RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 KLHL15Q96M94 604 aa11.77□□□□□ -0.53
TCOF1-209ENST00000506630 ANKRD27Q96NW4 1050 aa11.77□□□□□ -0.53
TCOF1-209ENST00000506630 PRRG4Q9BZD6 226 aa11.77□□□□□ -0.53
TCOF1-209ENST00000506630 PAQR5Q9NXK6 330 aaPredicted RBP11.77□□□□□ -0.53
TCOF1-209ENST00000506630 ARMCX1Q9P291 453 aa11.77□□□□□ -0.53
TCOF1-209ENST00000506630 ZNF629Q9UEG4 869 aaPredicted RBP11.77□□□□□ -0.53
TCOF1-209ENST00000506630 MCTS1Q9ULC4 181 aaKnown RBP11.77□□□□□ -0.53
TCOF1-209ENST00000506630 CAPN7Q9Y6W3 813 aa11.77□□□□□ -0.53
TCOF1-209ENST00000506630 FREM1Q5H8C1 2179 aa11.77□□□□□ -0.53
TCOF1-209ENST00000506630 A0A0J9YW62 118 aa11.76□□□□□ -0.53
TCOF1-209ENST00000506630 BBIP1A8MTZ0 92 aa11.76□□□□□ -0.53
TCOF1-209ENST00000506630 FBP2O00757 339 aa11.76□□□□□ -0.53
TCOF1-209ENST00000506630 EFNA2O43921 213 aa11.76□□□□□ -0.53
TCOF1-209ENST00000506630 CXCL13O43927 109 aa11.76□□□□□ -0.53
TCOF1-209ENST00000506630 DNAJA2O60884 412 aa11.76□□□□□ -0.53
TCOF1-209ENST00000506630 SYNGR4O95473 234 aa11.76□□□□□ -0.53
TCOF1-209ENST00000506630 PABPC4LP0CB38 370 aaKnown RBP11.76□□□□□ -0.53
TCOF1-209ENST00000506630 FCGR2AP12318 317 aa11.76□□□□□ -0.53
TCOF1-209ENST00000506630 FOSL1P15407 271 aa11.76□□□□□ -0.53
TCOF1-209ENST00000506630 GPX2P18283 190 aa11.76□□□□□ -0.53
TCOF1-209ENST00000506630 SLC7A1P30825 629 aa11.76□□□□□ -0.53
TCOF1-209ENST00000506630 OPRM1P35372 400 aa11.76□□□□□ -0.53
TCOF1-209ENST00000506630 ASCL1P50553 236 aa11.76□□□□□ -0.53
TCOF1-209ENST00000506630 SEC24CP53992 1094 aa11.76□□□□□ -0.53
TCOF1-209ENST00000506630 SESN3P58005 492 aa11.76□□□□□ -0.53
TCOF1-209ENST00000506630 CDK6Q00534 326 aa11.76□□□□□ -0.53
TCOF1-209ENST00000506630 SCARB2Q14108 478 aa11.76□□□□□ -0.53
TCOF1-209ENST00000506630 SELPLGQ14242 412 aa11.76□□□□□ -0.53
TCOF1-209ENST00000506630 CAPRIN1Q14444 709 aaKnown RBP11.76□□□□□ -0.53
TCOF1-209ENST00000506630 CYP51A1Q16850 503 aa11.76□□□□□ -0.53
TCOF1-209ENST00000506630 TRMT5Q32P41 509 aaKnown RBP11.76□□□□□ -0.53
TCOF1-209ENST00000506630 TMEM176BQ3YBM2 270 aaPredicted RBP11.76□□□□□ -0.53
TCOF1-209ENST00000506630 ZNF311Q5JNZ3 666 aa11.76□□□□□ -0.53
TCOF1-209ENST00000506630 RNF220Q5VTB9 566 aa11.76□□□□□ -0.53
TCOF1-209ENST00000506630 OR2A2Q6IF42 318 aa11.76□□□□□ -0.53
TCOF1-209ENST00000506630 REEP3Q6NUK4 255 aa11.76□□□□□ -0.53
TCOF1-209ENST00000506630 C3orf33Q6P1S2 294 aa11.76□□□□□ -0.53
TCOF1-209ENST00000506630 PLEKHM3Q6ZWE6 761 aa11.76□□□□□ -0.53
TCOF1-209ENST00000506630 SPATA21Q7Z572 469 aa11.76□□□□□ -0.53
TCOF1-209ENST00000506630 SNX32Q86XE0 403 aa11.76□□□□□ -0.53
TCOF1-209ENST00000506630 CNEP1R1Q8N9A8 125 aa11.76□□□□□ -0.53
TCOF1-209ENST00000506630 ELAC2Q9BQ52 826 aaKnown RBP11.76□□□□□ -0.53
TCOF1-209ENST00000506630 SFXN3Q9BWM7 321 aa11.76□□□□□ -0.53
TCOF1-209ENST00000506630 SERINC1Q9NRX5 453 aa11.76□□□□□ -0.53
TCOF1-209ENST00000506630 ACER3Q9NUN7 267 aa11.76□□□□□ -0.53
TCOF1-209ENST00000506630 RLIMQ9NVW2 624 aa11.76□□□□□ -0.53
TCOF1-209ENST00000506630 ZNF232Q9UNY5 417 aa11.76□□□□□ -0.53
TCOF1-209ENST00000506630 ANGPT4Q9Y264 503 aa11.76□□□□□ -0.53
TCOF1-209ENST00000506630 ZNF175Q9Y473 711 aa11.76□□□□□ -0.53
TCOF1-209ENST00000506630 GMEB1Q9Y692 573 aa11.76□□□□□ -0.53
TCOF1-209ENST00000506630 NIPBLQ6KC79 2804 aaeCLIP11.75□□□□□ -0.53
TCOF1-209ENST00000506630 LOC100653049A0A140TA62 436 aa11.75□□□□□ -0.53
TCOF1-209ENST00000506630 CDHR4A6H8M9 788 aa11.75□□□□□ -0.53
TCOF1-209ENST00000506630 CFAP73A6NFT4 308 aa11.75□□□□□ -0.53
TCOF1-209ENST00000506630 ETV2O00321 342 aaPredicted RBP11.75□□□□□ -0.53
TCOF1-209ENST00000506630 AP3D1O14617 1153 aa11.75□□□□□ -0.53
TCOF1-209ENST00000506630 MRASO14807 208 aa11.75□□□□□ -0.53
TCOF1-209ENST00000506630 ADAMDEC1O15204 470 aa11.75□□□□□ -0.53
TCOF1-209ENST00000506630 ADAM11O75078 769 aa11.75□□□□□ -0.53
TCOF1-209ENST00000506630 KRT34O76011 436 aa11.75□□□□□ -0.53
TCOF1-209ENST00000506630 PGM3O95394 542 aa11.75□□□□□ -0.53
TCOF1-209ENST00000506630 NTN1O95631 604 aa11.75□□□□□ -0.53
TCOF1-209ENST00000506630 IL18BPO95998 194 aa11.75□□□□□ -0.53
TCOF1-209ENST00000506630 THBS1P07996 1170 aa11.75□□□□□ -0.53
TCOF1-209ENST00000506630 GKN3PP0CG01 181 aa11.75□□□□□ -0.53
TCOF1-209ENST00000506630 UQCRBP14927 111 aa11.75□□□□□ -0.53
TCOF1-209ENST00000506630 SLC6A2P23975 617 aa11.75□□□□□ -0.53
TCOF1-209ENST00000506630 ADSLP30566 484 aaPredicted RBP11.75□□□□□ -0.53
TCOF1-209ENST00000506630 LSP1P33241 339 aa11.75□□□□□ -0.53
TCOF1-209ENST00000506630 IDH2P48735 452 aaKnown RBP11.75□□□□□ -0.53
TCOF1-209ENST00000506630 GNGT1P63211 74 aa11.75□□□□□ -0.53
TCOF1-209ENST00000506630 EEF1A1P68104 462 aaKnown RBP11.75□□□□□ -0.53
TCOF1-209ENST00000506630 SIRPAP78324 504 aa11.75□□□□□ -0.53
TCOF1-209ENST00000506630 EPS8Q12929 822 aa11.75□□□□□ -0.53
TCOF1-209ENST00000506630 SNTB1Q13884 538 aaKnown RBP11.75□□□□□ -0.53
TCOF1-209ENST00000506630 GRINAQ7Z429 371 aa11.75□□□□□ -0.53
TCOF1-209ENST00000506630 CPLX4Q7Z7G2 160 aa11.75□□□□□ -0.53
TCOF1-209ENST00000506630 ZNF440Q8IYI8 595 aa11.75□□□□□ -0.53
TCOF1-209ENST00000506630 POU5F2Q8N7G0 328 aa11.75□□□□□ -0.53
TCOF1-209ENST00000506630 LRRC46Q96FV0 321 aa11.75□□□□□ -0.53
TCOF1-209ENST00000506630 SLC39A3Q9BRY0 314 aa11.75□□□□□ -0.53
TCOF1-209ENST00000506630 SPATA9Q9BWV2 254 aa11.75□□□□□ -0.53
TCOF1-209ENST00000506630 POLDIP3Q9BY77 421 aaKnown RBP11.75□□□□□ -0.53
TCOF1-209ENST00000506630 TMEM38AQ9H6F2 299 aa11.75□□□□□ -0.53
TCOF1-209ENST00000506630 ARMC7Q9H6L4 198 aa11.75□□□□□ -0.53
TCOF1-209ENST00000506630 COQ10BQ9H8M1 238 aa11.75□□□□□ -0.53
TCOF1-209ENST00000506630 BCL2L10Q9HD36 194 aa11.75□□□□□ -0.53
TCOF1-209ENST00000506630 CTPS2Q9NRF8 586 aa11.75□□□□□ -0.53
TCOF1-209ENST00000506630 IFT52Q9Y366 437 aa11.75□□□□□ -0.53
TCOF1-209ENST00000506630 SPIN1Q9Y657 262 aaPredicted RBP11.75□□□□□ -0.53
TCOF1-209ENST00000506630 A0A1W2PNR3 127 aa11.74□□□□□ -0.53
TCOF1-209ENST00000506630 A0A1W2PNV4 684 aa11.74□□□□□ -0.53
TCOF1-209ENST00000506630 SLC22A2O15244 555 aa11.74□□□□□ -0.53
TCOF1-209ENST00000506630 CCDC22O60826 627 aa11.74□□□□□ -0.53
TCOF1-209ENST00000506630 AQP8O94778 261 aa11.74□□□□□ -0.53
TCOF1-209ENST00000506630 PLGP00747 810 aaPredicted RBP11.74□□□□□ -0.53
TCOF1-209ENST00000506630 ETS2P15036 469 aa11.74□□□□□ -0.53
TCOF1-209ENST00000506630 DNASE1P24855 282 aa11.74□□□□□ -0.53
TCOF1-209ENST00000506630 AQP1P29972 269 aa11.74□□□□□ -0.53
TCOF1-209ENST00000506630 UQCRC1P31930 480 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms