RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 ETFAP13804 333 aa14.86□□□□□ -0.03
PDLIM7-215ENST00000506161 KCNJ10P78508 379 aa14.86□□□□□ -0.03
PDLIM7-215ENST00000506161 MERTKQ12866 999 aa14.86□□□□□ -0.03
PDLIM7-215ENST00000506161 KEAP1Q14145 624 aa14.86□□□□□ -0.03
PDLIM7-215ENST00000506161 RPS26P11Q5JNZ5 115 aaPredicted RBP14.86□□□□□ -0.03
PDLIM7-215ENST00000506161 PDSS1Q5T2R2 415 aa14.86□□□□□ -0.03
PDLIM7-215ENST00000506161 EPGNQ6UW88 154 aa14.86□□□□□ -0.03
PDLIM7-215ENST00000506161 EIF3MQ7L2H7 374 aaKnown RBP14.86□□□□□ -0.03
PDLIM7-215ENST00000506161 ADGRG3Q86Y34 549 aa14.86□□□□□ -0.03
PDLIM7-215ENST00000506161 KIRREL3Q8IZU9 778 aa14.86□□□□□ -0.03
PDLIM7-215ENST00000506161 C10orf111Q8N326 155 aa14.86□□□□□ -0.03
PDLIM7-215ENST00000506161 VPS37AQ8NEZ2 397 aa14.86□□□□□ -0.03
PDLIM7-215ENST00000506161 ST8SIA1Q92185 356 aa14.86□□□□□ -0.03
PDLIM7-215ENST00000506161 POLE3Q9NRF9 147 aa14.86□□□□□ -0.03
PDLIM7-215ENST00000506161 SDR39U1Q9NRG7 319 aaPredicted RBP14.86□□□□□ -0.03
PDLIM7-215ENST00000506161 USH1CQ9Y6N9 552 aa14.86□□□□□ -0.03
PDLIM7-215ENST00000506161 AGAP5A6NIR3 686 aa14.85□□□□□ -0.03
PDLIM7-215ENST00000506161 SLC22A3O75751 556 aa14.85□□□□□ -0.03
PDLIM7-215ENST00000506161 GOSR1O95249 250 aa14.85□□□□□ -0.03
PDLIM7-215ENST00000506161 FESP07332 822 aa14.85□□□□□ -0.03
PDLIM7-215ENST00000506161 NUDT7P0C024 238 aa14.85□□□□□ -0.03
PDLIM7-215ENST00000506161 CCNA2P20248 432 aa14.85□□□□□ -0.03
PDLIM7-215ENST00000506161 HOXC12P31275 282 aa14.85□□□□□ -0.03
PDLIM7-215ENST00000506161 DIO1P49895 249 aa14.85□□□□□ -0.03
PDLIM7-215ENST00000506161 RAC3P60763 192 aa14.85□□□□□ -0.03
PDLIM7-215ENST00000506161 ATAD3BQ5T9A4 648 aa14.85□□□□□ -0.03
PDLIM7-215ENST00000506161 C3orf33Q6P1S2 294 aa14.85□□□□□ -0.03
PDLIM7-215ENST00000506161 VRK2Q86Y07 508 aa14.85□□□□□ -0.03
PDLIM7-215ENST00000506161 WFDC8Q8IUA0 241 aa14.85□□□□□ -0.03
PDLIM7-215ENST00000506161 FUNDC1Q8IVP5 155 aa14.85□□□□□ -0.03
PDLIM7-215ENST00000506161 ACTR6Q9GZN1 396 aa14.85□□□□□ -0.03
PDLIM7-215ENST00000506161 UBTD1Q9HAC8 227 aa14.85□□□□□ -0.03
PDLIM7-215ENST00000506161 GLRX2Q9NS18 164 aa14.85□□□□□ -0.03
PDLIM7-215ENST00000506161 RLIMQ9NVW2 624 aa14.85□□□□□ -0.03
PDLIM7-215ENST00000506161 TMEM72A0PK05 275 aa14.84□□□□□ -0.03
PDLIM7-215ENST00000506161 ZC3H12DA2A288 527 aaKnown RBP14.84□□□□□ -0.03
PDLIM7-215ENST00000506161 RFXANKO14593 260 aa14.84□□□□□ -0.03
PDLIM7-215ENST00000506161 CYTIPO60759 359 aa14.84□□□□□ -0.03
PDLIM7-215ENST00000506161 PRKD3O94806 890 aa14.84□□□□□ -0.03
PDLIM7-215ENST00000506161 AGR2O95994 175 aa14.84□□□□□ -0.03
PDLIM7-215ENST00000506161 IDO1P14902 403 aa14.84□□□□□ -0.03
PDLIM7-215ENST00000506161 PGCP20142 388 aa14.84□□□□□ -0.03
PDLIM7-215ENST00000506161 SLC7A1P30825 629 aa14.84□□□□□ -0.03
PDLIM7-215ENST00000506161 SYT14P1Q58G82 188 aa14.84□□□□□ -0.03
PDLIM7-215ENST00000506161 MRPL2Q5T653 305 aaKnown RBP14.84□□□□□ -0.03
PDLIM7-215ENST00000506161 ABLIM2Q6H8Q1 611 aa14.84□□□□□ -0.03
PDLIM7-215ENST00000506161 SLC2A7Q6PXP3 512 aa14.84□□□□□ -0.03
PDLIM7-215ENST00000506161 ZNF836Q6ZNA1 936 aa14.84□□□□□ -0.03
PDLIM7-215ENST00000506161 LRRC74BQ6ZQY2 392 aa14.84□□□□□ -0.03
PDLIM7-215ENST00000506161 TMPPEQ6ZT21 453 aa14.84□□□□□ -0.03
PDLIM7-215ENST00000506161 BIVMQ86UB2 503 aa14.84□□□□□ -0.03
PDLIM7-215ENST00000506161 MSRB3Q8IXL7 192 aa14.84□□□□□ -0.03
PDLIM7-215ENST00000506161 IGFBPL1Q8WX77 278 aa14.84□□□□□ -0.03
PDLIM7-215ENST00000506161 S100PBPQ96BU1 408 aa14.84□□□□□ -0.03
PDLIM7-215ENST00000506161 TRNT1Q96Q11 434 aaKnown RBP14.84□□□□□ -0.03
PDLIM7-215ENST00000506161 SMR3AQ99954 134 aa14.84□□□□□ -0.03
PDLIM7-215ENST00000506161 PAIP1Q9H074 479 aaKnown RBP14.84□□□□□ -0.03
PDLIM7-215ENST00000506161 BCO1Q9HAY6 547 aa14.84□□□□□ -0.03
PDLIM7-215ENST00000506161 SLC52A3Q9NQ40 469 aa14.84□□□□□ -0.03
PDLIM7-215ENST00000506161 ZNF226Q9NYT6 803 aa14.84□□□□□ -0.03
PDLIM7-215ENST00000506161 ZIM2Q9NZV7 527 aa14.84□□□□□ -0.03
PDLIM7-215ENST00000506161 SLAMF8Q9P0V8 285 aa14.84□□□□□ -0.03
PDLIM7-215ENST00000506161 SLC35A3Q9Y2D2 325 aa14.84□□□□□ -0.03
PDLIM7-215ENST00000506161 DSPPQ9NZW4 1301 aa14.84□□□□□ -0.03
PDLIM7-215ENST00000506161 ARID1AO14497 2285 aa14.83□□□□□ -0.03
PDLIM7-215ENST00000506161 CADP27708 2225 aa14.83□□□□□ -0.04
PDLIM7-215ENST00000506161 ZNF716A6NP11 495 aa14.83□□□□□ -0.04
PDLIM7-215ENST00000506161 UBDO15205 165 aa14.83□□□□□ -0.04
PDLIM7-215ENST00000506161 ADAP00813 363 aa14.83□□□□□ -0.04
PDLIM7-215ENST00000506161 YES1P07947 543 aa14.83□□□□□ -0.04
PDLIM7-215ENST00000506161 GKN3PP0CG01 181 aa14.83□□□□□ -0.04
PDLIM7-215ENST00000506161 IMPDH2P12268 514 aa14.83□□□□□ -0.04
PDLIM7-215ENST00000506161 PSMB1P20618 241 aaKnown RBP14.83□□□□□ -0.04
PDLIM7-215ENST00000506161 IDH2P48735 452 aaKnown RBP14.83□□□□□ -0.04
PDLIM7-215ENST00000506161 IDH3AP50213 366 aa14.83□□□□□ -0.04
PDLIM7-215ENST00000506161 POLR2JP52435 117 aaKnown RBP14.83□□□□□ -0.04
PDLIM7-215ENST00000506161 FOXG1P55316 489 aaPredicted RBP14.83□□□□□ -0.04
PDLIM7-215ENST00000506161 RNPS1Q15287 305 aaKnown RBP14.83□□□□□ -0.04
PDLIM7-215ENST00000506161 TMEM201Q5SNT2 666 aa14.83□□□□□ -0.04
PDLIM7-215ENST00000506161 BEND4Q6ZU67 534 aa14.83□□□□□ -0.04
PDLIM7-215ENST00000506161 Q71RC1 249 aaPredicted RBP14.83□□□□□ -0.04
PDLIM7-215ENST00000506161 GLB1L3Q8NCI6 653 aaPredicted RBP14.83□□□□□ -0.04
PDLIM7-215ENST00000506161 LILRB1Q8NHL6 650 aaPredicted RBP14.83□□□□□ -0.04
PDLIM7-215ENST00000506161 ZNF563Q8TA94 476 aa14.83□□□□□ -0.04
PDLIM7-215ENST00000506161 WDR60Q8WVS4 1066 aa14.83□□□□□ -0.04
PDLIM7-215ENST00000506161 GTF2H4Q92759 462 aa14.83□□□□□ -0.04
PDLIM7-215ENST00000506161 ATP6V1G3Q96LB4 118 aa14.83□□□□□ -0.04
PDLIM7-215ENST00000506161 MDFIQ99750 246 aa14.83□□□□□ -0.04
PDLIM7-215ENST00000506161 EXOSC3Q9NQT5 275 aaKnown RBP14.83□□□□□ -0.04
PDLIM7-215ENST00000506161 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.83□□□□□ -0.04
PDLIM7-215ENST00000506161 SLC25A37Q9NYZ2 338 aa14.83□□□□□ -0.04
PDLIM7-215ENST00000506161 CHRNA9Q9UGM1 479 aa14.83□□□□□ -0.04
PDLIM7-215ENST00000506161 OSGIN1Q9UJX0 560 aa14.83□□□□□ -0.04
PDLIM7-215ENST00000506161 MAP1AP78559 2803 aaPredicted RBP14.83□□□□□ -0.04
PDLIM7-215ENST00000506161 GJE1A6NN92 205 aa14.82□□□□□ -0.04
PDLIM7-215ENST00000506161 SLCO1B7G3V0H7 640 aa14.82□□□□□ -0.04
PDLIM7-215ENST00000506161 BCHEP06276 602 aa14.82□□□□□ -0.04
PDLIM7-215ENST00000506161 TFPTP0C1Z6 253 aa14.82□□□□□ -0.04
PDLIM7-215ENST00000506161 ZCCHC18P0CG32 403 aa14.82□□□□□ -0.04
PDLIM7-215ENST00000506161 PRG2P13727 222 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms