RNA–Protein interactions for RNA: ENST00000511944.5

NR1I3-230, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-230ENST00000511944 A0A1B0GWA3 101 aa8.31□□□□□ -1.08
NR1I3-230ENST00000511944 CLDN24A6NM45 220 aa8.31□□□□□ -1.08
NR1I3-230ENST00000511944 NPIPA7E9PJI5 369 aa8.31□□□□□ -1.08
NR1I3-230ENST00000511944 GTPBP1O00178 669 aaKnown RBP8.31□□□□□ -1.08
NR1I3-230ENST00000511944 TMPRSS2O15393 492 aa8.31□□□□□ -1.08
NR1I3-230ENST00000511944 PRKNO60260 465 aaPredicted RBP8.31□□□□□ -1.08
NR1I3-230ENST00000511944 MRPS14O60783 128 aaKnown RBP8.31□□□□□ -1.08
NR1I3-230ENST00000511944 LYPD3O95274 346 aa8.31□□□□□ -1.08
NR1I3-230ENST00000511944 LYNP07948 512 aa8.31□□□□□ -1.08
NR1I3-230ENST00000511944 LINGO3P0C6S8 592 aa8.31□□□□□ -1.08
NR1I3-230ENST00000511944 CCDC159P0C7I6 412 aa8.31□□□□□ -1.08
NR1I3-230ENST00000511944 UBTFL6P0CB48 400 aaPredicted RBP8.31□□□□□ -1.08
NR1I3-230ENST00000511944 NPIPA8P0DM63 369 aa8.31□□□□□ -1.08
NR1I3-230ENST00000511944 FKBP2P26885 142 aaKnown RBP8.31□□□□□ -1.08
NR1I3-230ENST00000511944 HTR2AP28223 471 aa8.31□□□□□ -1.08
NR1I3-230ENST00000511944 DLSTP36957 453 aa8.31□□□□□ -1.08
NR1I3-230ENST00000511944 SLC1A3P43003 542 aa8.31□□□□□ -1.08
NR1I3-230ENST00000511944 RFX3P48380 749 aa8.31□□□□□ -1.08
NR1I3-230ENST00000511944 P2RX1P51575 399 aa8.31□□□□□ -1.08
NR1I3-230ENST00000511944 MLF1P58340 268 aa8.31□□□□□ -1.08
NR1I3-230ENST00000511944 CBFBQ13951 182 aa8.31□□□□□ -1.08
NR1I3-230ENST00000511944 COL9A2Q14055 689 aaPredicted RBP8.31□□□□□ -1.08
NR1I3-230ENST00000511944 SEC23BQ15437 767 aa8.31□□□□□ -1.08
NR1I3-230ENST00000511944 ZNF791Q3KP31 576 aaPredicted RBP8.31□□□□□ -1.08
NR1I3-230ENST00000511944 RBM48Q5RL73 367 aaKnown RBP8.31□□□□□ -1.08
NR1I3-230ENST00000511944 ZNF691Q5VV52 312 aa8.31□□□□□ -1.08
NR1I3-230ENST00000511944 CDPF1Q6NVV7 123 aa8.31□□□□□ -1.08
NR1I3-230ENST00000511944 KLHL17Q6TDP4 642 aa8.31□□□□□ -1.08
NR1I3-230ENST00000511944 ZNF730Q6ZMV8 503 aa8.31□□□□□ -1.08
NR1I3-230ENST00000511944 TMPRSS11FQ6ZWK6 438 aa8.31□□□□□ -1.08
NR1I3-230ENST00000511944 OR9Q2Q8NGE9 314 aa8.31□□□□□ -1.08
NR1I3-230ENST00000511944 OR5W2Q8NH69 310 aa8.31□□□□□ -1.08
NR1I3-230ENST00000511944 PHOSPHO1Q8TCT1 267 aa8.31□□□□□ -1.08
NR1I3-230ENST00000511944 TMEM239Q8WW34 195 aa8.31□□□□□ -1.08
NR1I3-230ENST00000511944 TRUB1Q8WWH5 349 aaKnown RBP8.31□□□□□ -1.08
NR1I3-230ENST00000511944 LIPHQ8WWY8 451 aa8.31□□□□□ -1.08
NR1I3-230ENST00000511944 ST8SIA1Q92185 356 aa8.31□□□□□ -1.08
NR1I3-230ENST00000511944 HDAC2Q92769 488 aaKnown RBP8.31□□□□□ -1.08
NR1I3-230ENST00000511944 NKD1Q969G9 470 aa8.31□□□□□ -1.08
NR1I3-230ENST00000511944 C8orf44Q96CB5 159 aa8.31□□□□□ -1.08
NR1I3-230ENST00000511944 NTNG2Q96CW9 530 aa8.31□□□□□ -1.08
NR1I3-230ENST00000511944 CNBD2Q96M20 576 aa8.31□□□□□ -1.08
NR1I3-230ENST00000511944 FER1L6-AS2Q96M78 137 aa8.31□□□□□ -1.08
NR1I3-230ENST00000511944 LMF1Q96S06 567 aa8.31□□□□□ -1.08
NR1I3-230ENST00000511944 RASL10BQ96S79 203 aa8.31□□□□□ -1.08
NR1I3-230ENST00000511944 PRSS27Q9BQR3 290 aa8.31□□□□□ -1.08
NR1I3-230ENST00000511944 SLC25A19Q9HC21 320 aa8.31□□□□□ -1.08
NR1I3-230ENST00000511944 P4HTMQ9NXG6 502 aa8.31□□□□□ -1.08
NR1I3-230ENST00000511944 TUBA8Q9NY65 449 aaPredicted RBP8.31□□□□□ -1.08
NR1I3-230ENST00000511944 CNIH4Q9P003 139 aa8.31□□□□□ -1.08
NR1I3-230ENST00000511944 RHCGQ9UBD6 479 aa8.31□□□□□ -1.08
NR1I3-230ENST00000511944 REV1Q9UBZ9 1251 aa8.31□□□□□ -1.08
NR1I3-230ENST00000511944 FBXL4Q9UKA2 621 aa8.31□□□□□ -1.08
NR1I3-230ENST00000511944 ICAM5Q9UMF0 924 aa8.31□□□□□ -1.08
NR1I3-230ENST00000511944 MYRFQ9Y2G1 1151 aa8.31□□□□□ -1.08
NR1I3-230ENST00000511944 MED31Q9Y3C7 131 aa8.31□□□□□ -1.08
NR1I3-230ENST00000511944 MUC6Q6W4X9 2439 aa8.31□□□□□ -1.08
NR1I3-230ENST00000511944 A0A087WUJ7 227 aa8.3□□□□□ -1.08
NR1I3-230ENST00000511944 PMS2P1A4D2B8 440 aa8.3□□□□□ -1.08
NR1I3-230ENST00000511944 ZAR1LA6NP61 321 aa8.3□□□□□ -1.08
NR1I3-230ENST00000511944 FRS3O43559 492 aa8.3□□□□□ -1.08
NR1I3-230ENST00000511944 ANGPTL1O95841 491 aa8.3□□□□□ -1.08
NR1I3-230ENST00000511944 GASTP01350 101 aa8.3□□□□□ -1.08
NR1I3-230ENST00000511944 THY1P04216 161 aa8.3□□□□□ -1.08
NR1I3-230ENST00000511944 PRG2P13727 222 aa8.3□□□□□ -1.08
NR1I3-230ENST00000511944 GGT2P36268 569 aa8.3□□□□□ -1.08
NR1I3-230ENST00000511944 OMPP47874 163 aa8.3□□□□□ -1.08
NR1I3-230ENST00000511944 SLC9A3P48764 834 aa8.3□□□□□ -1.08
NR1I3-230ENST00000511944 SSR4P51571 173 aa8.3□□□□□ -1.08
NR1I3-230ENST00000511944 CRISP1P54107 249 aa8.3□□□□□ -1.08
NR1I3-230ENST00000511944 SOX8P57073 446 aa8.3□□□□□ -1.08
NR1I3-230ENST00000511944 GABARAPL2P60520 117 aa8.3□□□□□ -1.08
NR1I3-230ENST00000511944 CDC42P60953 191 aa8.3□□□□□ -1.08
NR1I3-230ENST00000511944 TUBA4AP68366 448 aa8.3□□□□□ -1.08
NR1I3-230ENST00000511944 PRKCDQ05655 676 aa8.3□□□□□ -1.08
NR1I3-230ENST00000511944 PPP1R8Q12972 351 aaKnown RBP8.3□□□□□ -1.08
NR1I3-230ENST00000511944 AIMP2Q13155 320 aaKnown RBP8.3□□□□□ -1.08
NR1I3-230ENST00000511944 CD226Q15762 336 aa8.3□□□□□ -1.08
NR1I3-230ENST00000511944 TMEM44Q2T9K0 475 aa8.3□□□□□ -1.08
NR1I3-230ENST00000511944 ALG10BQ5I7T1 473 aa8.3□□□□□ -1.08
NR1I3-230ENST00000511944 SLC30A6Q6NXT4 461 aa8.3□□□□□ -1.08
NR1I3-230ENST00000511944 APOOLQ6UXV4 268 aa8.3□□□□□ -1.08
NR1I3-230ENST00000511944 ZER1Q7Z7L7 766 aa8.3□□□□□ -1.08
NR1I3-230ENST00000511944 ATG4DQ86TL0 474 aaPredicted RBP8.3□□□□□ -1.08
NR1I3-230ENST00000511944 RPS19BP1Q86WX3 136 aaKnown RBP8.3□□□□□ -1.08
NR1I3-230ENST00000511944 OR6S1Q8NH40 331 aa8.3□□□□□ -1.08
NR1I3-230ENST00000511944 GRHL3Q8TE85 626 aa8.3□□□□□ -1.08
NR1I3-230ENST00000511944 PAQR8Q8TEZ7 354 aa8.3□□□□□ -1.08
NR1I3-230ENST00000511944 THAP4Q8WY91 577 aa8.3□□□□□ -1.08
NR1I3-230ENST00000511944 TMEM234Q8WY98 164 aa8.3□□□□□ -1.08
NR1I3-230ENST00000511944 C3orf49Q96BT1 292 aa8.3□□□□□ -1.08
NR1I3-230ENST00000511944 NXPE2Q96DL1 559 aa8.3□□□□□ -1.08
NR1I3-230ENST00000511944 MUS81Q96NY9 551 aa8.3□□□□□ -1.08
NR1I3-230ENST00000511944 NIPSNAP1Q9BPW8 284 aa8.3□□□□□ -1.08
NR1I3-230ENST00000511944 TEX12Q9BXU0 123 aa8.3□□□□□ -1.08
NR1I3-230ENST00000511944 ING2Q9H160 280 aa8.3□□□□□ -1.08
NR1I3-230ENST00000511944 RIBC2Q9H4K1 309 aa8.3□□□□□ -1.08
NR1I3-230ENST00000511944 GSX1Q9H4S2 264 aaPredicted RBP8.3□□□□□ -1.08
NR1I3-230ENST00000511944 ZNF160Q9HCG1 818 aa8.3□□□□□ -1.08
NR1I3-230ENST00000511944 MED17Q9NVC6 651 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms