RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 PDLIM1O00151 329 aa6.16□□□□□ -1.42
VCAN-207ENST00000507162 NR5A2O00482 541 aa6.16□□□□□ -1.42
VCAN-207ENST00000507162 PLOD3O60568 738 aa6.16□□□□□ -1.42
VCAN-207ENST00000507162 COQ9O75208 318 aa6.16□□□□□ -1.42
VCAN-207ENST00000507162 BANF1O75531 89 aa6.16□□□□□ -1.42
VCAN-207ENST00000507162 CLPXO76031 633 aa6.16□□□□□ -1.42
VCAN-207ENST00000507162 KCNH1O95259 989 aa6.16□□□□□ -1.42
VCAN-207ENST00000507162 OXSR1O95747 527 aaPredicted RBP6.16□□□□□ -1.42
VCAN-207ENST00000507162 IGKV1D-16P01601 117 aa6.16□□□□□ -1.42
VCAN-207ENST00000507162 IGHV2-5P01817 119 aa6.16□□□□□ -1.42
VCAN-207ENST00000507162 KRT14P02533 472 aa6.16□□□□□ -1.42
VCAN-207ENST00000507162 CD1DP15813 335 aa6.16□□□□□ -1.42
VCAN-207ENST00000507162 ELK4P28324 431 aa6.16□□□□□ -1.42
VCAN-207ENST00000507162 ARL1P40616 181 aaPredicted RBP6.16□□□□□ -1.42
VCAN-207ENST00000507162 RNF144AP50876 292 aaPredicted RBP6.16□□□□□ -1.42
VCAN-207ENST00000507162 SLC12A2P55011 1212 aa6.16□□□□□ -1.42
VCAN-207ENST00000507162 UBE2NP61088 152 aaKnown RBP6.16□□□□□ -1.42
VCAN-207ENST00000507162 CD69Q07108 199 aa6.16□□□□□ -1.42
VCAN-207ENST00000507162 TRADDQ15628 312 aa6.16□□□□□ -1.42
VCAN-207ENST00000507162 TOMM34Q15785 309 aaPredicted RBP6.16□□□□□ -1.42
VCAN-207ENST00000507162 GLE1Q53GS7 698 aaKnown RBP6.16□□□□□ -1.42
VCAN-207ENST00000507162 SPANXN3Q5MJ09 141 aa6.16□□□□□ -1.42
VCAN-207ENST00000507162 REP15Q6BDI9 236 aa6.16□□□□□ -1.42
VCAN-207ENST00000507162 KRT80Q6KB66 452 aa6.16□□□□□ -1.42
VCAN-207ENST00000507162 CNTN4Q8IWV2 1026 aa6.16□□□□□ -1.42
VCAN-207ENST00000507162 SYCE1Q8N0S2 351 aa6.16□□□□□ -1.42
VCAN-207ENST00000507162 C1orf162Q8NEQ5 155 aaPredicted RBP6.16□□□□□ -1.42
VCAN-207ENST00000507162 RFWD2Q8NHY2 731 aa6.16□□□□□ -1.42
VCAN-207ENST00000507162 LINC01006Q8NI28 216 aa6.16□□□□□ -1.42
VCAN-207ENST00000507162 GPR151Q8TDV0 419 aa6.16□□□□□ -1.42
VCAN-207ENST00000507162 TRPC4APQ8TEL6 797 aa6.16□□□□□ -1.42
VCAN-207ENST00000507162 PIK3R3Q92569 461 aa6.16□□□□□ -1.42
VCAN-207ENST00000507162 DNAJA3Q96EY1 480 aa6.16□□□□□ -1.42
VCAN-207ENST00000507162 CERS2Q96G23 380 aa6.16□□□□□ -1.42
VCAN-207ENST00000507162 DERL2Q9GZP9 239 aa6.16□□□□□ -1.42
VCAN-207ENST00000507162 ZNF442Q9H7R0 627 aa6.16□□□□□ -1.42
VCAN-207ENST00000507162 SEC61A2Q9H9S3 476 aa6.16□□□□□ -1.42
VCAN-207ENST00000507162 C3orf14Q9HBI5 128 aa6.16□□□□□ -1.42
VCAN-207ENST00000507162 HHATLQ9HCP6 504 aa6.16□□□□□ -1.42
VCAN-207ENST00000507162 MMP26Q9NRE1 261 aa6.16□□□□□ -1.42
VCAN-207ENST00000507162 GIMAP4Q9NUV9 329 aa6.16□□□□□ -1.42
VCAN-207ENST00000507162 UBAP1Q9NZ09 502 aa6.16□□□□□ -1.42
VCAN-207ENST00000507162 MALT1Q9UDY8 824 aa6.16□□□□□ -1.42
VCAN-207ENST00000507162 ADAM29Q9UKF5 820 aa6.16□□□□□ -1.42
VCAN-207ENST00000507162 RNF11Q9Y3C5 154 aa6.16□□□□□ -1.42
VCAN-207ENST00000507162 DOCK11Q5JSL3 2073 aa6.15□□□□□ -1.42
VCAN-207ENST00000507162 CCDC151A5D8V7 595 aa6.15□□□□□ -1.42
VCAN-207ENST00000507162 SUPT3HB4E1H0 165 aa6.15□□□□□ -1.42
VCAN-207ENST00000507162 C3orf84H3BNL1 204 aa6.15□□□□□ -1.42
VCAN-207ENST00000507162 SULT2B1O00204 365 aa6.15□□□□□ -1.42
VCAN-207ENST00000507162 GPR171O14626 319 aa6.15□□□□□ -1.42
VCAN-207ENST00000507162 SUPT3HO75486 399 aa6.15□□□□□ -1.42
VCAN-207ENST00000507162 SEMA3DO95025 777 aa6.15□□□□□ -1.42
VCAN-207ENST00000507162 GSNP06396 782 aa6.15□□□□□ -1.42
VCAN-207ENST00000507162 NAT2P11245 290 aa6.15□□□□□ -1.42
VCAN-207ENST00000507162 MPGP29372 298 aa6.15□□□□□ -1.42
VCAN-207ENST00000507162 MPIP34949 423 aa6.15□□□□□ -1.42
VCAN-207ENST00000507162 GP5P40197 560 aa6.15□□□□□ -1.42
VCAN-207ENST00000507162 MAGEA6P43360 314 aa6.15□□□□□ -1.42
VCAN-207ENST00000507162 DIO1P49895 249 aa6.15□□□□□ -1.42
VCAN-207ENST00000507162 PROK1P58294 105 aa6.15□□□□□ -1.42
VCAN-207ENST00000507162 DAG1Q14118 895 aa6.15□□□□□ -1.42
VCAN-207ENST00000507162 MAD2L1BPQ15013 274 aaPredicted RBP6.15□□□□□ -1.42
VCAN-207ENST00000507162 ALKBH6Q3KRA9 238 aa6.15□□□□□ -1.42
VCAN-207ENST00000507162 TBRG1Q3YBR2 411 aa6.15□□□□□ -1.42
VCAN-207ENST00000507162 HP1BP3Q5SSJ5 553 aaPredicted RBP6.15□□□□□ -1.42
VCAN-207ENST00000507162 TSPO2Q5TGU0 170 aa6.15□□□□□ -1.42
VCAN-207ENST00000507162 TTC19Q6DKK2 380 aaPredicted RBP6.15□□□□□ -1.42
VCAN-207ENST00000507162 DRICH1Q6PGQ1 229 aaPredicted RBP6.15□□□□□ -1.42
VCAN-207ENST00000507162 COMMD6Q7Z4G1 85 aa6.15□□□□□ -1.42
VCAN-207ENST00000507162 GALNT7Q86SF2 657 aa6.15□□□□□ -1.42
VCAN-207ENST00000507162 MTDHQ86UE4 582 aaKnown RBP6.15□□□□□ -1.42
VCAN-207ENST00000507162 CCDC103Q8IW40 242 aa6.15□□□□□ -1.42
VCAN-207ENST00000507162 FAM9CQ8IZT9 166 aa6.15□□□□□ -1.42
VCAN-207ENST00000507162 METTL4Q8N3J2 472 aa6.15□□□□□ -1.42
VCAN-207ENST00000507162 TMCO5AQ8N6Q1 288 aa6.15□□□□□ -1.42
VCAN-207ENST00000507162 PDPRQ8NCN5 879 aa6.15□□□□□ -1.42
VCAN-207ENST00000507162 DEFB108BQ8NET1 73 aa6.15□□□□□ -1.42
VCAN-207ENST00000507162 OR52E2Q8NGJ4 325 aa6.15□□□□□ -1.42
VCAN-207ENST00000507162 WDR20Q8TBZ3 569 aa6.15□□□□□ -1.42
VCAN-207ENST00000507162 ARL8AQ96BM9 186 aa6.15□□□□□ -1.42
VCAN-207ENST00000507162 CFAP36Q96G28 342 aa6.15□□□□□ -1.42
VCAN-207ENST00000507162 HES6Q96HZ4 224 aa6.15□□□□□ -1.42
VCAN-207ENST00000507162 SYT3Q9BQG1 590 aa6.15□□□□□ -1.42
VCAN-207ENST00000507162 OCSTAMPQ9BR26 566 aa6.15□□□□□ -1.42
VCAN-207ENST00000507162 MRI1Q9BV20 369 aa6.15□□□□□ -1.42
VCAN-207ENST00000507162 MRPL37Q9BZE1 423 aaKnown RBP6.15□□□□□ -1.42
VCAN-207ENST00000507162 LACRTQ9GZZ8 138 aa6.15□□□□□ -1.42
VCAN-207ENST00000507162 MARCH7Q9H992 704 aa6.15□□□□□ -1.42
VCAN-207ENST00000507162 SLC6A13Q9NSD5 602 aa6.15□□□□□ -1.42
VCAN-207ENST00000507162 TMEM45AQ9NWC5 275 aa6.15□□□□□ -1.42
VCAN-207ENST00000507162 PARPBPQ9NWS1 579 aa6.15□□□□□ -1.42
VCAN-207ENST00000507162 SEC14L4Q9UDX3 406 aa6.15□□□□□ -1.42
VCAN-207ENST00000507162 FZR1Q9UM11 496 aa6.15□□□□□ -1.42
VCAN-207ENST00000507162 PSAT1Q9Y617 370 aa6.15□□□□□ -1.42
VCAN-207ENST00000507162 PCLOQ9Y6V0 5065 aa6.14□□□□□ -1.43
VCAN-207ENST00000507162 IGKV3D-15A0A087WSY6 115 aa6.14□□□□□ -1.43
VCAN-207ENST00000507162 A0A096LPE4 126 aa6.14□□□□□ -1.43
VCAN-207ENST00000507162 A0A1W2PPZ6 126 aa6.14□□□□□ -1.43
VCAN-207ENST00000507162 ISPDA4D126 451 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms