RNA–Protein interactions for RNA: ENST00000506941.1

NPHP4-210, Transcript of nephrocystin 4, humanhuman

TSL 4

Gene NPHP4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-210ENST00000506941 FITM2Q8N6M3 262 aa16.33■□□□□ 0.2
NPHP4-210ENST00000506941 CCDC197Q8NCU1 140 aa16.33■□□□□ 0.2
NPHP4-210ENST00000506941 ATP6V1C2Q8NEY4 427 aa16.33■□□□□ 0.2
NPHP4-210ENST00000506941 OR10D3Q8NH80 312 aa16.33■□□□□ 0.2
NPHP4-210ENST00000506941 FIG4Q92562 907 aa16.33■□□□□ 0.2
NPHP4-210ENST00000506941 TAMM41Q96BW9 452 aa16.33■□□□□ 0.2
NPHP4-210ENST00000506941 KLHL15Q96M94 604 aa16.33■□□□□ 0.2
NPHP4-210ENST00000506941 WFDC6Q9BQY6 131 aa16.33■□□□□ 0.2
NPHP4-210ENST00000506941 PINK1Q9BXM7 581 aa16.33■□□□□ 0.2
NPHP4-210ENST00000506941 COQ10BQ9H8M1 238 aa16.33■□□□□ 0.2
NPHP4-210ENST00000506941 STOML1Q9UBI4 398 aa16.33■□□□□ 0.2
NPHP4-210ENST00000506941 FLNBO75369 2602 aaKnown RBP16.33■□□□□ 0.2
NPHP4-210ENST00000506941 CELSR2Q9HCU4 2923 aa16.32■□□□□ 0.2
NPHP4-210ENST00000506941 M0QX08 132 aa16.32■□□□□ 0.2
NPHP4-210ENST00000506941 SERPINB7O75635 380 aa16.32■□□□□ 0.2
NPHP4-210ENST00000506941 CHRNB4P30926 498 aa16.32■□□□□ 0.2
NPHP4-210ENST00000506941 EIF1AXP47813 144 aaKnown RBP16.32■□□□□ 0.2
NPHP4-210ENST00000506941 ZNF136P52737 540 aa16.32■□□□□ 0.2
NPHP4-210ENST00000506941 EEFSECP57772 596 aaKnown RBP16.32■□□□□ 0.2
NPHP4-210ENST00000506941 CENPEQ02224 2701 aa16.32■□□□□ 0.2
NPHP4-210ENST00000506941 TMEM176BQ3YBM2 270 aaPredicted RBP16.32■□□□□ 0.2
NPHP4-210ENST00000506941 C3orf33Q6P1S2 294 aa16.32■□□□□ 0.2
NPHP4-210ENST00000506941 ESPNLQ6ZVH7 1005 aa16.32■□□□□ 0.2
NPHP4-210ENST00000506941 CCDC80Q76M96 950 aa16.32■□□□□ 0.2
NPHP4-210ENST00000506941 ZNF550Q7Z398 422 aa16.32■□□□□ 0.2
NPHP4-210ENST00000506941 GRINAQ7Z429 371 aa16.32■□□□□ 0.2
NPHP4-210ENST00000506941 ARPINQ7Z6K5 226 aa16.32■□□□□ 0.2
NPHP4-210ENST00000506941 ADGRG3Q86Y34 549 aa16.32■□□□□ 0.2
NPHP4-210ENST00000506941 LIX1LQ8IVB5 337 aa16.32■□□□□ 0.2
NPHP4-210ENST00000506941 SMYD1Q8NB12 490 aa16.32■□□□□ 0.2
NPHP4-210ENST00000506941 OR2V1Q8NHB1 315 aa16.32■□□□□ 0.2
NPHP4-210ENST00000506941 WNT2BQ93097 391 aa16.32■□□□□ 0.2
NPHP4-210ENST00000506941 HOPXQ9BPY8 73 aaPredicted RBP16.32■□□□□ 0.2
NPHP4-210ENST00000506941 ARMC7Q9H6L4 198 aa16.32■□□□□ 0.2
NPHP4-210ENST00000506941 COQ3Q9NZJ6 369 aa16.32■□□□□ 0.2
NPHP4-210ENST00000506941 PRORSD1PA6NEY8 169 aa16.31■□□□□ 0.2
NPHP4-210ENST00000506941 SLC22A20A6NK97 555 aa16.31■□□□□ 0.2
NPHP4-210ENST00000506941 CXCL13O43927 109 aa16.31■□□□□ 0.2
NPHP4-210ENST00000506941 CLDN14O95500 239 aa16.31■□□□□ 0.2
NPHP4-210ENST00000506941 CD247P20963 164 aa16.31■□□□□ 0.2
NPHP4-210ENST00000506941 APOBEC1P41238 236 aaKnown RBP16.31■□□□□ 0.2
NPHP4-210ENST00000506941 SLC1A3P43003 542 aa16.31■□□□□ 0.2
NPHP4-210ENST00000506941 RPS3AP61247 264 aaKnown RBP16.31■□□□□ 0.2
NPHP4-210ENST00000506941 PSME3P61289 254 aa16.31■□□□□ 0.2
NPHP4-210ENST00000506941 LIPEQ05469 1076 aa16.31■□□□□ 0.2
NPHP4-210ENST00000506941 PON3Q15166 354 aa16.31■□□□□ 0.2
NPHP4-210ENST00000506941 DUSP7Q16829 419 aa16.31■□□□□ 0.2
NPHP4-210ENST00000506941 INTS11Q5TA45 600 aaKnown RBP16.31■□□□□ 0.2
NPHP4-210ENST00000506941 HBMQ6B0K9 141 aa16.31■□□□□ 0.2
NPHP4-210ENST00000506941 ERICH5Q6P6B1 374 aa16.31■□□□□ 0.2
NPHP4-210ENST00000506941 CHMP1BQ7LBR1 199 aa16.31■□□□□ 0.2
NPHP4-210ENST00000506941 PATL1Q86TB9 770 aaKnown RBP16.31■□□□□ 0.2
NPHP4-210ENST00000506941 MICU2Q8IYU8 434 aa16.31■□□□□ 0.2
NPHP4-210ENST00000506941 OR2T12Q8NG77 320 aa16.31■□□□□ 0.2
NPHP4-210ENST00000506941 GPR32P1Q8NGA4 272 aa16.31■□□□□ 0.2
NPHP4-210ENST00000506941 FNDC9Q8TBE3 224 aa16.31■□□□□ 0.2
NPHP4-210ENST00000506941 ASB5Q8WWX0 329 aa16.31■□□□□ 0.2
NPHP4-210ENST00000506941 SLC35B4Q969S0 331 aa16.31■□□□□ 0.2
NPHP4-210ENST00000506941 SRXN1Q9BYN0 137 aa16.31■□□□□ 0.2
NPHP4-210ENST00000506941 ADAM19Q9H013 955 aa16.31■□□□□ 0.2
NPHP4-210ENST00000506941 ABCD2Q9UBJ2 740 aa16.31■□□□□ 0.2
NPHP4-210ENST00000506941 CHRNA9Q9UGM1 479 aa16.31■□□□□ 0.2
NPHP4-210ENST00000506941 TAGLN3Q9UI15 199 aa16.31■□□□□ 0.2
NPHP4-210ENST00000506941 OSGIN1Q9UJX0 560 aa16.31■□□□□ 0.2
NPHP4-210ENST00000506941 DCHS2Q6V1P9 2916 aa16.31■□□□□ 0.2
NPHP4-210ENST00000506941 FREM1Q5H8C1 2179 aa16.3■□□□□ 0.2
NPHP4-210ENST00000506941 TMED7-TICAM2A0A0A6YYA0 188 aa16.3■□□□□ 0.2
NPHP4-210ENST00000506941 A0A1W2PNR3 127 aa16.3■□□□□ 0.2
NPHP4-210ENST00000506941 HSPB2A8KAH6 182 aa16.3■□□□□ 0.2
NPHP4-210ENST00000506941 AQP8O94778 261 aa16.3■□□□□ 0.2
NPHP4-210ENST00000506941 IL2RAP01589 272 aa16.3■□□□□ 0.2
NPHP4-210ENST00000506941 UQCRBP14927 111 aa16.3■□□□□ 0.2
NPHP4-210ENST00000506941 HTR2AP28223 471 aa16.3■□□□□ 0.2
NPHP4-210ENST00000506941 TACR3P29371 465 aa16.3■□□□□ 0.2
NPHP4-210ENST00000506941 POLR2HP52434 150 aaKnown RBP16.3■□□□□ 0.2
NPHP4-210ENST00000506941 FOXF2Q12947 444 aa16.3■□□□□ 0.2
NPHP4-210ENST00000506941 VEZF1Q14119 521 aa16.3■□□□□ 0.2
NPHP4-210ENST00000506941 HSPB2Q16082 182 aa16.3■□□□□ 0.2
NPHP4-210ENST00000506941 WBP2NLQ6ICG8 309 aa16.3■□□□□ 0.2
NPHP4-210ENST00000506941 MAMDC2Q7Z304 686 aaPredicted RBP16.3■□□□□ 0.2
NPHP4-210ENST00000506941 GCNT2Q8N0V5 402 aa16.3■□□□□ 0.2
NPHP4-210ENST00000506941 CADM2Q8N3J6 435 aa16.3■□□□□ 0.2
NPHP4-210ENST00000506941 LILRB4Q8NHJ6 448 aa16.3■□□□□ 0.2
NPHP4-210ENST00000506941 CA5BP1Q8WTZ4 195 aa16.3■□□□□ 0.2
NPHP4-210ENST00000506941 TM9SF2Q99805 663 aa16.3■□□□□ 0.2
NPHP4-210ENST00000506941 PRR14Q9BWN1 585 aa16.3■□□□□ 0.2
NPHP4-210ENST00000506941 UCK2Q9BZX2 261 aa16.3■□□□□ 0.2
NPHP4-210ENST00000506941 OR11A1Q9GZK7 315 aa16.3■□□□□ 0.2
NPHP4-210ENST00000506941 PLEKHB1Q9UF11 243 aaPredicted RBP16.3■□□□□ 0.2
NPHP4-210ENST00000506941 TMED7Q9Y3B3 224 aa16.3■□□□□ 0.2
NPHP4-210ENST00000506941 ZNF175Q9Y473 711 aa16.3■□□□□ 0.2
NPHP4-210ENST00000506941 TMEM72A0PK05 275 aa16.29■□□□□ 0.2
NPHP4-210ENST00000506941 ELOVL7A1L3X0 281 aa16.29■□□□□ 0.2
NPHP4-210ENST00000506941 NKX2-6A6NCS4 301 aa16.29■□□□□ 0.2
NPHP4-210ENST00000506941 GJE1A6NN92 205 aa16.29■□□□□ 0.2
NPHP4-210ENST00000506941 FAM90A27PA6NNH2 459 aa16.29■□□□□ 0.2
NPHP4-210ENST00000506941 NDUFAB1O14561 156 aa16.29■□□□□ 0.2
NPHP4-210ENST00000506941 RCBTB2O95199 551 aa16.29■□□□□ 0.2
NPHP4-210ENST00000506941 CCNA2P20248 432 aa16.29■□□□□ 0.2
NPHP4-210ENST00000506941 GRNP28799 593 aaKnown RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms