RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 ATP8B1O43520 1251 aa14.41□□□□□ -0.1
PDLIM5-212ENST00000509333 SS18L1O75177 396 aaPredicted RBP14.41□□□□□ -0.1
PDLIM5-212ENST00000509333 PABPC4LP0CB38 370 aaKnown RBP14.41□□□□□ -0.1
PDLIM5-212ENST00000509333 ACAA2P42765 397 aaKnown RBP14.41□□□□□ -0.1
PDLIM5-212ENST00000509333 CPA2P48052 419 aa14.41□□□□□ -0.1
PDLIM5-212ENST00000509333 GNA13Q14344 377 aa14.41□□□□□ -0.1
PDLIM5-212ENST00000509333 RUNDC3AQ59EK9 446 aa14.41□□□□□ -0.1
PDLIM5-212ENST00000509333 MRPL2Q5T653 305 aaKnown RBP14.41□□□□□ -0.1
PDLIM5-212ENST00000509333 PRAMEF8Q5VWM4 474 aa14.41□□□□□ -0.1
PDLIM5-212ENST00000509333 PRAMEF7Q5VXH5 474 aa14.41□□□□□ -0.1
PDLIM5-212ENST00000509333 TMPPEQ6ZT21 453 aa14.41□□□□□ -0.1
PDLIM5-212ENST00000509333 GRINAQ7Z429 371 aa14.41□□□□□ -0.1
PDLIM5-212ENST00000509333 DPP10Q8N608 796 aa14.41□□□□□ -0.1
PDLIM5-212ENST00000509333 ZNF563Q8TA94 476 aa14.41□□□□□ -0.1
PDLIM5-212ENST00000509333 TSPEARQ8WU66 669 aa14.41□□□□□ -0.1
PDLIM5-212ENST00000509333 WDR60Q8WVS4 1066 aa14.41□□□□□ -0.1
PDLIM5-212ENST00000509333 MAL2Q969L2 176 aa14.41□□□□□ -0.1
PDLIM5-212ENST00000509333 CPNE4Q96A23 557 aaPredicted RBP14.41□□□□□ -0.1
PDLIM5-212ENST00000509333 ADAM19Q9H013 955 aa14.41□□□□□ -0.1
PDLIM5-212ENST00000509333 IKZF5Q9H5V7 419 aa14.41□□□□□ -0.1
PDLIM5-212ENST00000509333 A4GALTQ9NPC4 353 aa14.41□□□□□ -0.1
PDLIM5-212ENST00000509333 CTPS2Q9NRF8 586 aa14.41□□□□□ -0.1
PDLIM5-212ENST00000509333 ELOVL5Q9NYP7 299 aa14.41□□□□□ -0.1
PDLIM5-212ENST00000509333 PROCRQ9UNN8 238 aa14.41□□□□□ -0.1
PDLIM5-212ENST00000509333 TRIM33Q9UPN9 1127 aa14.41□□□□□ -0.1
PDLIM5-212ENST00000509333 NDUFAF1Q9Y375 327 aa14.41□□□□□ -0.1
PDLIM5-212ENST00000509333 MYO9AB2RTY4 2548 aa14.41□□□□□ -0.1
PDLIM5-212ENST00000509333 CFAP73A6NFT4 308 aa14.4□□□□□ -0.1
PDLIM5-212ENST00000509333 PRKD3O94806 890 aa14.4□□□□□ -0.1
PDLIM5-212ENST00000509333 PGM3O95394 542 aa14.4□□□□□ -0.1
PDLIM5-212ENST00000509333 BCHEP06276 602 aa14.4□□□□□ -0.1
PDLIM5-212ENST00000509333 PPIBP23284 216 aaKnown RBP14.4□□□□□ -0.1
PDLIM5-212ENST00000509333 FKBP2P26885 142 aaKnown RBP14.4□□□□□ -0.1
PDLIM5-212ENST00000509333 CD79BP40259 229 aa14.4□□□□□ -0.1
PDLIM5-212ENST00000509333 SLC1A3P43003 542 aa14.4□□□□□ -0.1
PDLIM5-212ENST00000509333 GUCY1A3Q02108 690 aa14.4□□□□□ -0.1
PDLIM5-212ENST00000509333 ADRM1Q16186 407 aa14.4□□□□□ -0.1
PDLIM5-212ENST00000509333 ZNF239Q16600 458 aaKnown RBP14.4□□□□□ -0.1
PDLIM5-212ENST00000509333 RPS26P11Q5JNZ5 115 aaPredicted RBP14.4□□□□□ -0.1
PDLIM5-212ENST00000509333 CGB2Q6NT52 195 aa14.4□□□□□ -0.1
PDLIM5-212ENST00000509333 PPP4R4Q6NUP7 873 aa14.4□□□□□ -0.1
PDLIM5-212ENST00000509333 ZNF836Q6ZNA1 936 aa14.4□□□□□ -0.1
PDLIM5-212ENST00000509333 RETREG3Q86VR2 466 aa14.4□□□□□ -0.1
PDLIM5-212ENST00000509333 OR6K3Q8NGY3 331 aa14.4□□□□□ -0.1
PDLIM5-212ENST00000509333 DACH2Q96NX9 599 aa14.4□□□□□ -0.1
PDLIM5-212ENST00000509333 SLC39A3Q9BRY0 314 aa14.4□□□□□ -0.1
PDLIM5-212ENST00000509333 TMEM120AQ9BXJ8 343 aa14.4□□□□□ -0.1
PDLIM5-212ENST00000509333 CCDC134Q9H6E4 229 aa14.4□□□□□ -0.1
PDLIM5-212ENST00000509333 RASSF1Q9NS23 344 aa14.4□□□□□ -0.1
PDLIM5-212ENST00000509333 FGFR1OP2Q9NVK5 253 aa14.4□□□□□ -0.1
PDLIM5-212ENST00000509333 ING1Q9UK53 422 aaPredicted RBP14.4□□□□□ -0.1
PDLIM5-212ENST00000509333 TMEM247A6NEH6 219 aa14.39□□□□□ -0.11
PDLIM5-212ENST00000509333 A6NNC1 897 aa14.39□□□□□ -0.11
PDLIM5-212ENST00000509333 PLGP00747 810 aaPredicted RBP14.39□□□□□ -0.11
PDLIM5-212ENST00000509333 THBS1P07996 1170 aa14.39□□□□□ -0.11
PDLIM5-212ENST00000509333 GKN3PP0CG01 181 aa14.39□□□□□ -0.11
PDLIM5-212ENST00000509333 SLC7A1P30825 629 aa14.39□□□□□ -0.11
PDLIM5-212ENST00000509333 HTR3AP46098 478 aa14.39□□□□□ -0.11
PDLIM5-212ENST00000509333 CLK1P49759 484 aaKnown RBP14.39□□□□□ -0.11
PDLIM5-212ENST00000509333 CTBP2P56545 445 aa14.39□□□□□ -0.11
PDLIM5-212ENST00000509333 EPS8Q12929 822 aa14.39□□□□□ -0.11
PDLIM5-212ENST00000509333 ZSWIM7Q19AV6 140 aa14.39□□□□□ -0.11
PDLIM5-212ENST00000509333 C22orf34Q6ZV56 151 aa14.39□□□□□ -0.11
PDLIM5-212ENST00000509333 FCRLAQ7L513 359 aa14.39□□□□□ -0.11
PDLIM5-212ENST00000509333 TUSC5Q8IXB3 177 aa14.39□□□□□ -0.11
PDLIM5-212ENST00000509333 ZNF440Q8IYI8 595 aa14.39□□□□□ -0.11
PDLIM5-212ENST00000509333 SLC43A2Q8N370 569 aa14.39□□□□□ -0.11
PDLIM5-212ENST00000509333 RNF128Q8TEB7 428 aa14.39□□□□□ -0.11
PDLIM5-212ENST00000509333 ABHD3Q8WU67 409 aa14.39□□□□□ -0.11
PDLIM5-212ENST00000509333 REXO5Q96IC2 774 aaKnown RBP14.39□□□□□ -0.11
PDLIM5-212ENST00000509333 ARL5BQ96KC2 179 aa14.39□□□□□ -0.11
PDLIM5-212ENST00000509333 WFIKKN1Q96NZ8 548 aa14.39□□□□□ -0.11
PDLIM5-212ENST00000509333 OR5B2Q96R09 309 aa14.39□□□□□ -0.11
PDLIM5-212ENST00000509333 SPATA9Q9BWV2 254 aa14.39□□□□□ -0.11
PDLIM5-212ENST00000509333 GP6Q9HCN6 339 aa14.39□□□□□ -0.11
PDLIM5-212ENST00000509333 MED4Q9NPJ6 270 aa14.39□□□□□ -0.11
PDLIM5-212ENST00000509333 CHRNA9Q9UGM1 479 aa14.39□□□□□ -0.11
PDLIM5-212ENST00000509333 LEF1Q9UJU2 399 aaPredicted RBP14.39□□□□□ -0.11
PDLIM5-212ENST00000509333 OSGIN1Q9UJX0 560 aa14.39□□□□□ -0.11
PDLIM5-212ENST00000509333 IFT52Q9Y366 437 aa14.39□□□□□ -0.11
PDLIM5-212ENST00000509333 EMC9Q9Y3B6 208 aa14.39□□□□□ -0.11
PDLIM5-212ENST00000509333 FREM1Q5H8C1 2179 aa14.39□□□□□ -0.11
PDLIM5-212ENST00000509333 UQCRHLA0A096LP55 91 aa14.38□□□□□ -0.11
PDLIM5-212ENST00000509333 TMED7-TICAM2A0A0A6YYA0 188 aa14.38□□□□□ -0.11
PDLIM5-212ENST00000509333 EVPLLA8MZ36 301 aa14.38□□□□□ -0.11
PDLIM5-212ENST00000509333 C16orf97H3BN30 126 aa14.38□□□□□ -0.11
PDLIM5-212ENST00000509333 YES1P07947 543 aa14.38□□□□□ -0.11
PDLIM5-212ENST00000509333 VIMP08670 466 aaKnown RBP14.38□□□□□ -0.11
PDLIM5-212ENST00000509333 ARAFP10398 606 aa14.38□□□□□ -0.11
PDLIM5-212ENST00000509333 ETS2P15036 469 aa14.38□□□□□ -0.11
PDLIM5-212ENST00000509333 KLK2P20151 261 aa14.38□□□□□ -0.11
PDLIM5-212ENST00000509333 TACR3P29371 465 aa14.38□□□□□ -0.11
PDLIM5-212ENST00000509333 UGT2B10P36537 528 aa14.38□□□□□ -0.11
PDLIM5-212ENST00000509333 MDH1P40925 334 aaKnown RBP14.38□□□□□ -0.11
PDLIM5-212ENST00000509333 DIO1P49895 249 aa14.38□□□□□ -0.11
PDLIM5-212ENST00000509333 ARFIP2P53365 341 aa14.38□□□□□ -0.11
PDLIM5-212ENST00000509333 CDK6Q00534 326 aa14.38□□□□□ -0.11
PDLIM5-212ENST00000509333 LARS2Q15031 903 aaKnown RBP14.38□□□□□ -0.11
PDLIM5-212ENST00000509333 RNPS1Q15287 305 aaKnown RBP14.38□□□□□ -0.11
PDLIM5-212ENST00000509333 LIN52Q52LA3 116 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms