□□ -1.5
TRAPPC11-209ENST00000512476 CRLF3Q8IUI8 442 aa5.67□□□□□ -1.5
TRAPPC11-209ENST00000512476 PGAM4Q8N0Y7 254 aa5.67□□□□□ -1.5
TRAPPC11-209ENST00000512476 OR56A4Q8NGH8 313 aa5.67□□□□□ -1.5
TRAPPC11-209ENST00000512476 DYNC2LI1Q8TCX1 351 aa5.67□□□□□ -1.5
TRAPPC11-209ENST00000512476 LRRC15Q8TF66 581 aa5.67□□□□□ -1.5
TRAPPC11-209ENST00000512476 SLC38A5Q8WUX1 472 aa5.67□□□□□ -1.5
TRAPPC11-209ENST00000512476 PYDC1Q8WXC3 89 aa5.67□□□□□ -1.5
TRAPPC11-209ENST00000512476 C18orf25Q96B23 403 aaPredicted RBP5.67□□□□□ -1.5
TRAPPC11-209ENST00000512476 PRRT1Q99946 306 aa5.67□□□□□ -1.5
TRAPPC11-209ENST00000512476 BOLA2Q9H3K6 86 aa5.67□□□□□ -1.5
TRAPPC11-209ENST00000512476 SLC17A5Q9NRA2 495 aa5.67□□□□□ -1.5
TRAPPC11-209ENST00000512476 NPAP1Q9NZP6 1156 aa5.67□□□□□ -1.5
TRAPPC11-209ENST00000512476 GMPPBQ9Y5P6 360 aa5.67□□□□□ -1.5
TRAPPC11-209ENST00000512476 PITPNM2Q9BZ72 1349 aa5.67□□□□□ -1.5
TRAPPC11-209ENST00000512476 SLC5A10A0PJK1 596 aa5.67□□□□□ -1.5
TRAPPC11-209ENST00000512476 ANTXRLA6NF34 631 aa5.67□□□□□ -1.5
TRAPPC11-209ENST00000512476 LINC00587B1AMM8 73 aa5.67□□□□□ -1.5
TRAPPC11-209ENST00000512476 CLDN5O00501 218 aa5.67□□□□□ -1.5
TRAPPC11-209ENST00000512476 STX7O15400 261 aaKnown RBP5.67□□□□□ -1.5
TRAPPC11-209ENST00000512476 NUPL2O15504 423 aaKnown RBP5.67□□□□□ -1.5
TRAPPC11-209ENST00000512476 CHST1O43916 411 aa5.67□□□□□ -1.5
TRAPPC11-209ENST00000512476 RGS11O94810 467 aa5.67□□□□□ -1.5
TRAPPC11-209ENST00000512476 HMOX2P30519 316 aa5.67□□□□□ -1.5
TRAPPC11-209ENST00000512476 CD81P60033 236 aa5.67□□□□□ -1.5
TRAPPC11-209ENST00000512476 RAB4BP61018 213 aa5.67□□□□□ -1.5
TRAPPC11-209ENST00000512476 WDR5P61964 334 aaKnown RBP5.67□□□□□ -1.5
TRAPPC11-209ENST00000512476 RPS15AP62244 130 aaKnown RBP5.67□□□□□ -1.5
TRAPPC11-209ENST00000512476 MRPS22P82650 360 aaKnown RBP5.67□□□□□ -1.5
TRAPPC11-209ENST00000512476 ZNF45Q02386 682 aa5.67□□□□□ -1.5
TRAPPC11-209ENST00000512476 NME3Q13232 169 aa5.67□□□□□ -1.5
TRAPPC11-209ENST00000512476 ACCSLQ4AC99 568 aa5.67□□□□□ -1.5
TRAPPC11-209ENST00000512476 SAMD4BQ5PRF9 694 aaKnown RBP5.67□□□□□ -1.5
TRAPPC11-209ENST00000512476 LAIR1Q6GTX8 287 aa5.67□□□□□ -1.5
TRAPPC11-209ENST00000512476 SMIM15Q7Z3B0 74 aa5.67□□□□□ -1.5
TRAPPC11-209ENST00000512476 NUFIP2Q7Z417 695 aaKnown RBP5.67□□□□□ -1.5
TRAPPC11-209ENST00000512476 AMIGO1Q86WK6 493 aa5.67□□□□□ -1.5
TRAPPC11-209ENST00000512476 CNBD1Q8NA66 436 aa5.67□□□□□ -1.5
TRAPPC11-209ENST00000512476 MDS2Q8NDY4 140 aa5.67□□□□□ -1.5
TRAPPC11-209ENST00000512476 DDHD1Q8NEL9 900 aa5.67□□□□□ -1.5
TRAPPC11-209ENST00000512476 TFAP2BQ92481 460 aa5.67□□□□□ -1.5
TRAPPC11-209ENST00000512476 FBXL8Q96CD0 374 aa5.67□□□□□ -1.5
TRAPPC11-209ENST00000512476 GUCD1Q96NT3 240 aa5.67□□□□□ -1.5
TRAPPC11-209ENST00000512476 PNKPQ96T60 521 aa5.67□□□□□ -1.5
TRAPPC11-209ENST00000512476 TTYH2Q9BSA4 534 aa5.67□□□□□ -1.5
TRAPPC11-209ENST00000512476 DUSP26Q9BV47 211 aa5.67□□□□□ -1.5
TRAPPC11-209ENST00000512476 TRIM15Q9C019 465 aa5.67□□□□□ -1.5
TRAPPC11-209ENST00000512476 SPRTNQ9H040 489 aaPredicted RBP5.67□□□□□ -1.5
TRAPPC11-209ENST00000512476 MMP28Q9H239 520 aa5.67□□□□□ -1.5
TRAPPC11-209ENST00000512476 SEMA6AQ9H2E6 1030 aa5.67□□□□□ -1.5
TRAPPC11-209ENST00000512476 NLE1Q9NVX2 485 aaPredicted RBP5.67□□□□□ -1.5
TRAPPC11-209ENST00000512476 CD274Q9NZQ7 290 aa5.67□□□□□ -1.5
TRAPPC11-209ENST00000512476 ERVW-1Q9UQF0 538 aa5.67□□□□□ -1.5
TRAPPC11-209ENST00000512476 TCF19Q9Y242 345 aa5.67□□□□□ -1.5
TRAPPC11-209ENST00000512476 POLR3HQ9Y535 204 aaPredicted RBP5.67□□□□□ -1.5
TRAPPC11-209ENST00000512476 RGPD3A6NKT7 1758 aaPredicted RBP5.66□□□□□ -1.5
TRAPPC11-209ENST00000512476 RGPD4Q7Z3J3 1758 aa5.66□□□□□ -1.5
TRAPPC11-209ENST00000512476 CASZ1Q86V15 1759 aa5.66□□□□□ -1.5
TRAPPC11-209ENST00000512476 CARMIL3Q8ND23 1372 aa5.66□□□□□ -1.5
TRAPPC11-209ENST00000512476 ATXN2Q99700 1313 aaKnown RBP5.66□□□□□ -1.5
TRAPPC11-209ENST00000512476 VSTM2BA6NLU5 285 aa5.66□□□□□ -1.5
TRAPPC11-209ENST00000512476 SULT1C2O00338 296 aa5.66□□□□□ -1.5
TRAPPC11-209ENST00000512476 NDUFA7O95182 113 aa5.66□□□□□ -1.5
TRAPPC11-209ENST00000512476 PSMG1O95456 288 aa5.66□□□□□ -1.5
TRAPPC11-209ENST00000512476 CRYZL1O95825 349 aa5.66□□□□□ -1.5
TRAPPC11-209ENST00000512476 ADORA3P0DMS8 318 aa5.66□□□□□ -1.5
TRAPPC11-209ENST00000512476 GLB1P16278 677 aa5.66□□□□□ -1.5
TRAPPC11-209ENST00000512476 FPR3P25089 353 aa5.66□□□□□ -1.5
TRAPPC11-209ENST00000512476 BRCC3P46736 316 aa5.66□□□□□ -1.5
TRAPPC11-209ENST00000512476 RASSF2P50749 326 aa5.66□□□□□ -1.5
TRAPPC11-209ENST00000512476 XKP51811 444 aa5.66□□□□□ -1.5
TRAPPC11-209ENST00000512476 PRELPP51888 382 aa5.66□□□□□ -1.5
TRAPPC11-209ENST00000512476 FGF8P55075 233 aaPredicted RBP5.66□□□□□ -1.5
TRAPPC11-209ENST00000512476 ZNHIT3Q15649 155 aaPredicted RBP5.66□□□□□ -1.5
TRAPPC11-209ENST00000512476 ZNF699Q32M78 642 aa5.66□□□□□ -1.5
TRAPPC11-209ENST00000512476 LCE2DQ5TA82 110 aaPredicted RBP5.66□□□□□ -1.5
TRAPPC11-209ENST00000512476 C11orf63Q6NUN7 778 aa5.66□□□□□ -1.5
TRAPPC11-209ENST00000512476 VWA1Q6PCB0 445 aa5.66□□□□□ -1.5
TRAPPC11-209ENST00000512476 USP43Q70EL4 1123 aa5.66□□□□□ -1.5
TRAPPC11-209ENST00000512476 TIPARPQ7Z3E1 657 aaKnown RBP5.66□□□□□ -1.5
TRAPPC11-209ENST00000512476 ZNF761Q86XN6 746 aaPredicted RBP5.66□□□□□ -1.5
TRAPPC11-209ENST00000512476 TMEM25Q86YD3 366 aa5.66□□□□□ -1.5
TRAPPC11-209ENST00000512476 KIRREL3Q8IZU9 778 aa5.66□□□□□ -1.5
TRAPPC11-209ENST00000512476 METTL4Q8N3J2 472 aa5.66□□□□□ -1.5
TRAPPC11-209ENST00000512476 SLC44A3Q8N4M1 653 aa5.66□□□□□ -1.5
TRAPPC11-209ENST00000512476 C8orf31Q8N9H6 132 aa5.66□□□□□ -1.5
TRAPPC11-209ENST00000512476 OR6Q1Q8NGQ2 317 aa5.66□□□□□ -1.5
TRAPPC11-209ENST00000512476 TMEM239Q8WW34 195 aa5.66□□□□□ -1.5
TRAPPC11-209ENST00000512476 PEX11GQ96HA9 241 aa5.66□□□□□ -1.5
TRAPPC11-209ENST00000512476 ABHD14AQ9BUJ0 271 aa5.66□□□□□ -1.5
TRAPPC11-209ENST00000512476 IL25Q9H293 177 aa5.66□□□□□ -1.5
TRAPPC11-209ENST00000512476 CXXC4Q9H2H0 198 aa5.66□□□□□ -1.5
TRAPPC11-209ENST00000512476 OR51M1Q9H341 326 aa5.66□□□□□ -1.5
TRAPPC11-209ENST00000512476 Q9H8V8 135 aa5.66□□□□□ -1.5
TRAPPC11-209ENST00000512476 HINT3Q9NQE9 182 aaKnown RBP5.66□□□□□ -1.5
TRAPPC11-209ENST00000512476 FAM30AQ9NZY2 134 aa5.66□□□□□ -1.5
TRAPPC11-209ENST00000512476 PILRAQ9UKJ1 303 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms